The complete genomic sequence of a tentative new polerovirus identified in barley in South Korea

The complete nucleotide sequence of a new barley polerovirus, tentatively named barley virus G (BVG), which was isolated in Gimje, South Korea, has been determined using an RNA sequencing technique combined with polymerase chain reaction methods. The viral genomic RNA of BVG is 5,620 nucleotides lon...

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Bibliographic Details
Published in:Archives of virology 2016-07, Vol.161 (7), p.2047-2050
Main Authors: Zhao, Fumei, Lim, Seungmo, Yoo, Ran Hee, Igori, Davaajargal, Kim, Sang-Min, Kwak, Do Yeon, Kim, Sun Lim, Lee, Bong Choon, Moon, Jae Sun
Format: Article
Language:English
Subjects:
Annotated Sequence Record
Barley
Base Sequence
Biomedical and Life Sciences
Biomedicine
Corn
Crop diseases
Genome, Viral
Genomes
Hordeum - virology
Hordeum vulgare
Infectious Diseases
Luteoviridae - classification
Luteoviridae - genetics
Luteoviridae - isolation & purification
Medical Microbiology
Molecular Sequence Data
Open Reading Frames
Phylogeny
Plant Diseases - virology
Proteins
Republic of Korea
Virology
Viruses
Zea mays
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Summary:The complete nucleotide sequence of a new barley polerovirus, tentatively named barley virus G (BVG), which was isolated in Gimje, South Korea, has been determined using an RNA sequencing technique combined with polymerase chain reaction methods. The viral genomic RNA of BVG is 5,620 nucleotides long and contains six typical open reading frames commonly observed in other poleroviruses. Sequence comparisons revealed that BVG is most closely related to maize yellow dwarf virus-RMV, with the highest amino acid identities being less than 90 % for all of the corresponding proteins. These results suggested that BVG is a member of a new species in the genus Polerovirus .
ISSN:0304-8608
1432-8798
DOI:10.1007/s00705-016-2881-0