Loading…
Quantitative modeling of bioconcentration factors of carbonyl herbicides using multivariate image analysis
The bioconcentration factor (BCF) is an important parameter used to estimate the propensity of chemicals to accumulate in aquatic organisms from the ambient environment. While simple regressions for estimating the BCF of chemical compounds from water solubility or the n-octanol/water partition coeff...
Saved in:
Published in: | Chemosphere (Oxford) 2016-06, Vol.152, p.190-195 |
---|---|
Main Authors: | , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c410t-880744a7c674b5f111cd2c216ff44d30825ec806b1951fbc1cccbdf30c3fcf403 |
---|---|
cites | cdi_FETCH-LOGICAL-c410t-880744a7c674b5f111cd2c216ff44d30825ec806b1951fbc1cccbdf30c3fcf403 |
container_end_page | 195 |
container_issue | |
container_start_page | 190 |
container_title | Chemosphere (Oxford) |
container_volume | 152 |
creator | Freitas, Mirlaine R. Barigye, Stephen J. Daré, Joyce K. Freitas, Matheus P. |
description | The bioconcentration factor (BCF) is an important parameter used to estimate the propensity of chemicals to accumulate in aquatic organisms from the ambient environment. While simple regressions for estimating the BCF of chemical compounds from water solubility or the n-octanol/water partition coefficient have been proposed in the literature, these models do not always yield good correlations and more descriptive variables are required for better modeling of BCF data for a given series of organic pollutants, such as some herbicides. Thus, the logBCF values for a set of carbonyl herbicides comprising amide, urea, carbamate and thiocarbamate groups were quantitatively modeled using multivariate image analysis (MIA) descriptors, derived from colored image representations for chemical structures. The logBCF model was calibrated and vigorously validated (r2 = 0.79, q2 = 0.70 and rtest2 = 0.81), providing a comprehensive three-parameter linear equation after variable selection (logBCF = 5.682 − 0.00233 × X9774 − 0.00070 × X813 − 0.00273 × X5144); the variables represent pixel coordinates in the multivariate image. Finally, chemical interpretation of the obtained models in terms of the structural characteristics responsible for the enhanced or reduced logBCF values was performed, providing key leads in the prospective development of more eco-friendly synthetic herbicides.
[Display omitted]
•Image-based descriptors describe the bioconcentration factors of carbonyl herbicides.•A three-parameter linear equation yielded a predictive and validated QSPR model.•Interpretation of built model provided information on structural features affecting BCF. |
doi_str_mv | 10.1016/j.chemosphere.2016.03.011 |
format | article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1785250457</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0045653516303174</els_id><sourcerecordid>1778707580</sourcerecordid><originalsourceid>FETCH-LOGICAL-c410t-880744a7c674b5f111cd2c216ff44d30825ec806b1951fbc1cccbdf30c3fcf403</originalsourceid><addsrcrecordid>eNqNkUFr3DAQhUVpaTZJ_0Jxb73Y1diWJR_L0jaBQCk0ZyGPR4kW29pKcmD_fWU2LTnmJNB87430HmOfgFfAoftyqPCRZh-PjxSoqvNVxZuKA7xhO1CyL6Hu1Vu247wVZScaccEuYzxwnknRv2cXdddLAAk7dvi1miW5ZJJ7omL2I01ueSi8LQbn0S9ISwp56JfCGkw-xG2GJgx-OU1FfsDg0I0UizVuwnmdspMJziQq3GweqDCLmU7RxWv2zpop0ofn84rdf__2e39T3v38cbv_eldiCzyVSnHZtkZiJ9tBWADAscYaOmvbdmy4qgWh4t0AvQA7ICDiMNqGY2PRtry5Yp_Pvsfg_6wUk55dRJoms5BfowapRC1yNPIVqFSSS6E21_6MYvAxBrL6GPL_wkkD11sr-qBftKK3VjRvdG4laz8-r1mHmcb_yn81ZGB_Bijn8uQo6IiOcvijC4RJj969Ys1f8-CmrQ</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1778707580</pqid></control><display><type>article</type><title>Quantitative modeling of bioconcentration factors of carbonyl herbicides using multivariate image analysis</title><source>Elsevier</source><creator>Freitas, Mirlaine R. ; Barigye, Stephen J. ; Daré, Joyce K. ; Freitas, Matheus P.</creator><creatorcontrib>Freitas, Mirlaine R. ; Barigye, Stephen J. ; Daré, Joyce K. ; Freitas, Matheus P.</creatorcontrib><description>The bioconcentration factor (BCF) is an important parameter used to estimate the propensity of chemicals to accumulate in aquatic organisms from the ambient environment. While simple regressions for estimating the BCF of chemical compounds from water solubility or the n-octanol/water partition coefficient have been proposed in the literature, these models do not always yield good correlations and more descriptive variables are required for better modeling of BCF data for a given series of organic pollutants, such as some herbicides. Thus, the logBCF values for a set of carbonyl herbicides comprising amide, urea, carbamate and thiocarbamate groups were quantitatively modeled using multivariate image analysis (MIA) descriptors, derived from colored image representations for chemical structures. The logBCF model was calibrated and vigorously validated (r2 = 0.79, q2 = 0.70 and rtest2 = 0.81), providing a comprehensive three-parameter linear equation after variable selection (logBCF = 5.682 − 0.00233 × X9774 − 0.00070 × X813 − 0.00273 × X5144); the variables represent pixel coordinates in the multivariate image. Finally, chemical interpretation of the obtained models in terms of the structural characteristics responsible for the enhanced or reduced logBCF values was performed, providing key leads in the prospective development of more eco-friendly synthetic herbicides.
[Display omitted]
•Image-based descriptors describe the bioconcentration factors of carbonyl herbicides.•A three-parameter linear equation yielded a predictive and validated QSPR model.•Interpretation of built model provided information on structural features affecting BCF.</description><identifier>ISSN: 0045-6535</identifier><identifier>EISSN: 1879-1298</identifier><identifier>DOI: 10.1016/j.chemosphere.2016.03.011</identifier><identifier>PMID: 26971171</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>1-Octanol - chemistry ; Bioconcentration ; Carbonyl herbicides ; Environmental Monitoring - methods ; Herbicides - analysis ; Herbicides - chemistry ; Image analysis ; Models, Theoretical ; Multivariate Analysis ; Prospective Studies ; QSPR ; Quantitative Structure-Activity Relationship ; Solubility ; Water - chemistry ; Water Pollutants, Chemical - analysis ; Water Pollutants, Chemical - chemistry</subject><ispartof>Chemosphere (Oxford), 2016-06, Vol.152, p.190-195</ispartof><rights>2016 Elsevier Ltd</rights><rights>Copyright © 2016 Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c410t-880744a7c674b5f111cd2c216ff44d30825ec806b1951fbc1cccbdf30c3fcf403</citedby><cites>FETCH-LOGICAL-c410t-880744a7c674b5f111cd2c216ff44d30825ec806b1951fbc1cccbdf30c3fcf403</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26971171$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Freitas, Mirlaine R.</creatorcontrib><creatorcontrib>Barigye, Stephen J.</creatorcontrib><creatorcontrib>Daré, Joyce K.</creatorcontrib><creatorcontrib>Freitas, Matheus P.</creatorcontrib><title>Quantitative modeling of bioconcentration factors of carbonyl herbicides using multivariate image analysis</title><title>Chemosphere (Oxford)</title><addtitle>Chemosphere</addtitle><description>The bioconcentration factor (BCF) is an important parameter used to estimate the propensity of chemicals to accumulate in aquatic organisms from the ambient environment. While simple regressions for estimating the BCF of chemical compounds from water solubility or the n-octanol/water partition coefficient have been proposed in the literature, these models do not always yield good correlations and more descriptive variables are required for better modeling of BCF data for a given series of organic pollutants, such as some herbicides. Thus, the logBCF values for a set of carbonyl herbicides comprising amide, urea, carbamate and thiocarbamate groups were quantitatively modeled using multivariate image analysis (MIA) descriptors, derived from colored image representations for chemical structures. The logBCF model was calibrated and vigorously validated (r2 = 0.79, q2 = 0.70 and rtest2 = 0.81), providing a comprehensive three-parameter linear equation after variable selection (logBCF = 5.682 − 0.00233 × X9774 − 0.00070 × X813 − 0.00273 × X5144); the variables represent pixel coordinates in the multivariate image. Finally, chemical interpretation of the obtained models in terms of the structural characteristics responsible for the enhanced or reduced logBCF values was performed, providing key leads in the prospective development of more eco-friendly synthetic herbicides.
[Display omitted]
•Image-based descriptors describe the bioconcentration factors of carbonyl herbicides.•A three-parameter linear equation yielded a predictive and validated QSPR model.•Interpretation of built model provided information on structural features affecting BCF.</description><subject>1-Octanol - chemistry</subject><subject>Bioconcentration</subject><subject>Carbonyl herbicides</subject><subject>Environmental Monitoring - methods</subject><subject>Herbicides - analysis</subject><subject>Herbicides - chemistry</subject><subject>Image analysis</subject><subject>Models, Theoretical</subject><subject>Multivariate Analysis</subject><subject>Prospective Studies</subject><subject>QSPR</subject><subject>Quantitative Structure-Activity Relationship</subject><subject>Solubility</subject><subject>Water - chemistry</subject><subject>Water Pollutants, Chemical - analysis</subject><subject>Water Pollutants, Chemical - chemistry</subject><issn>0045-6535</issn><issn>1879-1298</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNqNkUFr3DAQhUVpaTZJ_0Jxb73Y1diWJR_L0jaBQCk0ZyGPR4kW29pKcmD_fWU2LTnmJNB87430HmOfgFfAoftyqPCRZh-PjxSoqvNVxZuKA7xhO1CyL6Hu1Vu247wVZScaccEuYzxwnknRv2cXdddLAAk7dvi1miW5ZJJ7omL2I01ueSi8LQbn0S9ISwp56JfCGkw-xG2GJgx-OU1FfsDg0I0UizVuwnmdspMJziQq3GweqDCLmU7RxWv2zpop0ofn84rdf__2e39T3v38cbv_eldiCzyVSnHZtkZiJ9tBWADAscYaOmvbdmy4qgWh4t0AvQA7ICDiMNqGY2PRtry5Yp_Pvsfg_6wUk55dRJoms5BfowapRC1yNPIVqFSSS6E21_6MYvAxBrL6GPL_wkkD11sr-qBftKK3VjRvdG4laz8-r1mHmcb_yn81ZGB_Bijn8uQo6IiOcvijC4RJj969Ys1f8-CmrQ</recordid><startdate>201606</startdate><enddate>201606</enddate><creator>Freitas, Mirlaine R.</creator><creator>Barigye, Stephen J.</creator><creator>Daré, Joyce K.</creator><creator>Freitas, Matheus P.</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7ST</scope><scope>7TV</scope><scope>C1K</scope><scope>SOI</scope></search><sort><creationdate>201606</creationdate><title>Quantitative modeling of bioconcentration factors of carbonyl herbicides using multivariate image analysis</title><author>Freitas, Mirlaine R. ; Barigye, Stephen J. ; Daré, Joyce K. ; Freitas, Matheus P.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c410t-880744a7c674b5f111cd2c216ff44d30825ec806b1951fbc1cccbdf30c3fcf403</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>1-Octanol - chemistry</topic><topic>Bioconcentration</topic><topic>Carbonyl herbicides</topic><topic>Environmental Monitoring - methods</topic><topic>Herbicides - analysis</topic><topic>Herbicides - chemistry</topic><topic>Image analysis</topic><topic>Models, Theoretical</topic><topic>Multivariate Analysis</topic><topic>Prospective Studies</topic><topic>QSPR</topic><topic>Quantitative Structure-Activity Relationship</topic><topic>Solubility</topic><topic>Water - chemistry</topic><topic>Water Pollutants, Chemical - analysis</topic><topic>Water Pollutants, Chemical - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Freitas, Mirlaine R.</creatorcontrib><creatorcontrib>Barigye, Stephen J.</creatorcontrib><creatorcontrib>Daré, Joyce K.</creatorcontrib><creatorcontrib>Freitas, Matheus P.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Environment Abstracts</collection><collection>Pollution Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Environment Abstracts</collection><jtitle>Chemosphere (Oxford)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Freitas, Mirlaine R.</au><au>Barigye, Stephen J.</au><au>Daré, Joyce K.</au><au>Freitas, Matheus P.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Quantitative modeling of bioconcentration factors of carbonyl herbicides using multivariate image analysis</atitle><jtitle>Chemosphere (Oxford)</jtitle><addtitle>Chemosphere</addtitle><date>2016-06</date><risdate>2016</risdate><volume>152</volume><spage>190</spage><epage>195</epage><pages>190-195</pages><issn>0045-6535</issn><eissn>1879-1298</eissn><abstract>The bioconcentration factor (BCF) is an important parameter used to estimate the propensity of chemicals to accumulate in aquatic organisms from the ambient environment. While simple regressions for estimating the BCF of chemical compounds from water solubility or the n-octanol/water partition coefficient have been proposed in the literature, these models do not always yield good correlations and more descriptive variables are required for better modeling of BCF data for a given series of organic pollutants, such as some herbicides. Thus, the logBCF values for a set of carbonyl herbicides comprising amide, urea, carbamate and thiocarbamate groups were quantitatively modeled using multivariate image analysis (MIA) descriptors, derived from colored image representations for chemical structures. The logBCF model was calibrated and vigorously validated (r2 = 0.79, q2 = 0.70 and rtest2 = 0.81), providing a comprehensive three-parameter linear equation after variable selection (logBCF = 5.682 − 0.00233 × X9774 − 0.00070 × X813 − 0.00273 × X5144); the variables represent pixel coordinates in the multivariate image. Finally, chemical interpretation of the obtained models in terms of the structural characteristics responsible for the enhanced or reduced logBCF values was performed, providing key leads in the prospective development of more eco-friendly synthetic herbicides.
[Display omitted]
•Image-based descriptors describe the bioconcentration factors of carbonyl herbicides.•A three-parameter linear equation yielded a predictive and validated QSPR model.•Interpretation of built model provided information on structural features affecting BCF.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>26971171</pmid><doi>10.1016/j.chemosphere.2016.03.011</doi><tpages>6</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0045-6535 |
ispartof | Chemosphere (Oxford), 2016-06, Vol.152, p.190-195 |
issn | 0045-6535 1879-1298 |
language | eng |
recordid | cdi_proquest_miscellaneous_1785250457 |
source | Elsevier |
subjects | 1-Octanol - chemistry Bioconcentration Carbonyl herbicides Environmental Monitoring - methods Herbicides - analysis Herbicides - chemistry Image analysis Models, Theoretical Multivariate Analysis Prospective Studies QSPR Quantitative Structure-Activity Relationship Solubility Water - chemistry Water Pollutants, Chemical - analysis Water Pollutants, Chemical - chemistry |
title | Quantitative modeling of bioconcentration factors of carbonyl herbicides using multivariate image analysis |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-30T23%3A37%3A09IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Quantitative%20modeling%20of%20bioconcentration%20factors%20of%20carbonyl%20herbicides%20using%20multivariate%20image%20analysis&rft.jtitle=Chemosphere%20(Oxford)&rft.au=Freitas,%20Mirlaine%20R.&rft.date=2016-06&rft.volume=152&rft.spage=190&rft.epage=195&rft.pages=190-195&rft.issn=0045-6535&rft.eissn=1879-1298&rft_id=info:doi/10.1016/j.chemosphere.2016.03.011&rft_dat=%3Cproquest_cross%3E1778707580%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c410t-880744a7c674b5f111cd2c216ff44d30825ec806b1951fbc1cccbdf30c3fcf403%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1778707580&rft_id=info:pmid/26971171&rfr_iscdi=true |