Loading…

Application of Time-Dependent Density Functional and Natural Bond Orbital Theories to the UV–vis Absorption Spectra of Some Phenolic Compounds

The UV–vis properties of 22 natural phenolic compounds, comprising anthraquinones, neoflavonoids, and flavonoids were systematically examined. The time-dependent density functional theory (TDDFT) approach in combination with the B3LYP, B3LYP-D2, B3P86, and M06-2X functionals was used to simulate the...

Full description

Saved in:
Bibliographic Details
Published in:The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory Molecules, spectroscopy, kinetics, environment, & general theory, 2015-09, Vol.119 (35), p.9352-9362
Main Authors: Markovic, Svetlana, Tosovic, Jelena
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-a369t-b1303e7b1b437cec5156c2cd6e124d75545538c827f74025df5a8dc25590d39c3
cites cdi_FETCH-LOGICAL-a369t-b1303e7b1b437cec5156c2cd6e124d75545538c827f74025df5a8dc25590d39c3
container_end_page 9362
container_issue 35
container_start_page 9352
container_title The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory
container_volume 119
creator Markovic, Svetlana
Tosovic, Jelena
description The UV–vis properties of 22 natural phenolic compounds, comprising anthraquinones, neoflavonoids, and flavonoids were systematically examined. The time-dependent density functional theory (TDDFT) approach in combination with the B3LYP, B3LYP-D2, B3P86, and M06-2X functionals was used to simulate the UV–vis spectra of the investigated compounds. It was shown that all methods exhibit very good (B3LYP slightly better) performance in reproducing the examined UV–vis spectra. However, the shapes of the Kohn–Sham molecular orbitals (MOs) involved in electronic transitions were misleading in constructing the MO correlation diagrams. To provide better understanding of redistribution of electron density upon excitation, the natural bond orbital (NBO) analysis was applied. Bearing in mind the spatial and energetic separations, as well as the character of the π bonding, lone pair, and π* antibonding natural localized molecular orbitals (NLMOs), the “NLMO clusters” were constructed. NLMO cluster should be understood as a part of a molecule characterized with distinguished electron density. It was shown that all absorption bands including all electronic transitions need to be inspected to fully understand the UV–vis spectrum of a certain compound, and, thus, to learn more about its UV–vis light absorption. Our investigation showed that the TDDFT and NBO theories are complementary, as the results from the two approaches can be combined to interpret the UV–vis spectra. Agreement between the predictions of the TDDFT approach and those based on the NLMO clusters is excellent in the case of major electronic transitions and long wavelengths. It should be emphasized that the approach for investigation of UV–vis light absorption based on the NLMO clusters is applied for the first time.
doi_str_mv 10.1021/acs.jpca.5b05129
format article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1770334617</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1770334617</sourcerecordid><originalsourceid>FETCH-LOGICAL-a369t-b1303e7b1b437cec5156c2cd6e124d75545538c827f74025df5a8dc25590d39c3</originalsourceid><addsrcrecordid>eNqNkc1u1DAURi0EoqWwZ4W8ZEEG_8RxshymFJAqitQp28ixbzSuEtvYTqXueAQk3pAnwdMZ2CGxuvdK5_vu4iD0kpIVJYy-VTqtboNWKzEQQVn3CJ1SwUglGBWPy07arhIN707Qs5RuCSGUs_opOmENk7Vs21P0Yx3CZLXK1jvsR7y1M1TnEMAZcBmfg0s23-OLxek9oiasnMGfVV5i2d_5clzFweZybHfgo4WEs8d5B_jm66_vP-9swush-RgePlwH0Dmq_adrPwP-sgPny3-88XPwizPpOXoyqinBi-M8QzcX77ebj9Xl1YdPm_VlpXjT5WqgnHCQAx1qLjVoQUWjmTYNUFYbKUQtBG91y-Qoa8KEGYVqjWZCdMTwTvMz9PrQG6L_tkDK_WyThmlSDvySeiol4bxuqPwPlHSSCNk1BSUHVEefUoSxD9HOKt73lPR7ZX1R1u-V9UdlJfLq2L4MM5i_gT-OCvDmADxE_RKLhfTvvt9Of6QY</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1709705796</pqid></control><display><type>article</type><title>Application of Time-Dependent Density Functional and Natural Bond Orbital Theories to the UV–vis Absorption Spectra of Some Phenolic Compounds</title><source>American Chemical Society:Jisc Collections:American Chemical Society Read &amp; Publish Agreement 2022-2024 (Reading list)</source><creator>Markovic, Svetlana ; Tosovic, Jelena</creator><creatorcontrib>Markovic, Svetlana ; Tosovic, Jelena</creatorcontrib><description>The UV–vis properties of 22 natural phenolic compounds, comprising anthraquinones, neoflavonoids, and flavonoids were systematically examined. The time-dependent density functional theory (TDDFT) approach in combination with the B3LYP, B3LYP-D2, B3P86, and M06-2X functionals was used to simulate the UV–vis spectra of the investigated compounds. It was shown that all methods exhibit very good (B3LYP slightly better) performance in reproducing the examined UV–vis spectra. However, the shapes of the Kohn–Sham molecular orbitals (MOs) involved in electronic transitions were misleading in constructing the MO correlation diagrams. To provide better understanding of redistribution of electron density upon excitation, the natural bond orbital (NBO) analysis was applied. Bearing in mind the spatial and energetic separations, as well as the character of the π bonding, lone pair, and π* antibonding natural localized molecular orbitals (NLMOs), the “NLMO clusters” were constructed. NLMO cluster should be understood as a part of a molecule characterized with distinguished electron density. It was shown that all absorption bands including all electronic transitions need to be inspected to fully understand the UV–vis spectrum of a certain compound, and, thus, to learn more about its UV–vis light absorption. Our investigation showed that the TDDFT and NBO theories are complementary, as the results from the two approaches can be combined to interpret the UV–vis spectra. Agreement between the predictions of the TDDFT approach and those based on the NLMO clusters is excellent in the case of major electronic transitions and long wavelengths. It should be emphasized that the approach for investigation of UV–vis light absorption based on the NLMO clusters is applied for the first time.</description><identifier>ISSN: 1089-5639</identifier><identifier>EISSN: 1520-5215</identifier><identifier>DOI: 10.1021/acs.jpca.5b05129</identifier><identifier>PMID: 26274788</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Absorption spectra ; Bonding ; Clusters ; Electron density ; Electronics ; Orbitals ; Phenols ; Spectra</subject><ispartof>The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, &amp; general theory, 2015-09, Vol.119 (35), p.9352-9362</ispartof><rights>Copyright © 2015 American Chemical Society</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a369t-b1303e7b1b437cec5156c2cd6e124d75545538c827f74025df5a8dc25590d39c3</citedby><cites>FETCH-LOGICAL-a369t-b1303e7b1b437cec5156c2cd6e124d75545538c827f74025df5a8dc25590d39c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,778,782,27907,27908</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26274788$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Markovic, Svetlana</creatorcontrib><creatorcontrib>Tosovic, Jelena</creatorcontrib><title>Application of Time-Dependent Density Functional and Natural Bond Orbital Theories to the UV–vis Absorption Spectra of Some Phenolic Compounds</title><title>The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, &amp; general theory</title><addtitle>J. Phys. Chem. A</addtitle><description>The UV–vis properties of 22 natural phenolic compounds, comprising anthraquinones, neoflavonoids, and flavonoids were systematically examined. The time-dependent density functional theory (TDDFT) approach in combination with the B3LYP, B3LYP-D2, B3P86, and M06-2X functionals was used to simulate the UV–vis spectra of the investigated compounds. It was shown that all methods exhibit very good (B3LYP slightly better) performance in reproducing the examined UV–vis spectra. However, the shapes of the Kohn–Sham molecular orbitals (MOs) involved in electronic transitions were misleading in constructing the MO correlation diagrams. To provide better understanding of redistribution of electron density upon excitation, the natural bond orbital (NBO) analysis was applied. Bearing in mind the spatial and energetic separations, as well as the character of the π bonding, lone pair, and π* antibonding natural localized molecular orbitals (NLMOs), the “NLMO clusters” were constructed. NLMO cluster should be understood as a part of a molecule characterized with distinguished electron density. It was shown that all absorption bands including all electronic transitions need to be inspected to fully understand the UV–vis spectrum of a certain compound, and, thus, to learn more about its UV–vis light absorption. Our investigation showed that the TDDFT and NBO theories are complementary, as the results from the two approaches can be combined to interpret the UV–vis spectra. Agreement between the predictions of the TDDFT approach and those based on the NLMO clusters is excellent in the case of major electronic transitions and long wavelengths. It should be emphasized that the approach for investigation of UV–vis light absorption based on the NLMO clusters is applied for the first time.</description><subject>Absorption spectra</subject><subject>Bonding</subject><subject>Clusters</subject><subject>Electron density</subject><subject>Electronics</subject><subject>Orbitals</subject><subject>Phenols</subject><subject>Spectra</subject><issn>1089-5639</issn><issn>1520-5215</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNqNkc1u1DAURi0EoqWwZ4W8ZEEG_8RxshymFJAqitQp28ixbzSuEtvYTqXueAQk3pAnwdMZ2CGxuvdK5_vu4iD0kpIVJYy-VTqtboNWKzEQQVn3CJ1SwUglGBWPy07arhIN707Qs5RuCSGUs_opOmENk7Vs21P0Yx3CZLXK1jvsR7y1M1TnEMAZcBmfg0s23-OLxek9oiasnMGfVV5i2d_5clzFweZybHfgo4WEs8d5B_jm66_vP-9swush-RgePlwH0Dmq_adrPwP-sgPny3-88XPwizPpOXoyqinBi-M8QzcX77ebj9Xl1YdPm_VlpXjT5WqgnHCQAx1qLjVoQUWjmTYNUFYbKUQtBG91y-Qoa8KEGYVqjWZCdMTwTvMz9PrQG6L_tkDK_WyThmlSDvySeiol4bxuqPwPlHSSCNk1BSUHVEefUoSxD9HOKt73lPR7ZX1R1u-V9UdlJfLq2L4MM5i_gT-OCvDmADxE_RKLhfTvvt9Of6QY</recordid><startdate>20150903</startdate><enddate>20150903</enddate><creator>Markovic, Svetlana</creator><creator>Tosovic, Jelena</creator><general>American Chemical Society</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>L7M</scope></search><sort><creationdate>20150903</creationdate><title>Application of Time-Dependent Density Functional and Natural Bond Orbital Theories to the UV–vis Absorption Spectra of Some Phenolic Compounds</title><author>Markovic, Svetlana ; Tosovic, Jelena</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a369t-b1303e7b1b437cec5156c2cd6e124d75545538c827f74025df5a8dc25590d39c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Absorption spectra</topic><topic>Bonding</topic><topic>Clusters</topic><topic>Electron density</topic><topic>Electronics</topic><topic>Orbitals</topic><topic>Phenols</topic><topic>Spectra</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Markovic, Svetlana</creatorcontrib><creatorcontrib>Tosovic, Jelena</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, &amp; general theory</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Markovic, Svetlana</au><au>Tosovic, Jelena</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Application of Time-Dependent Density Functional and Natural Bond Orbital Theories to the UV–vis Absorption Spectra of Some Phenolic Compounds</atitle><jtitle>The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, &amp; general theory</jtitle><addtitle>J. Phys. Chem. A</addtitle><date>2015-09-03</date><risdate>2015</risdate><volume>119</volume><issue>35</issue><spage>9352</spage><epage>9362</epage><pages>9352-9362</pages><issn>1089-5639</issn><eissn>1520-5215</eissn><abstract>The UV–vis properties of 22 natural phenolic compounds, comprising anthraquinones, neoflavonoids, and flavonoids were systematically examined. The time-dependent density functional theory (TDDFT) approach in combination with the B3LYP, B3LYP-D2, B3P86, and M06-2X functionals was used to simulate the UV–vis spectra of the investigated compounds. It was shown that all methods exhibit very good (B3LYP slightly better) performance in reproducing the examined UV–vis spectra. However, the shapes of the Kohn–Sham molecular orbitals (MOs) involved in electronic transitions were misleading in constructing the MO correlation diagrams. To provide better understanding of redistribution of electron density upon excitation, the natural bond orbital (NBO) analysis was applied. Bearing in mind the spatial and energetic separations, as well as the character of the π bonding, lone pair, and π* antibonding natural localized molecular orbitals (NLMOs), the “NLMO clusters” were constructed. NLMO cluster should be understood as a part of a molecule characterized with distinguished electron density. It was shown that all absorption bands including all electronic transitions need to be inspected to fully understand the UV–vis spectrum of a certain compound, and, thus, to learn more about its UV–vis light absorption. Our investigation showed that the TDDFT and NBO theories are complementary, as the results from the two approaches can be combined to interpret the UV–vis spectra. Agreement between the predictions of the TDDFT approach and those based on the NLMO clusters is excellent in the case of major electronic transitions and long wavelengths. It should be emphasized that the approach for investigation of UV–vis light absorption based on the NLMO clusters is applied for the first time.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>26274788</pmid><doi>10.1021/acs.jpca.5b05129</doi><tpages>11</tpages></addata></record>
fulltext fulltext
identifier ISSN: 1089-5639
ispartof The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory, 2015-09, Vol.119 (35), p.9352-9362
issn 1089-5639
1520-5215
language eng
recordid cdi_proquest_miscellaneous_1770334617
source American Chemical Society:Jisc Collections:American Chemical Society Read & Publish Agreement 2022-2024 (Reading list)
subjects Absorption spectra
Bonding
Clusters
Electron density
Electronics
Orbitals
Phenols
Spectra
title Application of Time-Dependent Density Functional and Natural Bond Orbital Theories to the UV–vis Absorption Spectra of Some Phenolic Compounds
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-16T04%3A59%3A14IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Application%20of%20Time-Dependent%20Density%20Functional%20and%20Natural%20Bond%20Orbital%20Theories%20to%20the%20UV%E2%80%93vis%20Absorption%20Spectra%20of%20Some%20Phenolic%20Compounds&rft.jtitle=The%20journal%20of%20physical%20chemistry.%20A,%20Molecules,%20spectroscopy,%20kinetics,%20environment,%20&%20general%20theory&rft.au=Markovic,%20Svetlana&rft.date=2015-09-03&rft.volume=119&rft.issue=35&rft.spage=9352&rft.epage=9362&rft.pages=9352-9362&rft.issn=1089-5639&rft.eissn=1520-5215&rft_id=info:doi/10.1021/acs.jpca.5b05129&rft_dat=%3Cproquest_cross%3E1770334617%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-a369t-b1303e7b1b437cec5156c2cd6e124d75545538c827f74025df5a8dc25590d39c3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1709705796&rft_id=info:pmid/26274788&rfr_iscdi=true