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A dated phylogeny of the papilionoid legume genus Canavalia reveals recent diversification by a pantropical liana lineage
[Display omitted] •Among the subgenera of Canavalia only Wenderothia was recovered as monophyletic.•Canavalia arose during the Miocene and diversified mostly during the Pleistocene.•The pantropical distribution of Canavalia resulted from recent transoceanic dispersal.•Our data support a relatively r...
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Published in: | Molecular phylogenetics and evolution 2016-05, Vol.98, p.133-146 |
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•Among the subgenera of Canavalia only Wenderothia was recovered as monophyletic.•Canavalia arose during the Miocene and diversified mostly during the Pleistocene.•The pantropical distribution of Canavalia resulted from recent transoceanic dispersal.•Our data support a relatively recent seaway linking Atlantic and Pacific oceans.
Canavalia is a pantropical legume genus of lianas comprising approximately 60 species distributed in a wide range of habitats. In the last taxonomic revision, the genus was divided into four subgenera: Canavalia (Pantropical), Catodonia (Neotropical, excepting one species also found in the Old World), Maunaloa (Hawaiian), and Wenderothia (Neotropical). In this study, we reconstructed the phylogeny of Canavalia using a broad taxon sampling and analyses of nuclear (ETS and ITS) and plastid markers (trnK/matK). We evaluated the infrageneric classification of the genus and investigated its biogeographical history using molecular dating analyses and ancestral area reconstructions. The phylogenetic analyses resolved subgenus Wenderothia as monophyletic. Subgenus Catodonia needs to be recircumscribed and the relationships between subgenera Canavalia and Maunaloa remain unclear. Canavalia arose during the Miocene with a mean stem age estimate of 13.8Ma and mean crown age estimate of 8.7Ma, and most extant species evolved during the Pleistocene. Several climatic and geological events are chronologically coincident with the divergence of the major clades of Canavalia (glacial/interglacial periods, Andes uplift and the formation of Pebas and post-Pebas systems, closure of the Isthmus of Panama, and change in the direction of ocean currents). Ancestral area reconstructions for the early divergence of the genus are equivocal, although, some evidence suggests Canavalia originated in the wet forests of South America and achieved its current pantropical distribution through recent transoceanic dispersal. The evolution of Canavalia is better explained by a series of several processes than by discrete historical events. |
doi_str_mv | 10.1016/j.ympev.2016.02.001 |
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•Among the subgenera of Canavalia only Wenderothia was recovered as monophyletic.•Canavalia arose during the Miocene and diversified mostly during the Pleistocene.•The pantropical distribution of Canavalia resulted from recent transoceanic dispersal.•Our data support a relatively recent seaway linking Atlantic and Pacific oceans.
Canavalia is a pantropical legume genus of lianas comprising approximately 60 species distributed in a wide range of habitats. In the last taxonomic revision, the genus was divided into four subgenera: Canavalia (Pantropical), Catodonia (Neotropical, excepting one species also found in the Old World), Maunaloa (Hawaiian), and Wenderothia (Neotropical). In this study, we reconstructed the phylogeny of Canavalia using a broad taxon sampling and analyses of nuclear (ETS and ITS) and plastid markers (trnK/matK). We evaluated the infrageneric classification of the genus and investigated its biogeographical history using molecular dating analyses and ancestral area reconstructions. The phylogenetic analyses resolved subgenus Wenderothia as monophyletic. Subgenus Catodonia needs to be recircumscribed and the relationships between subgenera Canavalia and Maunaloa remain unclear. Canavalia arose during the Miocene with a mean stem age estimate of 13.8Ma and mean crown age estimate of 8.7Ma, and most extant species evolved during the Pleistocene. Several climatic and geological events are chronologically coincident with the divergence of the major clades of Canavalia (glacial/interglacial periods, Andes uplift and the formation of Pebas and post-Pebas systems, closure of the Isthmus of Panama, and change in the direction of ocean currents). Ancestral area reconstructions for the early divergence of the genus are equivocal, although, some evidence suggests Canavalia originated in the wet forests of South America and achieved its current pantropical distribution through recent transoceanic dispersal. The evolution of Canavalia is better explained by a series of several processes than by discrete historical events.</description><identifier>ISSN: 1055-7903</identifier><identifier>EISSN: 1095-9513</identifier><identifier>DOI: 10.1016/j.ympev.2016.02.001</identifier><identifier>PMID: 26860339</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Ancestral area reconstruction ; Biogeography ; Canavalia - genetics ; Diocleae ; Ecosystem ; Evolution, Molecular ; Isthmus of Panama ; Leguminosae ; Molecular dating ; Phylogeny ; Plastids - genetics ; South America</subject><ispartof>Molecular phylogenetics and evolution, 2016-05, Vol.98, p.133-146</ispartof><rights>2016 Elsevier Inc.</rights><rights>Copyright © 2016 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c437t-500a2e7960e4df99659615574e5cd40e3be2a3b88be67f24d586abffcc31f03a3</citedby><cites>FETCH-LOGICAL-c437t-500a2e7960e4df99659615574e5cd40e3be2a3b88be67f24d586abffcc31f03a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26860339$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Snak, Cristiane</creatorcontrib><creatorcontrib>Vatanparast, Mohammad</creatorcontrib><creatorcontrib>Silva, Christian</creatorcontrib><creatorcontrib>Lewis, Gwilym Peter</creatorcontrib><creatorcontrib>Lavin, Matt</creatorcontrib><creatorcontrib>Kajita, Tadashi</creatorcontrib><creatorcontrib>Queiroz, Luciano Paganucci de</creatorcontrib><title>A dated phylogeny of the papilionoid legume genus Canavalia reveals recent diversification by a pantropical liana lineage</title><title>Molecular phylogenetics and evolution</title><addtitle>Mol Phylogenet Evol</addtitle><description>[Display omitted]
•Among the subgenera of Canavalia only Wenderothia was recovered as monophyletic.•Canavalia arose during the Miocene and diversified mostly during the Pleistocene.•The pantropical distribution of Canavalia resulted from recent transoceanic dispersal.•Our data support a relatively recent seaway linking Atlantic and Pacific oceans.
Canavalia is a pantropical legume genus of lianas comprising approximately 60 species distributed in a wide range of habitats. In the last taxonomic revision, the genus was divided into four subgenera: Canavalia (Pantropical), Catodonia (Neotropical, excepting one species also found in the Old World), Maunaloa (Hawaiian), and Wenderothia (Neotropical). In this study, we reconstructed the phylogeny of Canavalia using a broad taxon sampling and analyses of nuclear (ETS and ITS) and plastid markers (trnK/matK). We evaluated the infrageneric classification of the genus and investigated its biogeographical history using molecular dating analyses and ancestral area reconstructions. The phylogenetic analyses resolved subgenus Wenderothia as monophyletic. Subgenus Catodonia needs to be recircumscribed and the relationships between subgenera Canavalia and Maunaloa remain unclear. Canavalia arose during the Miocene with a mean stem age estimate of 13.8Ma and mean crown age estimate of 8.7Ma, and most extant species evolved during the Pleistocene. Several climatic and geological events are chronologically coincident with the divergence of the major clades of Canavalia (glacial/interglacial periods, Andes uplift and the formation of Pebas and post-Pebas systems, closure of the Isthmus of Panama, and change in the direction of ocean currents). Ancestral area reconstructions for the early divergence of the genus are equivocal, although, some evidence suggests Canavalia originated in the wet forests of South America and achieved its current pantropical distribution through recent transoceanic dispersal. The evolution of Canavalia is better explained by a series of several processes than by discrete historical events.</description><subject>Ancestral area reconstruction</subject><subject>Biogeography</subject><subject>Canavalia - genetics</subject><subject>Diocleae</subject><subject>Ecosystem</subject><subject>Evolution, Molecular</subject><subject>Isthmus of Panama</subject><subject>Leguminosae</subject><subject>Molecular dating</subject><subject>Phylogeny</subject><subject>Plastids - genetics</subject><subject>South America</subject><issn>1055-7903</issn><issn>1095-9513</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNqFkU-P1SAUxYnROH_0E5gYlm5aoZRSFi4mL6NjMokbXRMKlze8tFChbdJvL883utQNlwu_c29yDkLvKKkpod3HU71PM2x1U5qaNDUh9AW6pkTySnLKXp7vnFdCEnaFbnI-FYByyV-jq6brO8KYvEb7HbZ6AYvnp32MRwg7jg4vT4BnPfvRxxC9xSMc1wlw-V4zPuigNz16jRNsoMdcqoGwYOs3SNk7b_RShHjYsS5jwpLiXN5GXDRBlzOAPsIb9MoVMbx9rrfox-f774eH6vHbl6-Hu8fKtEwsFSdENyBkR6C1TsqOy45yLlrgxrYE2ACNZkPfD9AJ17SW950enDOGUUeYZrfow2XunOLPFfKiJp8NjKMOENesaF9cIqJY8n9UiF7QhvIzyi6oSTHnBE7NyU867YoSdY5HndTveNQ5HkUaVdwvqvfPC9ZhAvtX8yePAny6AFAc2TwklY2HYMD6YvKibPT_XPALzf2jvA</recordid><startdate>201605</startdate><enddate>201605</enddate><creator>Snak, Cristiane</creator><creator>Vatanparast, Mohammad</creator><creator>Silva, Christian</creator><creator>Lewis, Gwilym Peter</creator><creator>Lavin, Matt</creator><creator>Kajita, Tadashi</creator><creator>Queiroz, Luciano Paganucci de</creator><general>Elsevier Inc</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H97</scope><scope>L.G</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>201605</creationdate><title>A dated phylogeny of the papilionoid legume genus Canavalia reveals recent diversification by a pantropical liana lineage</title><author>Snak, Cristiane ; Vatanparast, Mohammad ; Silva, Christian ; Lewis, Gwilym Peter ; Lavin, Matt ; Kajita, Tadashi ; Queiroz, Luciano Paganucci de</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c437t-500a2e7960e4df99659615574e5cd40e3be2a3b88be67f24d586abffcc31f03a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Ancestral area reconstruction</topic><topic>Biogeography</topic><topic>Canavalia - genetics</topic><topic>Diocleae</topic><topic>Ecosystem</topic><topic>Evolution, Molecular</topic><topic>Isthmus of Panama</topic><topic>Leguminosae</topic><topic>Molecular dating</topic><topic>Phylogeny</topic><topic>Plastids - genetics</topic><topic>South America</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Snak, Cristiane</creatorcontrib><creatorcontrib>Vatanparast, Mohammad</creatorcontrib><creatorcontrib>Silva, Christian</creatorcontrib><creatorcontrib>Lewis, Gwilym Peter</creatorcontrib><creatorcontrib>Lavin, Matt</creatorcontrib><creatorcontrib>Kajita, Tadashi</creatorcontrib><creatorcontrib>Queiroz, Luciano Paganucci de</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 3: Aquatic Pollution & Environmental Quality</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Molecular phylogenetics and evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Snak, Cristiane</au><au>Vatanparast, Mohammad</au><au>Silva, Christian</au><au>Lewis, Gwilym Peter</au><au>Lavin, Matt</au><au>Kajita, Tadashi</au><au>Queiroz, Luciano Paganucci de</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A dated phylogeny of the papilionoid legume genus Canavalia reveals recent diversification by a pantropical liana lineage</atitle><jtitle>Molecular phylogenetics and evolution</jtitle><addtitle>Mol Phylogenet Evol</addtitle><date>2016-05</date><risdate>2016</risdate><volume>98</volume><spage>133</spage><epage>146</epage><pages>133-146</pages><issn>1055-7903</issn><eissn>1095-9513</eissn><abstract>[Display omitted]
•Among the subgenera of Canavalia only Wenderothia was recovered as monophyletic.•Canavalia arose during the Miocene and diversified mostly during the Pleistocene.•The pantropical distribution of Canavalia resulted from recent transoceanic dispersal.•Our data support a relatively recent seaway linking Atlantic and Pacific oceans.
Canavalia is a pantropical legume genus of lianas comprising approximately 60 species distributed in a wide range of habitats. In the last taxonomic revision, the genus was divided into four subgenera: Canavalia (Pantropical), Catodonia (Neotropical, excepting one species also found in the Old World), Maunaloa (Hawaiian), and Wenderothia (Neotropical). In this study, we reconstructed the phylogeny of Canavalia using a broad taxon sampling and analyses of nuclear (ETS and ITS) and plastid markers (trnK/matK). We evaluated the infrageneric classification of the genus and investigated its biogeographical history using molecular dating analyses and ancestral area reconstructions. The phylogenetic analyses resolved subgenus Wenderothia as monophyletic. Subgenus Catodonia needs to be recircumscribed and the relationships between subgenera Canavalia and Maunaloa remain unclear. Canavalia arose during the Miocene with a mean stem age estimate of 13.8Ma and mean crown age estimate of 8.7Ma, and most extant species evolved during the Pleistocene. Several climatic and geological events are chronologically coincident with the divergence of the major clades of Canavalia (glacial/interglacial periods, Andes uplift and the formation of Pebas and post-Pebas systems, closure of the Isthmus of Panama, and change in the direction of ocean currents). Ancestral area reconstructions for the early divergence of the genus are equivocal, although, some evidence suggests Canavalia originated in the wet forests of South America and achieved its current pantropical distribution through recent transoceanic dispersal. The evolution of Canavalia is better explained by a series of several processes than by discrete historical events.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>26860339</pmid><doi>10.1016/j.ympev.2016.02.001</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Ancestral area reconstruction Biogeography Canavalia - genetics Diocleae Ecosystem Evolution, Molecular Isthmus of Panama Leguminosae Molecular dating Phylogeny Plastids - genetics South America |
title | A dated phylogeny of the papilionoid legume genus Canavalia reveals recent diversification by a pantropical liana lineage |
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