Complete genome sequence of the fish pathogen Aeromonas veronii TH0426 with potential application in biosynthesis of pullulanase and chitinase

•It is the first reported complete genome sequence of pathogen in A. veronii.•It explores the potential application in biosynthesis of pullulanase and chitinase.•It will be useful to further explore the pathogenic mechanism of A. veronii TH0426.•It has the potential application in developing vaccine...

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Bibliographic Details
Published in:Journal of biotechnology 2016-06, Vol.227, p.81-82
Main Authors: Kang, Yuanhuan, Pan, Xiaoyi, Xu, Yang, Siddiqui, Shahrood A., Wang, Chunfeng, Shan, Xiaofeng, Qian, Aidong
Format: Article
Language:English
Subjects:
Aeromonas veronii
Aeromonas veronii - enzymology
Aeromonas veronii - genetics
Aeromonas veronii TH0426
Animals
Base Sequence
Biosynthesis of pullulanase and chitinase
Catfish
Catfishes - microbiology
Chitinase
Chitinases - biosynthesis
Complete genome sequencing
Fish
Gene sequencing
Genes
Genome, Bacterial
Genomes
Glycoside Hydrolases - biosynthesis
Pathogens
Pelteobagrus fulvidraco
Pelteobagrus fulvidraco pathogen
Pullulanase
Sequence Analysis, DNA
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Summary:•It is the first reported complete genome sequence of pathogen in A. veronii.•It explores the potential application in biosynthesis of pullulanase and chitinase.•It will be useful to further explore the pathogenic mechanism of A. veronii TH0426.•It has the potential application in developing vaccine to decrease economic losses. Aeromonas veronii TH0426 is a pathogen of the farmed yellow catfish Pelteobagrus fulvidraco but shows high-level expression of pullulanase and chitinase. Here, we present its genome sequence, which is the first reported complete genome of fish pathogen in A. veronii to date. Strain TH0426 harbors a single circular 4,923,009bp chromosome with a GC content of 58.25%. There are 4525 genes identified on its genome, including 4244 protein-coding genes, 32 rRNA genes, 120 tRNA genes, a noncoding RNA and 128 pseudo genes. We believe that the genomic information of A. veronii TH0426 would facilitate to reveal its pathogenic mechanism associated with yellow catfish, develop vaccine to decrease economic losses for fish farming, meanwhile explore the potential application in producing pullulanase and chitinase.
ISSN:0168-1656
1873-4863
DOI:10.1016/j.jbiotec.2016.04.009