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Interactions between pyrazole derived enantiomers and Chiralcel OJ: Prediction of enantiomer absolute configurations and elution order by molecular dynamics simulations
[Display omitted] •The interactions between chiral pyrazole derivative and CSP studied using MD simulations.•The solvent and temperature effect was systematically studied.•The (R)- isomer of pyrazole derivative was eluted first followed by the (S)- isomer in polar solvents.•The elution order of a pa...
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Published in: | Journal of molecular graphics & modelling 2016-05, Vol.66, p.123-132 |
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container_title | Journal of molecular graphics & modelling |
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creator | Hu, Guixiang Huang, Meilan Luo, Chengcai Wang, Qi Zou, Jian-Wei |
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•The interactions between chiral pyrazole derivative and CSP studied using MD simulations.•The solvent and temperature effect was systematically studied.•The (R)- isomer of pyrazole derivative was eluted first followed by the (S)- isomer in polar solvents.•The elution order of a pair of enantiomers of the pyrazole derivative was inversed in non-polar n-hexane or vacuum.
The separation of enantiomers and confirmation of their absolute configurations is significant in the development of chiral drugs. The interactions between the enantiomers of chiral pyrazole derivative and polysaccharide-based chiral stationary phase cellulose tris(4-methylbenzoate) (Chiralcel OJ) in seven solvents and under different temperature were studied using molecular dynamics simulations. The results show that solvent effect has remarkable influence on the interactions. Structure analysis discloses that the different interactions between two isomers and chiral stationary phase are dependent on the nature of solvents, which may invert the elution order. The computational method in the present study can be used to predict the elution order and the absolute configurations of enantiomers in HPLC separations and therefore would be valuable in development of chiral drugs. |
doi_str_mv | 10.1016/j.jmgm.2016.04.002 |
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•The interactions between chiral pyrazole derivative and CSP studied using MD simulations.•The solvent and temperature effect was systematically studied.•The (R)- isomer of pyrazole derivative was eluted first followed by the (S)- isomer in polar solvents.•The elution order of a pair of enantiomers of the pyrazole derivative was inversed in non-polar n-hexane or vacuum.
The separation of enantiomers and confirmation of their absolute configurations is significant in the development of chiral drugs. The interactions between the enantiomers of chiral pyrazole derivative and polysaccharide-based chiral stationary phase cellulose tris(4-methylbenzoate) (Chiralcel OJ) in seven solvents and under different temperature were studied using molecular dynamics simulations. The results show that solvent effect has remarkable influence on the interactions. Structure analysis discloses that the different interactions between two isomers and chiral stationary phase are dependent on the nature of solvents, which may invert the elution order. The computational method in the present study can be used to predict the elution order and the absolute configurations of enantiomers in HPLC separations and therefore would be valuable in development of chiral drugs.</description><identifier>ISSN: 1093-3263</identifier><identifier>EISSN: 1873-4243</identifier><identifier>DOI: 10.1016/j.jmgm.2016.04.002</identifier><identifier>PMID: 27060893</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Benzoates - chemistry ; Cellulose - analogs & derivatives ; Cellulose - chemistry ; Chromatography, High Pressure Liquid ; Computational Biology ; Computer simulation ; Drugs ; Elution ; Elution order ; Enantiomer ; Enantiomers ; Interaction ; Molecular dynamics ; Molecular dynamics (MD) ; Molecular Dynamics Simulation ; Molecular Structure ; Pyrazole ; Pyrazoles - chemistry ; Separation ; Solvent effect ; Solvents ; Stereoisomerism</subject><ispartof>Journal of molecular graphics & modelling, 2016-05, Vol.66, p.123-132</ispartof><rights>2016 Elsevier Inc.</rights><rights>Copyright © 2016 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c466t-f74ca8f2f60aee6f22f6093eb8d97865e5f8f55db7419fa18e208fa39b609af93</citedby><cites>FETCH-LOGICAL-c466t-f74ca8f2f60aee6f22f6093eb8d97865e5f8f55db7419fa18e208fa39b609af93</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27060893$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hu, Guixiang</creatorcontrib><creatorcontrib>Huang, Meilan</creatorcontrib><creatorcontrib>Luo, Chengcai</creatorcontrib><creatorcontrib>Wang, Qi</creatorcontrib><creatorcontrib>Zou, Jian-Wei</creatorcontrib><title>Interactions between pyrazole derived enantiomers and Chiralcel OJ: Prediction of enantiomer absolute configurations and elution order by molecular dynamics simulations</title><title>Journal of molecular graphics & modelling</title><addtitle>J Mol Graph Model</addtitle><description>[Display omitted]
•The interactions between chiral pyrazole derivative and CSP studied using MD simulations.•The solvent and temperature effect was systematically studied.•The (R)- isomer of pyrazole derivative was eluted first followed by the (S)- isomer in polar solvents.•The elution order of a pair of enantiomers of the pyrazole derivative was inversed in non-polar n-hexane or vacuum.
The separation of enantiomers and confirmation of their absolute configurations is significant in the development of chiral drugs. The interactions between the enantiomers of chiral pyrazole derivative and polysaccharide-based chiral stationary phase cellulose tris(4-methylbenzoate) (Chiralcel OJ) in seven solvents and under different temperature were studied using molecular dynamics simulations. The results show that solvent effect has remarkable influence on the interactions. Structure analysis discloses that the different interactions between two isomers and chiral stationary phase are dependent on the nature of solvents, which may invert the elution order. The computational method in the present study can be used to predict the elution order and the absolute configurations of enantiomers in HPLC separations and therefore would be valuable in development of chiral drugs.</description><subject>Benzoates - chemistry</subject><subject>Cellulose - analogs & derivatives</subject><subject>Cellulose - chemistry</subject><subject>Chromatography, High Pressure Liquid</subject><subject>Computational Biology</subject><subject>Computer simulation</subject><subject>Drugs</subject><subject>Elution</subject><subject>Elution order</subject><subject>Enantiomer</subject><subject>Enantiomers</subject><subject>Interaction</subject><subject>Molecular dynamics</subject><subject>Molecular dynamics (MD)</subject><subject>Molecular Dynamics Simulation</subject><subject>Molecular Structure</subject><subject>Pyrazole</subject><subject>Pyrazoles - chemistry</subject><subject>Separation</subject><subject>Solvent effect</subject><subject>Solvents</subject><subject>Stereoisomerism</subject><issn>1093-3263</issn><issn>1873-4243</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNqNkc1u1DAUhS1ERUvhBVggL9kk-CdxbMQGjSgUVSoLWFuOfV08SpzBToqmT8Rj4swUxKqw8pX9nXN0fRB6QUlNCRWvt_V2vBlrVuaaNDUh7BE6o7LjVcMa_rjMRPGKM8FP0dOct4QQLkn3BJ2yjggiFT9DPy_jDMnYOUwx4x7mHwAR7_bJ3E0DYAcp3ILDEE0syAgpYxMd3nwLyQwWBnz96Q3-nMCFgwWe_F8sNn2ehmUGbKfow82SzDFntYDycFCkEoL7PR5LoF0Gk7DbRzMGm3EOY7k4aJ6hE2-GDM_vz3P09eL9l83H6ur6w-Xm3VVlGyHmyneNNdIzL4gBEJ6tk-LQS6c6KVpovfRt6_quocobKoER6Q1XfcGMV_wcvTr67tL0fYE86zHksuhgIkxL1lTSVilFqPw32imihJQd_Q9USsaaVrYFZUfUpinnBF7vUhhN2mtK9Nq73uq1d732rkmjS-9F9PLef-lHcH8kv4suwNsjAOXvbgMknW2AaEtxCeys3RQe8v8FCVDDTA</recordid><startdate>201605</startdate><enddate>201605</enddate><creator>Hu, Guixiang</creator><creator>Huang, Meilan</creator><creator>Luo, Chengcai</creator><creator>Wang, Qi</creator><creator>Zou, Jian-Wei</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QO</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>7SC</scope><scope>7U5</scope><scope>JQ2</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope></search><sort><creationdate>201605</creationdate><title>Interactions between pyrazole derived enantiomers and Chiralcel OJ: Prediction of enantiomer absolute configurations and elution order by molecular dynamics simulations</title><author>Hu, Guixiang ; Huang, Meilan ; Luo, Chengcai ; Wang, Qi ; Zou, Jian-Wei</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c466t-f74ca8f2f60aee6f22f6093eb8d97865e5f8f55db7419fa18e208fa39b609af93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Benzoates - chemistry</topic><topic>Cellulose - analogs & derivatives</topic><topic>Cellulose - chemistry</topic><topic>Chromatography, High Pressure Liquid</topic><topic>Computational Biology</topic><topic>Computer simulation</topic><topic>Drugs</topic><topic>Elution</topic><topic>Elution order</topic><topic>Enantiomer</topic><topic>Enantiomers</topic><topic>Interaction</topic><topic>Molecular dynamics</topic><topic>Molecular dynamics (MD)</topic><topic>Molecular Dynamics Simulation</topic><topic>Molecular Structure</topic><topic>Pyrazole</topic><topic>Pyrazoles - chemistry</topic><topic>Separation</topic><topic>Solvent effect</topic><topic>Solvents</topic><topic>Stereoisomerism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hu, Guixiang</creatorcontrib><creatorcontrib>Huang, Meilan</creatorcontrib><creatorcontrib>Luo, Chengcai</creatorcontrib><creatorcontrib>Wang, Qi</creatorcontrib><creatorcontrib>Zou, Jian-Wei</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Computer and Information Systems Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>ProQuest Computer Science Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><jtitle>Journal of molecular graphics & modelling</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hu, Guixiang</au><au>Huang, Meilan</au><au>Luo, Chengcai</au><au>Wang, Qi</au><au>Zou, Jian-Wei</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Interactions between pyrazole derived enantiomers and Chiralcel OJ: Prediction of enantiomer absolute configurations and elution order by molecular dynamics simulations</atitle><jtitle>Journal of molecular graphics & modelling</jtitle><addtitle>J Mol Graph Model</addtitle><date>2016-05</date><risdate>2016</risdate><volume>66</volume><spage>123</spage><epage>132</epage><pages>123-132</pages><issn>1093-3263</issn><eissn>1873-4243</eissn><abstract>[Display omitted]
•The interactions between chiral pyrazole derivative and CSP studied using MD simulations.•The solvent and temperature effect was systematically studied.•The (R)- isomer of pyrazole derivative was eluted first followed by the (S)- isomer in polar solvents.•The elution order of a pair of enantiomers of the pyrazole derivative was inversed in non-polar n-hexane or vacuum.
The separation of enantiomers and confirmation of their absolute configurations is significant in the development of chiral drugs. The interactions between the enantiomers of chiral pyrazole derivative and polysaccharide-based chiral stationary phase cellulose tris(4-methylbenzoate) (Chiralcel OJ) in seven solvents and under different temperature were studied using molecular dynamics simulations. The results show that solvent effect has remarkable influence on the interactions. Structure analysis discloses that the different interactions between two isomers and chiral stationary phase are dependent on the nature of solvents, which may invert the elution order. The computational method in the present study can be used to predict the elution order and the absolute configurations of enantiomers in HPLC separations and therefore would be valuable in development of chiral drugs.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>27060893</pmid><doi>10.1016/j.jmgm.2016.04.002</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Benzoates - chemistry Cellulose - analogs & derivatives Cellulose - chemistry Chromatography, High Pressure Liquid Computational Biology Computer simulation Drugs Elution Elution order Enantiomer Enantiomers Interaction Molecular dynamics Molecular dynamics (MD) Molecular Dynamics Simulation Molecular Structure Pyrazole Pyrazoles - chemistry Separation Solvent effect Solvents Stereoisomerism |
title | Interactions between pyrazole derived enantiomers and Chiralcel OJ: Prediction of enantiomer absolute configurations and elution order by molecular dynamics simulations |
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