A 425 T>C polymorphism in complement C7 association with resistance to Aeromonas hydrophila in grass carp

Aeromonas hydrophila, a widespread bacterium in the aquatic environment, causes hemorrhagic septicemia in fish. In the last decade, the disease has caused mass mortalities and tremendous economic loss in cultured fish. The complement component C7 is a terminal component of complement that interacts...

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Bibliographic Details
Published in:Genetics and molecular research 2016-01, Vol.15 (1)
Main Authors: Shen, Y B, Zhang, J B, Fu, J J, Xu, X Y, Li, J L, Wang, R Q, Xuan, Y F
Format: Article
Language:English
Subjects:
Aeromonas hydrophila
Aeromonas hydrophila - pathogenicity
Animals
Carps - genetics
Carps - metabolism
Carps - microbiology
Complement C7 - genetics
Ctenopharyngodon idella
Genotype
Haplotypes
Polymorphism, Single Nucleotide - genetics
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Summary:Aeromonas hydrophila, a widespread bacterium in the aquatic environment, causes hemorrhagic septicemia in fish. In the last decade, the disease has caused mass mortalities and tremendous economic loss in cultured fish. The complement component C7 is a terminal component of complement that interacts in a sequence of polymerization reactions with other terminal complement components to form a membrane attack complex. The formation of the membrane attack complex creates a pore in the membranes of certain pathogen that can lead to their death. The objective of this study was to identify single nucleotide polymorphisms (SNPs) in the C7 gene and to assess their association with A. hydrophila resistance in grass carp. A resource population consisting of 186 susceptible and 191 resistant grass carp was constructed. We sequenced a total of 7826 bp of the C7 gene and identified 6 SNPs that were genotyped in the resource population. The SNP -1575 A>C was positioned in the promoter region of the gene. The SNP 425 C>T identified in the coding exon was a synonymous substitution in the fourth exon. Statistical analysis showed that SNP 425 C>T was associated with the incidence of hemorrhagic septicemia. The SNPs -1575 A>C, -688 T>C, and -266 A>C were highly linked together (r(2) > 0.85). No haplotypes generated with these 3 SNPs were associated with resistance to A. hydrophila in grass carp. These findings suggest that the 425 C>T polymorphism in C7 gene may be a significant molecular marker for resistance to A. hydrophila in grass carp.
ISSN:1676-5680
1676-5680
DOI:10.4238/gmr.15014526