Mitochondrial DNA deletion percentage in sun exposed and non sun exposed skin

• Published in: Journal of photochemistry and photobiology. B, Biology Biology, 2016-12, Vol.165, p.277-282
• Main Authors: Powers, Julia M., Murphy, Gillian, Ralph, Nikki, O’Gorman, Susan M., Murphy, James E.J.
• Format: Article
• Language: English
• Subjects: Aged; Biomarker; Cancer; Deoxyribonucleic acid; DNA; DNA, Mitochondrial - genetics; Exposure; Female; Genetic code; Genomes; Habits; Health risks; Humans; Male; Melanoma; Middle Aged; Mitochondrial DNA; Non-melanoma skin cancer; Patients; Skin - radiation effects; Skin cancer; Sun; Sunlight; Ultraviolet radiation
• ISSN: 1011-1344; 1873-2682
• DOI: 10.1016/j.jphotobiol.2016.10.030

The percentages of mitochondrial genomes carrying the mtDNA3895 and the mtDNA4977 (common) deletion were quantified in sun exposed and non sun exposed skin biopsies, for five cohorts of patients varying either in sun exposure profile, age or skin cancer status. Non-melanoma skin cancer diagnoses are rising in Ireland and worldwide [12] but most risk prediction is based on subjective visual estimations of sun exposure history. A quantitative objective test for pre-neoplastic markers may result in better adherence to sun protective behaviours. Mitochondrial DNA (mtDNA) is known to be subject to the loss of a significant proportion of specific sections of genetic code due to exposure to ultraviolet light in sunlight. Although one such deletion has been deemed more sensitive, another, called the mtDNA4977 or common deletion, has proved to be a more useful indicator of possible risk in this study. Quantitative molecular analysis was carried out to determine the percentage of genomes carrying the deletion using non sun exposed and sun exposed skin biopsies in cohorts of patients with high or low sun exposure profiles and two high exposure groups undergoing treatment for NMSC. Results indicate that mtDNA deletions correlate to sun exposure; in groups with high sun exposure habits a significant increase in deletion number in exposed over non sun exposed skin occurred. An increase in deletion percentage was also seen in older cohorts compared to the younger group. The mtDNA3895 deletion was detected in small amounts in exposed skin of many patients, the mtDNA4977 common deletion, although present to some extent in non sun exposed skin, is suggested to be the more reliable and easily detected marker. In all cohorts except the younger group with relatively lower sun exposure, the mtDNA4977 deletion was more frequent in sun exposed skin samples compared to non-sun exposed skin. •Mitochondrial DNA (mtDNA) deletions accumulate and persist throughout life.•mtDNA deletions were quantified in cohorts with different sun exposure histories.•Biopsies from non sun exposed, sun exposed and perilesional skin were studied.•Deletion percentages were found to be higher in sun exposed and perilesional skin.•MtDNA deletions can form part of a suite of skin cancer risk predictors.