Loading…
Development of a real-time quantitative RT-PCR to detect REV contamination in live vaccine
Based on the published Avian reticuloendotheliosis virus (REV) whole genome sequence, primers and TaqMan probes were designed and synthesized, and the TaqMan probe fluorescence real-time quantitative RT-PCR (qRT-PCR) method for detecting the REV pol gene was established by optimizing the reaction co...
Saved in:
Published in: | Poultry science 2016-09, Vol.95 (9), p.2023-2029 |
---|---|
Main Authors: | , , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c349t-1f993c7269f9528df3bdf51e70ef08a7041429fac9f6a5e7f8f1044d52157ffd3 |
---|---|
cites | cdi_FETCH-LOGICAL-c349t-1f993c7269f9528df3bdf51e70ef08a7041429fac9f6a5e7f8f1044d52157ffd3 |
container_end_page | 2029 |
container_issue | 9 |
container_start_page | 2023 |
container_title | Poultry science |
container_volume | 95 |
creator | Luan, Huaibiao Wang, Yixin Li, Yang Cui, Zhizhong Chang, Shuang Zhao, Peng |
description | Based on the published Avian reticuloendotheliosis virus (REV) whole genome sequence, primers and TaqMan probes were designed and synthesized, and the TaqMan probe fluorescence real-time quantitative RT-PCR (qRT-PCR) method for detecting the REV pol gene was established by optimizing the reaction conditions. Sensitivity analysis showed that the qRT-PCR method had a sensitivity that was 1,000-fold higher than conventional PCR. Additionally, no amplification signals were obtained when we attempted to detect DNA or cDNA of ALV-A/B/J, MDV, CIAV, IBDV, ARV, NDV, AIV, or other viruses, suggesting a high specificity for our method. Various titers of REV were artificially “spiked” into the FPV and MDV vaccines to simulate REV contamination in attenuated vaccines to validate this qRT-PCR method. Our findings indicated that this qRT-PCR method could detect REV contamination at a dose of 1 TCID50/1,000 feathers, which was 10,000-fold more sensitive than the regular RT-PCR detection (104 TCID50/1000 feathers). |
doi_str_mv | 10.3382/ps/pew147 |
format | article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1812223454</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><oup_id>10.3382/ps/pew147</oup_id><sourcerecordid>1812223454</sourcerecordid><originalsourceid>FETCH-LOGICAL-c349t-1f993c7269f9528df3bdf51e70ef08a7041429fac9f6a5e7f8f1044d52157ffd3</originalsourceid><addsrcrecordid>eNp90DtPwzAUhmELgWi5DPwB5IEBhlBf4joeUSkXqRKoKgwskescS0ZJnMZOEf-eVCmMTGd59EnnReiCklvOMzZpwqSBL5rKAzSmgomEU0kP0ZgQzhIhFR2hkxA-CWF0OpXHaMQkZYxn2Rh93MMWSt9UUEfsLda4BV0m0VWAN52uo4s6ui3g5Sp5nS1x9LiACCbi5fwdG19HXbm6J77Grsbljm61Ma6GM3RkdRngfH9P0dvDfDV7ShYvj8-zu0VieKpiQq1S3Eg2VVYJlhWWrwsrKEgClmRakpSmTFltlJ1qAdJmlpI0LQSjQlpb8FN0Pew2rd90EGJeuWCgLHUNvgs5zfpnGU9F2tObgZrWh9CCzZvWVbr9zinJdynzJuRDyt5e7me7dQXFn_xt14OrAfiu-WfnB-NIe4k</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1812223454</pqid></control><display><type>article</type><title>Development of a real-time quantitative RT-PCR to detect REV contamination in live vaccine</title><source>ScienceDirect Journals</source><source>PubMed Central</source><creator>Luan, Huaibiao ; Wang, Yixin ; Li, Yang ; Cui, Zhizhong ; Chang, Shuang ; Zhao, Peng</creator><creatorcontrib>Luan, Huaibiao ; Wang, Yixin ; Li, Yang ; Cui, Zhizhong ; Chang, Shuang ; Zhao, Peng</creatorcontrib><description>Based on the published Avian reticuloendotheliosis virus (REV) whole genome sequence, primers and TaqMan probes were designed and synthesized, and the TaqMan probe fluorescence real-time quantitative RT-PCR (qRT-PCR) method for detecting the REV pol gene was established by optimizing the reaction conditions. Sensitivity analysis showed that the qRT-PCR method had a sensitivity that was 1,000-fold higher than conventional PCR. Additionally, no amplification signals were obtained when we attempted to detect DNA or cDNA of ALV-A/B/J, MDV, CIAV, IBDV, ARV, NDV, AIV, or other viruses, suggesting a high specificity for our method. Various titers of REV were artificially “spiked” into the FPV and MDV vaccines to simulate REV contamination in attenuated vaccines to validate this qRT-PCR method. Our findings indicated that this qRT-PCR method could detect REV contamination at a dose of 1 TCID50/1,000 feathers, which was 10,000-fold more sensitive than the regular RT-PCR detection (104 TCID50/1000 feathers).</description><identifier>ISSN: 0032-5791</identifier><identifier>EISSN: 1525-3171</identifier><identifier>DOI: 10.3382/ps/pew147</identifier><identifier>PMID: 27122388</identifier><language>eng</language><publisher>England: Poultry Science Association, Inc</publisher><subject>Animals ; Gene Products, pol - isolation & purification ; Poultry Diseases - prevention & control ; Poultry Diseases - virology ; Real-Time Polymerase Chain Reaction - veterinary ; Reticuloendotheliosis virus - immunology ; Reticuloendotheliosis virus - isolation & purification ; Retroviridae Infections - prevention & control ; Retroviridae Infections - veterinary ; Retroviridae Infections - virology ; Tumor Virus Infections - prevention & control ; Tumor Virus Infections - veterinary ; Tumor Virus Infections - virology ; Vaccines, Attenuated - analysis ; Viral Vaccines - analysis</subject><ispartof>Poultry science, 2016-09, Vol.95 (9), p.2023-2029</ispartof><rights>2016 Poultry Science Association Inc. 2016</rights><rights>2016 Poultry Science Association Inc.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c349t-1f993c7269f9528df3bdf51e70ef08a7041429fac9f6a5e7f8f1044d52157ffd3</citedby><cites>FETCH-LOGICAL-c349t-1f993c7269f9528df3bdf51e70ef08a7041429fac9f6a5e7f8f1044d52157ffd3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27122388$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Luan, Huaibiao</creatorcontrib><creatorcontrib>Wang, Yixin</creatorcontrib><creatorcontrib>Li, Yang</creatorcontrib><creatorcontrib>Cui, Zhizhong</creatorcontrib><creatorcontrib>Chang, Shuang</creatorcontrib><creatorcontrib>Zhao, Peng</creatorcontrib><title>Development of a real-time quantitative RT-PCR to detect REV contamination in live vaccine</title><title>Poultry science</title><addtitle>Poult Sci</addtitle><description>Based on the published Avian reticuloendotheliosis virus (REV) whole genome sequence, primers and TaqMan probes were designed and synthesized, and the TaqMan probe fluorescence real-time quantitative RT-PCR (qRT-PCR) method for detecting the REV pol gene was established by optimizing the reaction conditions. Sensitivity analysis showed that the qRT-PCR method had a sensitivity that was 1,000-fold higher than conventional PCR. Additionally, no amplification signals were obtained when we attempted to detect DNA or cDNA of ALV-A/B/J, MDV, CIAV, IBDV, ARV, NDV, AIV, or other viruses, suggesting a high specificity for our method. Various titers of REV were artificially “spiked” into the FPV and MDV vaccines to simulate REV contamination in attenuated vaccines to validate this qRT-PCR method. Our findings indicated that this qRT-PCR method could detect REV contamination at a dose of 1 TCID50/1,000 feathers, which was 10,000-fold more sensitive than the regular RT-PCR detection (104 TCID50/1000 feathers).</description><subject>Animals</subject><subject>Gene Products, pol - isolation & purification</subject><subject>Poultry Diseases - prevention & control</subject><subject>Poultry Diseases - virology</subject><subject>Real-Time Polymerase Chain Reaction - veterinary</subject><subject>Reticuloendotheliosis virus - immunology</subject><subject>Reticuloendotheliosis virus - isolation & purification</subject><subject>Retroviridae Infections - prevention & control</subject><subject>Retroviridae Infections - veterinary</subject><subject>Retroviridae Infections - virology</subject><subject>Tumor Virus Infections - prevention & control</subject><subject>Tumor Virus Infections - veterinary</subject><subject>Tumor Virus Infections - virology</subject><subject>Vaccines, Attenuated - analysis</subject><subject>Viral Vaccines - analysis</subject><issn>0032-5791</issn><issn>1525-3171</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNp90DtPwzAUhmELgWi5DPwB5IEBhlBf4joeUSkXqRKoKgwskescS0ZJnMZOEf-eVCmMTGd59EnnReiCklvOMzZpwqSBL5rKAzSmgomEU0kP0ZgQzhIhFR2hkxA-CWF0OpXHaMQkZYxn2Rh93MMWSt9UUEfsLda4BV0m0VWAN52uo4s6ui3g5Sp5nS1x9LiACCbi5fwdG19HXbm6J77Grsbljm61Ma6GM3RkdRngfH9P0dvDfDV7ShYvj8-zu0VieKpiQq1S3Eg2VVYJlhWWrwsrKEgClmRakpSmTFltlJ1qAdJmlpI0LQSjQlpb8FN0Pew2rd90EGJeuWCgLHUNvgs5zfpnGU9F2tObgZrWh9CCzZvWVbr9zinJdynzJuRDyt5e7me7dQXFn_xt14OrAfiu-WfnB-NIe4k</recordid><startdate>20160901</startdate><enddate>20160901</enddate><creator>Luan, Huaibiao</creator><creator>Wang, Yixin</creator><creator>Li, Yang</creator><creator>Cui, Zhizhong</creator><creator>Chang, Shuang</creator><creator>Zhao, Peng</creator><general>Poultry Science Association, Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20160901</creationdate><title>Development of a real-time quantitative RT-PCR to detect REV contamination in live vaccine</title><author>Luan, Huaibiao ; Wang, Yixin ; Li, Yang ; Cui, Zhizhong ; Chang, Shuang ; Zhao, Peng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c349t-1f993c7269f9528df3bdf51e70ef08a7041429fac9f6a5e7f8f1044d52157ffd3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Animals</topic><topic>Gene Products, pol - isolation & purification</topic><topic>Poultry Diseases - prevention & control</topic><topic>Poultry Diseases - virology</topic><topic>Real-Time Polymerase Chain Reaction - veterinary</topic><topic>Reticuloendotheliosis virus - immunology</topic><topic>Reticuloendotheliosis virus - isolation & purification</topic><topic>Retroviridae Infections - prevention & control</topic><topic>Retroviridae Infections - veterinary</topic><topic>Retroviridae Infections - virology</topic><topic>Tumor Virus Infections - prevention & control</topic><topic>Tumor Virus Infections - veterinary</topic><topic>Tumor Virus Infections - virology</topic><topic>Vaccines, Attenuated - analysis</topic><topic>Viral Vaccines - analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Luan, Huaibiao</creatorcontrib><creatorcontrib>Wang, Yixin</creatorcontrib><creatorcontrib>Li, Yang</creatorcontrib><creatorcontrib>Cui, Zhizhong</creatorcontrib><creatorcontrib>Chang, Shuang</creatorcontrib><creatorcontrib>Zhao, Peng</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Poultry science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Luan, Huaibiao</au><au>Wang, Yixin</au><au>Li, Yang</au><au>Cui, Zhizhong</au><au>Chang, Shuang</au><au>Zhao, Peng</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Development of a real-time quantitative RT-PCR to detect REV contamination in live vaccine</atitle><jtitle>Poultry science</jtitle><addtitle>Poult Sci</addtitle><date>2016-09-01</date><risdate>2016</risdate><volume>95</volume><issue>9</issue><spage>2023</spage><epage>2029</epage><pages>2023-2029</pages><issn>0032-5791</issn><eissn>1525-3171</eissn><abstract>Based on the published Avian reticuloendotheliosis virus (REV) whole genome sequence, primers and TaqMan probes were designed and synthesized, and the TaqMan probe fluorescence real-time quantitative RT-PCR (qRT-PCR) method for detecting the REV pol gene was established by optimizing the reaction conditions. Sensitivity analysis showed that the qRT-PCR method had a sensitivity that was 1,000-fold higher than conventional PCR. Additionally, no amplification signals were obtained when we attempted to detect DNA or cDNA of ALV-A/B/J, MDV, CIAV, IBDV, ARV, NDV, AIV, or other viruses, suggesting a high specificity for our method. Various titers of REV were artificially “spiked” into the FPV and MDV vaccines to simulate REV contamination in attenuated vaccines to validate this qRT-PCR method. Our findings indicated that this qRT-PCR method could detect REV contamination at a dose of 1 TCID50/1,000 feathers, which was 10,000-fold more sensitive than the regular RT-PCR detection (104 TCID50/1000 feathers).</abstract><cop>England</cop><pub>Poultry Science Association, Inc</pub><pmid>27122388</pmid><doi>10.3382/ps/pew147</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0032-5791 |
ispartof | Poultry science, 2016-09, Vol.95 (9), p.2023-2029 |
issn | 0032-5791 1525-3171 |
language | eng |
recordid | cdi_proquest_miscellaneous_1812223454 |
source | ScienceDirect Journals; PubMed Central |
subjects | Animals Gene Products, pol - isolation & purification Poultry Diseases - prevention & control Poultry Diseases - virology Real-Time Polymerase Chain Reaction - veterinary Reticuloendotheliosis virus - immunology Reticuloendotheliosis virus - isolation & purification Retroviridae Infections - prevention & control Retroviridae Infections - veterinary Retroviridae Infections - virology Tumor Virus Infections - prevention & control Tumor Virus Infections - veterinary Tumor Virus Infections - virology Vaccines, Attenuated - analysis Viral Vaccines - analysis |
title | Development of a real-time quantitative RT-PCR to detect REV contamination in live vaccine |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-07T22%3A10%3A36IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Development%20of%20a%20real-time%20quantitative%20RT-PCR%20to%20detect%20REV%20contamination%20in%20live%20vaccine&rft.jtitle=Poultry%20science&rft.au=Luan,%20Huaibiao&rft.date=2016-09-01&rft.volume=95&rft.issue=9&rft.spage=2023&rft.epage=2029&rft.pages=2023-2029&rft.issn=0032-5791&rft.eissn=1525-3171&rft_id=info:doi/10.3382/ps/pew147&rft_dat=%3Cproquest_cross%3E1812223454%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c349t-1f993c7269f9528df3bdf51e70ef08a7041429fac9f6a5e7f8f1044d52157ffd3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1812223454&rft_id=info:pmid/27122388&rft_oup_id=10.3382/ps/pew147&rfr_iscdi=true |