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An automated Y-maze based on a reduced instruction set computer (RISC) microcontroller for the assessment of continuous spontaneous alternation in rats
Continuous spontaneous alternation behavior (SAB) in a Y-maze is used for evaluating working memory in rodents. Here, the design of an automated Y-maze equipped with three infrared optocouplers per arm, and commanded by a reduced instruction set computer (RISC) microcontroller is described. The soft...
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Published in: | Behavior research methods 2016-12, Vol.48 (4), p.1631-1643 |
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creator | Heredia-López, Francisco J. Álvarez-Cervera, Fernando J. Collí-Alfaro, José G. Bata-García, José L. Arankowsky-Sandoval, Gloria Góngora-Alfaro, José L. |
description | Continuous spontaneous alternation behavior (SAB) in a Y-maze is used for evaluating working memory in rodents. Here, the design of an automated Y-maze equipped with three infrared optocouplers per arm, and commanded by a reduced instruction set computer (RISC) microcontroller is described. The software was devised for recording only true entries and exits to the arms. Experimental settings are programmed via a keyboard with three buttons and a display. The sequence of arm entries and the time spent in each arm and the neutral zone (NZ) are saved as a text file in a non-volatile memory for later transfer to a USB flash memory. Data files are analyzed with a program developed under LabVIEW® environment, and the results are exported to an Excel® spreadsheet file. Variables measured are: latency to exit the starting arm, sequence and number of arm entries, number of alternations, alternation percentage, and cumulative times spent in each arm and NZ. The automated Y-maze accurately detected the SAB decrease produced in rats by the muscarinic antagonist trihexyphenidyl, and its reversal by caffeine, having 100 % concordance with the alternation percentages calculated by two trained observers who independently watched videos of the same experiments. Although the values of time spent in the arms and NZ measured by the automated system had small discrepancies with those calculated by the observers, Bland-Altman analysis showed 95 % concordance in three pairs of comparisons, while in one it was 90 %, indicating that this system is a reliable and inexpensive alternative for the study of continuous SAB in rodents. |
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Here, the design of an automated Y-maze equipped with three infrared optocouplers per arm, and commanded by a reduced instruction set computer (RISC) microcontroller is described. The software was devised for recording only true entries and exits to the arms. Experimental settings are programmed via a keyboard with three buttons and a display. The sequence of arm entries and the time spent in each arm and the neutral zone (NZ) are saved as a text file in a non-volatile memory for later transfer to a USB flash memory. Data files are analyzed with a program developed under LabVIEW® environment, and the results are exported to an Excel® spreadsheet file. Variables measured are: latency to exit the starting arm, sequence and number of arm entries, number of alternations, alternation percentage, and cumulative times spent in each arm and NZ. The automated Y-maze accurately detected the SAB decrease produced in rats by the muscarinic antagonist trihexyphenidyl, and its reversal by caffeine, having 100 % concordance with the alternation percentages calculated by two trained observers who independently watched videos of the same experiments. Although the values of time spent in the arms and NZ measured by the automated system had small discrepancies with those calculated by the observers, Bland-Altman analysis showed 95 % concordance in three pairs of comparisons, while in one it was 90 %, indicating that this system is a reliable and inexpensive alternative for the study of continuous SAB in rodents.</description><identifier>ISSN: 1554-3528</identifier><identifier>EISSN: 1554-3528</identifier><identifier>DOI: 10.3758/s13428-015-0674-0</identifier><identifier>PMID: 26563396</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Animal behavior ; Animal memory ; Animals ; Behavior, Animal ; Behavioral Science and Psychology ; Cognitive Psychology ; Controllers ; Female ; Male ; Maze Learning ; Memory, Short-Term ; Microcomputers ; Motor Activity ; Performance evaluation ; Psychology ; Psychology, Experimental - instrumentation ; Psychology, Experimental - methods ; Rats ; Rats, Wistar ; Rodents ; Software</subject><ispartof>Behavior research methods, 2016-12, Vol.48 (4), p.1631-1643</ispartof><rights>Psychonomic Society, Inc. 2015</rights><rights>Copyright Springer Science & Business Media Dec 2016</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c482t-8064b2b694b2e401fe33249807af7b9ec3107283365ccbf805d9454b3455e0ab3</citedby><cites>FETCH-LOGICAL-c482t-8064b2b694b2e401fe33249807af7b9ec3107283365ccbf805d9454b3455e0ab3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26563396$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Heredia-López, Francisco J.</creatorcontrib><creatorcontrib>Álvarez-Cervera, Fernando J.</creatorcontrib><creatorcontrib>Collí-Alfaro, José G.</creatorcontrib><creatorcontrib>Bata-García, José L.</creatorcontrib><creatorcontrib>Arankowsky-Sandoval, Gloria</creatorcontrib><creatorcontrib>Góngora-Alfaro, José L.</creatorcontrib><title>An automated Y-maze based on a reduced instruction set computer (RISC) microcontroller for the assessment of continuous spontaneous alternation in rats</title><title>Behavior research methods</title><addtitle>Behav Res</addtitle><addtitle>Behav Res Methods</addtitle><description>Continuous spontaneous alternation behavior (SAB) in a Y-maze is used for evaluating working memory in rodents. Here, the design of an automated Y-maze equipped with three infrared optocouplers per arm, and commanded by a reduced instruction set computer (RISC) microcontroller is described. The software was devised for recording only true entries and exits to the arms. Experimental settings are programmed via a keyboard with three buttons and a display. The sequence of arm entries and the time spent in each arm and the neutral zone (NZ) are saved as a text file in a non-volatile memory for later transfer to a USB flash memory. Data files are analyzed with a program developed under LabVIEW® environment, and the results are exported to an Excel® spreadsheet file. Variables measured are: latency to exit the starting arm, sequence and number of arm entries, number of alternations, alternation percentage, and cumulative times spent in each arm and NZ. The automated Y-maze accurately detected the SAB decrease produced in rats by the muscarinic antagonist trihexyphenidyl, and its reversal by caffeine, having 100 % concordance with the alternation percentages calculated by two trained observers who independently watched videos of the same experiments. Although the values of time spent in the arms and NZ measured by the automated system had small discrepancies with those calculated by the observers, Bland-Altman analysis showed 95 % concordance in three pairs of comparisons, while in one it was 90 %, indicating that this system is a reliable and inexpensive alternative for the study of continuous SAB in rodents.</description><subject>Animal behavior</subject><subject>Animal memory</subject><subject>Animals</subject><subject>Behavior, Animal</subject><subject>Behavioral Science and Psychology</subject><subject>Cognitive Psychology</subject><subject>Controllers</subject><subject>Female</subject><subject>Male</subject><subject>Maze Learning</subject><subject>Memory, Short-Term</subject><subject>Microcomputers</subject><subject>Motor Activity</subject><subject>Performance evaluation</subject><subject>Psychology</subject><subject>Psychology, Experimental - instrumentation</subject><subject>Psychology, Experimental - methods</subject><subject>Rats</subject><subject>Rats, Wistar</subject><subject>Rodents</subject><subject>Software</subject><issn>1554-3528</issn><issn>1554-3528</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNp1kctu1TAQhiMEoqXwAGyQJTZlkeJ7nGV1xKVSpUpcFqwsx2cCqRL74LEX9EX6unVIQRUSG3su3_we-W-al4yeiU6Zt8iE5KalTLVUd7Klj5pjppRsheLm8YP4qHmGeE2pMJzJp80R10oL0evj5vY8EFdyXFyGPfnWLu4GyOCwJrF2SIJ98TWZAuZUfJ5qFSETH5dDyZDI6aeLz7s3ZJl8ij6GnOI81_IYE8k_gDhEQFwgZBJHsgJTKLEgwUONXYA1dnNVCu63-BRIchmfN09GNyO8uL9Pmq_v333ZfWwvrz5c7M4vWy8Nz62hWg580H09QVI2ghBc9oZ2buyGHrxgtONGCK28H0ZD1b6XSg5CKgXUDeKkOd10Dyn-LIDZLhN6mOdtNcsM11pSwfuKvv4HvY6lrj2vlBSUSdOpSrGNqv-BmGC0hzQtLv2yjNrVNbu5ZqtrdnXN0jrz6l65DAvs_078sakCfAOwtsJ3SA-e_q_qHYNto9M</recordid><startdate>20161201</startdate><enddate>20161201</enddate><creator>Heredia-López, Francisco J.</creator><creator>Álvarez-Cervera, Fernando J.</creator><creator>Collí-Alfaro, José G.</creator><creator>Bata-García, José L.</creator><creator>Arankowsky-Sandoval, Gloria</creator><creator>Góngora-Alfaro, José L.</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>4T-</scope><scope>7TK</scope><scope>K9.</scope><scope>7X8</scope></search><sort><creationdate>20161201</creationdate><title>An automated Y-maze based on a reduced instruction set computer (RISC) microcontroller for the assessment of continuous spontaneous alternation in rats</title><author>Heredia-López, Francisco J. ; Álvarez-Cervera, Fernando J. ; Collí-Alfaro, José G. ; Bata-García, José L. ; Arankowsky-Sandoval, Gloria ; Góngora-Alfaro, José L.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c482t-8064b2b694b2e401fe33249807af7b9ec3107283365ccbf805d9454b3455e0ab3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Animal behavior</topic><topic>Animal memory</topic><topic>Animals</topic><topic>Behavior, Animal</topic><topic>Behavioral Science and Psychology</topic><topic>Cognitive Psychology</topic><topic>Controllers</topic><topic>Female</topic><topic>Male</topic><topic>Maze Learning</topic><topic>Memory, Short-Term</topic><topic>Microcomputers</topic><topic>Motor Activity</topic><topic>Performance evaluation</topic><topic>Psychology</topic><topic>Psychology, Experimental - instrumentation</topic><topic>Psychology, Experimental - methods</topic><topic>Rats</topic><topic>Rats, Wistar</topic><topic>Rodents</topic><topic>Software</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Heredia-López, Francisco J.</creatorcontrib><creatorcontrib>Álvarez-Cervera, Fernando J.</creatorcontrib><creatorcontrib>Collí-Alfaro, José G.</creatorcontrib><creatorcontrib>Bata-García, José L.</creatorcontrib><creatorcontrib>Arankowsky-Sandoval, Gloria</creatorcontrib><creatorcontrib>Góngora-Alfaro, José L.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Docstoc</collection><collection>Neurosciences Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>MEDLINE - Academic</collection><jtitle>Behavior research methods</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Heredia-López, Francisco J.</au><au>Álvarez-Cervera, Fernando J.</au><au>Collí-Alfaro, José G.</au><au>Bata-García, José L.</au><au>Arankowsky-Sandoval, Gloria</au><au>Góngora-Alfaro, José L.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>An automated Y-maze based on a reduced instruction set computer (RISC) microcontroller for the assessment of continuous spontaneous alternation in rats</atitle><jtitle>Behavior research methods</jtitle><stitle>Behav Res</stitle><addtitle>Behav Res Methods</addtitle><date>2016-12-01</date><risdate>2016</risdate><volume>48</volume><issue>4</issue><spage>1631</spage><epage>1643</epage><pages>1631-1643</pages><issn>1554-3528</issn><eissn>1554-3528</eissn><abstract>Continuous spontaneous alternation behavior (SAB) in a Y-maze is used for evaluating working memory in rodents. Here, the design of an automated Y-maze equipped with three infrared optocouplers per arm, and commanded by a reduced instruction set computer (RISC) microcontroller is described. The software was devised for recording only true entries and exits to the arms. Experimental settings are programmed via a keyboard with three buttons and a display. The sequence of arm entries and the time spent in each arm and the neutral zone (NZ) are saved as a text file in a non-volatile memory for later transfer to a USB flash memory. Data files are analyzed with a program developed under LabVIEW® environment, and the results are exported to an Excel® spreadsheet file. Variables measured are: latency to exit the starting arm, sequence and number of arm entries, number of alternations, alternation percentage, and cumulative times spent in each arm and NZ. The automated Y-maze accurately detected the SAB decrease produced in rats by the muscarinic antagonist trihexyphenidyl, and its reversal by caffeine, having 100 % concordance with the alternation percentages calculated by two trained observers who independently watched videos of the same experiments. Although the values of time spent in the arms and NZ measured by the automated system had small discrepancies with those calculated by the observers, Bland-Altman analysis showed 95 % concordance in three pairs of comparisons, while in one it was 90 %, indicating that this system is a reliable and inexpensive alternative for the study of continuous SAB in rodents.</abstract><cop>New York</cop><pub>Springer US</pub><pmid>26563396</pmid><doi>10.3758/s13428-015-0674-0</doi><tpages>13</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animal behavior Animal memory Animals Behavior, Animal Behavioral Science and Psychology Cognitive Psychology Controllers Female Male Maze Learning Memory, Short-Term Microcomputers Motor Activity Performance evaluation Psychology Psychology, Experimental - instrumentation Psychology, Experimental - methods Rats Rats, Wistar Rodents Software |
title | An automated Y-maze based on a reduced instruction set computer (RISC) microcontroller for the assessment of continuous spontaneous alternation in rats |
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