Loading…

Mutation analysis of genes within the dynactin complex in a cohort of hereditary peripheral neuropathies

The cytoplasmic dynein–dynactin genes are attractive candidates for neurodegenerative disorders given their functional role in retrograde transport along neurons. The cytoplasmic dynein heavy chain (DYNC1H1) gene has been implicated in various neurodegenerative disorders, and dynactin 1 (DCTN1) gene...

Full description

Saved in:
Bibliographic Details
Published in:Clinical genetics 2016-08, Vol.90 (2), p.127-133
Main Authors: Tey, S., Ahmad-Annuar, A., Drew, A.P., Shahrizaila, N., Nicholson, G.A., Kennerson, M.L.
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c4942-9cd1c6bed63bd021b6883e630e1865767b3f855aa8409b26c21849e71a84cc0f3
cites cdi_FETCH-LOGICAL-c4942-9cd1c6bed63bd021b6883e630e1865767b3f855aa8409b26c21849e71a84cc0f3
container_end_page 133
container_issue 2
container_start_page 127
container_title Clinical genetics
container_volume 90
creator Tey, S.
Ahmad-Annuar, A.
Drew, A.P.
Shahrizaila, N.
Nicholson, G.A.
Kennerson, M.L.
description The cytoplasmic dynein–dynactin genes are attractive candidates for neurodegenerative disorders given their functional role in retrograde transport along neurons. The cytoplasmic dynein heavy chain (DYNC1H1) gene has been implicated in various neurodegenerative disorders, and dynactin 1 (DCTN1) genes have been implicated in a wide spectrum of disorders including motor neuron disease, Parkinson's disease, spinobulbar muscular atrophy and hereditary spastic paraplegia. However, the involvement of other dynactin genes with inherited peripheral neuropathies (IPN) namely, hereditary sensory neuropathy, hereditary motor neuropathy and Charcot–Marie–Tooth disease is under reported. We screened eight genes; DCTN1‐6 and ACTR1A and ACTR1B in 136 IPN patients using whole‐exome sequencing and high‐resolution melt (HRM) analysis. Eight non‐synonymous variants (including one novel variant) and three synonymous variants were identified. Four variants have been reported previously in other studies, however segregation analysis within family members excluded them from causing IPN in these families. No variants of disease significance were identified in this study suggesting the dynactin genes are unlikely to be a common cause of IPNs. However, with the ease of querying gene variants from exome data, these genes remain worthwhile candidates to assess unsolved IPN families for variants that may affect the function of the proteins.
doi_str_mv 10.1111/cge.12712
format article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1808651793</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>4115062781</sourcerecordid><originalsourceid>FETCH-LOGICAL-c4942-9cd1c6bed63bd021b6883e630e1865767b3f855aa8409b26c21849e71a84cc0f3</originalsourceid><addsrcrecordid>eNqNkc1O3DAUha2qVZlCF32BylI37SLgvzjxsh3RoRK0LAYhsbEc54aYZuLUdgTz9hgGWFSqVG-uz9V3zuIehD5QckjzO7LXcEhZRdkrtKBcqYIQIl6jRR6qUFTyPfQuxpsseVWqt2iPSSmZKMUC9WdzMsn5EZvRDNvoIvYdvoYRIr51qXcjTj3gdjsam7KwfjMNcIfz12TR-5AeDD0EaF0yYYsnCG7K2gx4hDn4yeQUiAfoTWeGCO-f5j66-H68Xp4Up79WP5ZfTwsrlGCFsi21soFW8qYljDayrjlIToDWsqxk1fCuLktjakFUw6RltBYKKpoX1pKO76PPu9wp-D8zxKQ3LloYBjOCn6OmNclBtFL8f1BBVS0Zzeinv9AbP4d8sUeKcyZqKTL1ZUfZ4GMM0OkpuE0-iqZEPzSlc1P6sanMfnxKnJsNtC_kczUZONoBt26A7b-T9HJ1_BxZ7BwuJrh7cZjwW8sqN68vf6705dX67JtcE33O7wG9aKuN</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1803324864</pqid></control><display><type>article</type><title>Mutation analysis of genes within the dynactin complex in a cohort of hereditary peripheral neuropathies</title><source>Wiley-Blackwell Read &amp; Publish Collection</source><creator>Tey, S. ; Ahmad-Annuar, A. ; Drew, A.P. ; Shahrizaila, N. ; Nicholson, G.A. ; Kennerson, M.L.</creator><creatorcontrib>Tey, S. ; Ahmad-Annuar, A. ; Drew, A.P. ; Shahrizaila, N. ; Nicholson, G.A. ; Kennerson, M.L.</creatorcontrib><description>The cytoplasmic dynein–dynactin genes are attractive candidates for neurodegenerative disorders given their functional role in retrograde transport along neurons. The cytoplasmic dynein heavy chain (DYNC1H1) gene has been implicated in various neurodegenerative disorders, and dynactin 1 (DCTN1) genes have been implicated in a wide spectrum of disorders including motor neuron disease, Parkinson's disease, spinobulbar muscular atrophy and hereditary spastic paraplegia. However, the involvement of other dynactin genes with inherited peripheral neuropathies (IPN) namely, hereditary sensory neuropathy, hereditary motor neuropathy and Charcot–Marie–Tooth disease is under reported. We screened eight genes; DCTN1‐6 and ACTR1A and ACTR1B in 136 IPN patients using whole‐exome sequencing and high‐resolution melt (HRM) analysis. Eight non‐synonymous variants (including one novel variant) and three synonymous variants were identified. Four variants have been reported previously in other studies, however segregation analysis within family members excluded them from causing IPN in these families. No variants of disease significance were identified in this study suggesting the dynactin genes are unlikely to be a common cause of IPNs. However, with the ease of querying gene variants from exome data, these genes remain worthwhile candidates to assess unsolved IPN families for variants that may affect the function of the proteins.</description><identifier>ISSN: 0009-9163</identifier><identifier>EISSN: 1399-0004</identifier><identifier>DOI: 10.1111/cge.12712</identifier><identifier>PMID: 26662454</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Activin Receptors, Type I - genetics ; Charcot-Marie-Tooth ; Cohort Studies ; DNA Mutational Analysis ; dynactin ; Dynactin Complex - genetics ; Exome ; Gene Expression ; Genes ; Genetic disorders ; hereditary motor neuropathies ; hereditary sensory neuropathies ; High-Throughput Nucleotide Sequencing ; Humans ; Mutation ; Neurological disorders ; Nucleic Acid Denaturation ; Pedigree ; Peripheral Nervous System Diseases - genetics ; Peripheral Nervous System Diseases - pathology ; peripheral neuropathies ; Protein Isoforms - genetics ; Protein Subunits - genetics ; Proteins</subject><ispartof>Clinical genetics, 2016-08, Vol.90 (2), p.127-133</ispartof><rights>2015 John Wiley &amp; Sons A/S. Published by John Wiley &amp; Sons Ltd</rights><rights>2015 John Wiley &amp; Sons A/S. Published by John Wiley &amp; Sons Ltd.</rights><rights>2016 John Wiley &amp; Sons A/S. Published by John Wiley &amp; Sons Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4942-9cd1c6bed63bd021b6883e630e1865767b3f855aa8409b26c21849e71a84cc0f3</citedby><cites>FETCH-LOGICAL-c4942-9cd1c6bed63bd021b6883e630e1865767b3f855aa8409b26c21849e71a84cc0f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26662454$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Tey, S.</creatorcontrib><creatorcontrib>Ahmad-Annuar, A.</creatorcontrib><creatorcontrib>Drew, A.P.</creatorcontrib><creatorcontrib>Shahrizaila, N.</creatorcontrib><creatorcontrib>Nicholson, G.A.</creatorcontrib><creatorcontrib>Kennerson, M.L.</creatorcontrib><title>Mutation analysis of genes within the dynactin complex in a cohort of hereditary peripheral neuropathies</title><title>Clinical genetics</title><addtitle>Clin Genet</addtitle><description>The cytoplasmic dynein–dynactin genes are attractive candidates for neurodegenerative disorders given their functional role in retrograde transport along neurons. The cytoplasmic dynein heavy chain (DYNC1H1) gene has been implicated in various neurodegenerative disorders, and dynactin 1 (DCTN1) genes have been implicated in a wide spectrum of disorders including motor neuron disease, Parkinson's disease, spinobulbar muscular atrophy and hereditary spastic paraplegia. However, the involvement of other dynactin genes with inherited peripheral neuropathies (IPN) namely, hereditary sensory neuropathy, hereditary motor neuropathy and Charcot–Marie–Tooth disease is under reported. We screened eight genes; DCTN1‐6 and ACTR1A and ACTR1B in 136 IPN patients using whole‐exome sequencing and high‐resolution melt (HRM) analysis. Eight non‐synonymous variants (including one novel variant) and three synonymous variants were identified. Four variants have been reported previously in other studies, however segregation analysis within family members excluded them from causing IPN in these families. No variants of disease significance were identified in this study suggesting the dynactin genes are unlikely to be a common cause of IPNs. However, with the ease of querying gene variants from exome data, these genes remain worthwhile candidates to assess unsolved IPN families for variants that may affect the function of the proteins.</description><subject>Activin Receptors, Type I - genetics</subject><subject>Charcot-Marie-Tooth</subject><subject>Cohort Studies</subject><subject>DNA Mutational Analysis</subject><subject>dynactin</subject><subject>Dynactin Complex - genetics</subject><subject>Exome</subject><subject>Gene Expression</subject><subject>Genes</subject><subject>Genetic disorders</subject><subject>hereditary motor neuropathies</subject><subject>hereditary sensory neuropathies</subject><subject>High-Throughput Nucleotide Sequencing</subject><subject>Humans</subject><subject>Mutation</subject><subject>Neurological disorders</subject><subject>Nucleic Acid Denaturation</subject><subject>Pedigree</subject><subject>Peripheral Nervous System Diseases - genetics</subject><subject>Peripheral Nervous System Diseases - pathology</subject><subject>peripheral neuropathies</subject><subject>Protein Isoforms - genetics</subject><subject>Protein Subunits - genetics</subject><subject>Proteins</subject><issn>0009-9163</issn><issn>1399-0004</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNqNkc1O3DAUha2qVZlCF32BylI37SLgvzjxsh3RoRK0LAYhsbEc54aYZuLUdgTz9hgGWFSqVG-uz9V3zuIehD5QckjzO7LXcEhZRdkrtKBcqYIQIl6jRR6qUFTyPfQuxpsseVWqt2iPSSmZKMUC9WdzMsn5EZvRDNvoIvYdvoYRIr51qXcjTj3gdjsam7KwfjMNcIfz12TR-5AeDD0EaF0yYYsnCG7K2gx4hDn4yeQUiAfoTWeGCO-f5j66-H68Xp4Up79WP5ZfTwsrlGCFsi21soFW8qYljDayrjlIToDWsqxk1fCuLktjakFUw6RltBYKKpoX1pKO76PPu9wp-D8zxKQ3LloYBjOCn6OmNclBtFL8f1BBVS0Zzeinv9AbP4d8sUeKcyZqKTL1ZUfZ4GMM0OkpuE0-iqZEPzSlc1P6sanMfnxKnJsNtC_kczUZONoBt26A7b-T9HJ1_BxZ7BwuJrh7cZjwW8sqN68vf6705dX67JtcE33O7wG9aKuN</recordid><startdate>201608</startdate><enddate>201608</enddate><creator>Tey, S.</creator><creator>Ahmad-Annuar, A.</creator><creator>Drew, A.P.</creator><creator>Shahrizaila, N.</creator><creator>Nicholson, G.A.</creator><creator>Kennerson, M.L.</creator><general>Blackwell Publishing Ltd</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TK</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>201608</creationdate><title>Mutation analysis of genes within the dynactin complex in a cohort of hereditary peripheral neuropathies</title><author>Tey, S. ; Ahmad-Annuar, A. ; Drew, A.P. ; Shahrizaila, N. ; Nicholson, G.A. ; Kennerson, M.L.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4942-9cd1c6bed63bd021b6883e630e1865767b3f855aa8409b26c21849e71a84cc0f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Activin Receptors, Type I - genetics</topic><topic>Charcot-Marie-Tooth</topic><topic>Cohort Studies</topic><topic>DNA Mutational Analysis</topic><topic>dynactin</topic><topic>Dynactin Complex - genetics</topic><topic>Exome</topic><topic>Gene Expression</topic><topic>Genes</topic><topic>Genetic disorders</topic><topic>hereditary motor neuropathies</topic><topic>hereditary sensory neuropathies</topic><topic>High-Throughput Nucleotide Sequencing</topic><topic>Humans</topic><topic>Mutation</topic><topic>Neurological disorders</topic><topic>Nucleic Acid Denaturation</topic><topic>Pedigree</topic><topic>Peripheral Nervous System Diseases - genetics</topic><topic>Peripheral Nervous System Diseases - pathology</topic><topic>peripheral neuropathies</topic><topic>Protein Isoforms - genetics</topic><topic>Protein Subunits - genetics</topic><topic>Proteins</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tey, S.</creatorcontrib><creatorcontrib>Ahmad-Annuar, A.</creatorcontrib><creatorcontrib>Drew, A.P.</creatorcontrib><creatorcontrib>Shahrizaila, N.</creatorcontrib><creatorcontrib>Nicholson, G.A.</creatorcontrib><creatorcontrib>Kennerson, M.L.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Neurosciences Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Clinical genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tey, S.</au><au>Ahmad-Annuar, A.</au><au>Drew, A.P.</au><au>Shahrizaila, N.</au><au>Nicholson, G.A.</au><au>Kennerson, M.L.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Mutation analysis of genes within the dynactin complex in a cohort of hereditary peripheral neuropathies</atitle><jtitle>Clinical genetics</jtitle><addtitle>Clin Genet</addtitle><date>2016-08</date><risdate>2016</risdate><volume>90</volume><issue>2</issue><spage>127</spage><epage>133</epage><pages>127-133</pages><issn>0009-9163</issn><eissn>1399-0004</eissn><abstract>The cytoplasmic dynein–dynactin genes are attractive candidates for neurodegenerative disorders given their functional role in retrograde transport along neurons. The cytoplasmic dynein heavy chain (DYNC1H1) gene has been implicated in various neurodegenerative disorders, and dynactin 1 (DCTN1) genes have been implicated in a wide spectrum of disorders including motor neuron disease, Parkinson's disease, spinobulbar muscular atrophy and hereditary spastic paraplegia. However, the involvement of other dynactin genes with inherited peripheral neuropathies (IPN) namely, hereditary sensory neuropathy, hereditary motor neuropathy and Charcot–Marie–Tooth disease is under reported. We screened eight genes; DCTN1‐6 and ACTR1A and ACTR1B in 136 IPN patients using whole‐exome sequencing and high‐resolution melt (HRM) analysis. Eight non‐synonymous variants (including one novel variant) and three synonymous variants were identified. Four variants have been reported previously in other studies, however segregation analysis within family members excluded them from causing IPN in these families. No variants of disease significance were identified in this study suggesting the dynactin genes are unlikely to be a common cause of IPNs. However, with the ease of querying gene variants from exome data, these genes remain worthwhile candidates to assess unsolved IPN families for variants that may affect the function of the proteins.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>26662454</pmid><doi>10.1111/cge.12712</doi><tpages>7</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0009-9163
ispartof Clinical genetics, 2016-08, Vol.90 (2), p.127-133
issn 0009-9163
1399-0004
language eng
recordid cdi_proquest_miscellaneous_1808651793
source Wiley-Blackwell Read & Publish Collection
subjects Activin Receptors, Type I - genetics
Charcot-Marie-Tooth
Cohort Studies
DNA Mutational Analysis
dynactin
Dynactin Complex - genetics
Exome
Gene Expression
Genes
Genetic disorders
hereditary motor neuropathies
hereditary sensory neuropathies
High-Throughput Nucleotide Sequencing
Humans
Mutation
Neurological disorders
Nucleic Acid Denaturation
Pedigree
Peripheral Nervous System Diseases - genetics
Peripheral Nervous System Diseases - pathology
peripheral neuropathies
Protein Isoforms - genetics
Protein Subunits - genetics
Proteins
title Mutation analysis of genes within the dynactin complex in a cohort of hereditary peripheral neuropathies
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-23T01%3A09%3A45IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Mutation%20analysis%20of%20genes%20within%20the%20dynactin%20complex%20in%20a%20cohort%20of%20hereditary%20peripheral%20neuropathies&rft.jtitle=Clinical%20genetics&rft.au=Tey,%20S.&rft.date=2016-08&rft.volume=90&rft.issue=2&rft.spage=127&rft.epage=133&rft.pages=127-133&rft.issn=0009-9163&rft.eissn=1399-0004&rft_id=info:doi/10.1111/cge.12712&rft_dat=%3Cproquest_cross%3E4115062781%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c4942-9cd1c6bed63bd021b6883e630e1865767b3f855aa8409b26c21849e71a84cc0f3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1803324864&rft_id=info:pmid/26662454&rfr_iscdi=true