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Storage stability of exhaled breath on Tenax TA
Exhaled breath is coming to the forefront of non-invasive biomarker discovery efforts. Concentration of exhaled breath volatile organic compounds (VOCs) on thermal desorption (TD) tubes with subsequent analysis by gas chromatography-mass spectrometry (GC-MS) has dominated this field. As discovery ex...
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Published in: | Journal of breath research 2016-10, Vol.10 (4), p.046008-046008 |
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container_title | Journal of breath research |
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creator | Harshman, Sean W Mani, Nilan Geier, Brian A Kwak, Jae Shepard, Phillip Fan, Maomian Sudberry, Gregory L Mayes, Ryan S Ott, Darrin K Martin, Jennifer A Grigsby, Claude C |
description | Exhaled breath is coming to the forefront of non-invasive biomarker discovery efforts. Concentration of exhaled breath volatile organic compounds (VOCs) on thermal desorption (TD) tubes with subsequent analysis by gas chromatography-mass spectrometry (GC-MS) has dominated this field. As discovery experimentation increases in frequency, the need to evaluate the long-term storage stability of exhaled breath VOCs on thermal desorption adsorbent material is critical. To address this gap, exhaled breath was loaded on Tenax TA thermal desorption tubes and stored at various temperature conditions. 74 VOCs, 56 of which have been previously uncharacterized, were monitored using GC-MS over a period of 31 d. The results suggest that storage of exhaled breath at cold temperatures (4 °C) provides the most consistent retention of exhaled breath VOCs temporally. Samples were determined to be stable up to 14 d across storage conditions prior to gaining or losing 1-2 standard deviations in abundance. Through gene set enrichment analysis (GSEA), certain chemical classes were found to be positively (acids) or negatively (sulfur-containing) enriched temporally. By means of field sample collections, the effect of storage and shipping was found to be similar to those studies preformed in the laboratory at 4 °C. Collectively this study not only provides recommendations for proper storage conditions and storage length, but also illustrates the use of GSEA to exhaled breath based GC-MS data. |
doi_str_mv | 10.1088/1752-7155/10/4/046008 |
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Concentration of exhaled breath volatile organic compounds (VOCs) on thermal desorption (TD) tubes with subsequent analysis by gas chromatography-mass spectrometry (GC-MS) has dominated this field. As discovery experimentation increases in frequency, the need to evaluate the long-term storage stability of exhaled breath VOCs on thermal desorption adsorbent material is critical. To address this gap, exhaled breath was loaded on Tenax TA thermal desorption tubes and stored at various temperature conditions. 74 VOCs, 56 of which have been previously uncharacterized, were monitored using GC-MS over a period of 31 d. The results suggest that storage of exhaled breath at cold temperatures (4 °C) provides the most consistent retention of exhaled breath VOCs temporally. Samples were determined to be stable up to 14 d across storage conditions prior to gaining or losing 1-2 standard deviations in abundance. Through gene set enrichment analysis (GSEA), certain chemical classes were found to be positively (acids) or negatively (sulfur-containing) enriched temporally. By means of field sample collections, the effect of storage and shipping was found to be similar to those studies preformed in the laboratory at 4 °C. Collectively this study not only provides recommendations for proper storage conditions and storage length, but also illustrates the use of GSEA to exhaled breath based GC-MS data.</description><identifier>ISSN: 1752-7155</identifier><identifier>ISSN: 1752-7163</identifier><identifier>EISSN: 1752-7163</identifier><identifier>DOI: 10.1088/1752-7155/10/4/046008</identifier><identifier>PMID: 27732570</identifier><identifier>CODEN: JBROBW</identifier><language>eng</language><publisher>England: IOP Publishing</publisher><subject>Breath Tests - methods ; Exhalation ; exhaled breath ; Gas Chromatography-Mass Spectrometry ; GC-MS ; Humans ; Polymers - analysis ; Principal Component Analysis ; stability ; Temperature ; Tenax TA ; thermal desorption ; VOCs ; Volatile organic compounds ; Volatile Organic Compounds - analysis</subject><ispartof>Journal of breath research, 2016-10, Vol.10 (4), p.046008-046008</ispartof><rights>2016 IOP Publishing Ltd</rights><rights>2016 IOP Publishing Ltd. 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Breath Res</addtitle><description>Exhaled breath is coming to the forefront of non-invasive biomarker discovery efforts. Concentration of exhaled breath volatile organic compounds (VOCs) on thermal desorption (TD) tubes with subsequent analysis by gas chromatography-mass spectrometry (GC-MS) has dominated this field. As discovery experimentation increases in frequency, the need to evaluate the long-term storage stability of exhaled breath VOCs on thermal desorption adsorbent material is critical. To address this gap, exhaled breath was loaded on Tenax TA thermal desorption tubes and stored at various temperature conditions. 74 VOCs, 56 of which have been previously uncharacterized, were monitored using GC-MS over a period of 31 d. The results suggest that storage of exhaled breath at cold temperatures (4 °C) provides the most consistent retention of exhaled breath VOCs temporally. Samples were determined to be stable up to 14 d across storage conditions prior to gaining or losing 1-2 standard deviations in abundance. Through gene set enrichment analysis (GSEA), certain chemical classes were found to be positively (acids) or negatively (sulfur-containing) enriched temporally. By means of field sample collections, the effect of storage and shipping was found to be similar to those studies preformed in the laboratory at 4 °C. Collectively this study not only provides recommendations for proper storage conditions and storage length, but also illustrates the use of GSEA to exhaled breath based GC-MS data.</description><subject>Breath Tests - methods</subject><subject>Exhalation</subject><subject>exhaled breath</subject><subject>Gas Chromatography-Mass Spectrometry</subject><subject>GC-MS</subject><subject>Humans</subject><subject>Polymers - analysis</subject><subject>Principal Component Analysis</subject><subject>stability</subject><subject>Temperature</subject><subject>Tenax TA</subject><subject>thermal desorption</subject><subject>VOCs</subject><subject>Volatile organic compounds</subject><subject>Volatile Organic Compounds - analysis</subject><issn>1752-7155</issn><issn>1752-7163</issn><issn>1752-7163</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNp9kM9LwzAUx4Mobk7_BKXgxUvtS9I06XEMf8HAg72HNEldR7fMpIXtv7elc4IHTy88Pu_7Xj4I3WJ4xCBEgjkjMceMJRiSNIE0AxBnaHrsZ_T89GZsgq5CWANkKYj8Ek0I55QwDlOUfLTOq08bhVaVdVO3h8hVkd2vVGNNVHqr2lXktlFht2ofFfNrdFGpJtibY52h4vmpWLzGy_eXt8V8GeuUZG2cUWBlxTXWJhNYaQomJ4rlHJeiEsLkKROlZmYgcGU1yxVURFccW2aMoDP0MMbuvPvqbGjlpg7aNo3aWtcFiQVlKab9N3v0_g-6dp3f9sdJwimFLCcEeoqNlPYuBG8rufP1RvmDxCAHoXKQJQdZQyeVo9B-7u6Y3pUba05TPwZ7AI9A7Xa_m_8P_QbJzXz4</recordid><startdate>20161012</startdate><enddate>20161012</enddate><creator>Harshman, Sean W</creator><creator>Mani, Nilan</creator><creator>Geier, Brian A</creator><creator>Kwak, Jae</creator><creator>Shepard, Phillip</creator><creator>Fan, Maomian</creator><creator>Sudberry, Gregory L</creator><creator>Mayes, Ryan S</creator><creator>Ott, Darrin K</creator><creator>Martin, Jennifer A</creator><creator>Grigsby, Claude C</creator><general>IOP Publishing</general><scope>O3W</scope><scope>TSCCA</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>K9.</scope><scope>7X8</scope></search><sort><creationdate>20161012</creationdate><title>Storage stability of exhaled breath on Tenax TA</title><author>Harshman, Sean W ; Mani, Nilan ; Geier, Brian A ; Kwak, Jae ; Shepard, Phillip ; Fan, Maomian ; Sudberry, Gregory L ; Mayes, Ryan S ; Ott, Darrin K ; Martin, Jennifer A ; Grigsby, Claude C</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c426t-6305bf7c1cd681ac30d92a5971b8f88d9458bc5d7c1c1fec59a0f2cf71e5dd83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Breath Tests - methods</topic><topic>Exhalation</topic><topic>exhaled breath</topic><topic>Gas Chromatography-Mass Spectrometry</topic><topic>GC-MS</topic><topic>Humans</topic><topic>Polymers - analysis</topic><topic>Principal Component Analysis</topic><topic>stability</topic><topic>Temperature</topic><topic>Tenax TA</topic><topic>thermal desorption</topic><topic>VOCs</topic><topic>Volatile organic compounds</topic><topic>Volatile Organic Compounds - analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Harshman, Sean W</creatorcontrib><creatorcontrib>Mani, Nilan</creatorcontrib><creatorcontrib>Geier, Brian A</creatorcontrib><creatorcontrib>Kwak, Jae</creatorcontrib><creatorcontrib>Shepard, Phillip</creatorcontrib><creatorcontrib>Fan, Maomian</creatorcontrib><creatorcontrib>Sudberry, Gregory L</creatorcontrib><creatorcontrib>Mayes, Ryan S</creatorcontrib><creatorcontrib>Ott, Darrin K</creatorcontrib><creatorcontrib>Martin, Jennifer A</creatorcontrib><creatorcontrib>Grigsby, Claude C</creatorcontrib><collection>Open Access: IOP Publishing Free Content</collection><collection>IOPscience (Open Access)</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of breath research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Harshman, Sean W</au><au>Mani, Nilan</au><au>Geier, Brian A</au><au>Kwak, Jae</au><au>Shepard, Phillip</au><au>Fan, Maomian</au><au>Sudberry, Gregory L</au><au>Mayes, Ryan S</au><au>Ott, Darrin K</au><au>Martin, Jennifer A</au><au>Grigsby, Claude C</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Storage stability of exhaled breath on Tenax TA</atitle><jtitle>Journal of breath research</jtitle><stitle>JBR</stitle><addtitle>J. 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The results suggest that storage of exhaled breath at cold temperatures (4 °C) provides the most consistent retention of exhaled breath VOCs temporally. Samples were determined to be stable up to 14 d across storage conditions prior to gaining or losing 1-2 standard deviations in abundance. Through gene set enrichment analysis (GSEA), certain chemical classes were found to be positively (acids) or negatively (sulfur-containing) enriched temporally. By means of field sample collections, the effect of storage and shipping was found to be similar to those studies preformed in the laboratory at 4 °C. Collectively this study not only provides recommendations for proper storage conditions and storage length, but also illustrates the use of GSEA to exhaled breath based GC-MS data.</abstract><cop>England</cop><pub>IOP Publishing</pub><pmid>27732570</pmid><doi>10.1088/1752-7155/10/4/046008</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Breath Tests - methods Exhalation exhaled breath Gas Chromatography-Mass Spectrometry GC-MS Humans Polymers - analysis Principal Component Analysis stability Temperature Tenax TA thermal desorption VOCs Volatile organic compounds Volatile Organic Compounds - analysis |
title | Storage stability of exhaled breath on Tenax TA |
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