Loading…
Characterization of mutant spectra generated by a forward mutational assay for gene A of ΦX174 from ENU-treated transgenic mouse embryonic cell line PX-2
The sensitivity of in vivo transgenic mutation assays benefits from the sequencing of mutations, although the large number of possible mutations hinders high throughput sequencing. A forward mutational assay exists for ΦX174 that requires an altered, functional ΦX174 protein and therefore should hav...
Saved in:
Published in: | Environmental and molecular mutagenesis 2002, Vol.39 (1), p.55-68 |
---|---|
Main Authors: | , , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c4163-e7c57bdaf12c19e1ebc4ea59540bbfce109599a9f84a45dd8c464795a431e3183 |
---|---|
cites | cdi_FETCH-LOGICAL-c4163-e7c57bdaf12c19e1ebc4ea59540bbfce109599a9f84a45dd8c464795a431e3183 |
container_end_page | 68 |
container_issue | 1 |
container_start_page | 55 |
container_title | Environmental and molecular mutagenesis |
container_volume | 39 |
creator | Valentine, Carrie R. Montgomery, Beverly A. Miller, Scott G. Delongchamp, Robert R. Fane, Bentley A. Malling, Heinrich V. |
description | The sensitivity of in vivo transgenic mutation assays benefits from the sequencing of mutations, although the large number of possible mutations hinders high throughput sequencing. A forward mutational assay exists for ΦX174 that requires an altered, functional ΦX174 protein and therefore should have fewer targets (sense, base‐pair substitutions) than forward assays that inactivate a protein. We investigated this assay to determine the number of targets and their suitability for detecting a known mutagen, N‐ethyl‐N‐nitrosourea (ENU). We identified 25 target sites and 33 different mutations in ΦX174 gene A after sequencing over 350 spontaneous and ENU‐induced mutants, mostly from mouse embryonic cell line PX‐2 isolated from mice transgenic for ΦX174 am3, cs70 (line 54). All six types of base‐pair substitution were represented among both the spontaneous and ENU‐treated mutant spectra. The mutant spectra from cells treated with 200 and 400 μg/ml ENU were both highly different from the spontaneous spectrum (P < 0.000001) but not from each other. The dose trend was significant (P < 0.0001) for a linear regression of mutant frequencies (R2 = 0.79), with a ninefold increase in mutant frequency at the 400 μg/ml dose. The spontaneous mutant frequency was 1.9 × 10−5 and the spontaneous spectrum occurred at 11 target base pairs with 15 different mutations. Thirteen mutations at 12 targets were identified only from ENU‐treated cells. Seven mutations had highly significant increases with ENU treatment (P < 0.0001) and 15 showed significant increases. The results suggest that the ΦX174 forward assay might be developed into a sensitive, inexpensive in vivo mutagenicity assay. Environ. Mol. Mutagen. 39:55–68, 2002 Published 2002 Wiley‐Liss, Inc. |
doi_str_mv | 10.1002/em.10043 |
format | article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_18485318</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>18485318</sourcerecordid><originalsourceid>FETCH-LOGICAL-c4163-e7c57bdaf12c19e1ebc4ea59540bbfce109599a9f84a45dd8c464795a431e3183</originalsourceid><addsrcrecordid>eNp10cFu1DAQBmALgehSkHgC5AuIS8COncQ-VsvSRVoWkKhacbEmzgQCcbK1syrhUXgAHodnwtkN9MTJsvz5n9EMIY85e8EZS1-im04p7pAFZ1olaarYXbJgSoskz3V6Qh6E8JUxzqVO75MTzhUXqS4W5OfyC3iwA_rmBwxN39G-pm4_QDfQsEM7eKCfsUMPA1a0HCnQuvc34KuDmn5ASyEEGKeHg6VnU8jvX1e8kLT2vaOr7UUyeDxkxMQuRNZY6vp9QIqu9GM_3S22LW2bmPD-Kkkfkns1tAEfzecpuXi9-rhcJ5t352-WZ5vESp6LBAubFWUFNU8t18ixtBIh05lkZVlbjAPJtAZdKwkyqyplZS4LnYEUHAVX4pQ8O-bufH-9xzAY14SpFegwNmi4kio7wudHaH0fgsfa7HzjwI-GMzPtwaAzhz1E-mTO3JcOq1s4Dz6CpzOAYKGt41BsE26diE1KlkeXHN1N0-L434Jm9fZv4dk3YcDv_zz4byYvRJGZy-25-fRh_epyuxFmLf4As1Ku1g</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>18485318</pqid></control><display><type>article</type><title>Characterization of mutant spectra generated by a forward mutational assay for gene A of ΦX174 from ENU-treated transgenic mouse embryonic cell line PX-2</title><source>Wiley-Blackwell Read & Publish Collection</source><creator>Valentine, Carrie R. ; Montgomery, Beverly A. ; Miller, Scott G. ; Delongchamp, Robert R. ; Fane, Bentley A. ; Malling, Heinrich V.</creator><creatorcontrib>Valentine, Carrie R. ; Montgomery, Beverly A. ; Miller, Scott G. ; Delongchamp, Robert R. ; Fane, Bentley A. ; Malling, Heinrich V.</creatorcontrib><description>The sensitivity of in vivo transgenic mutation assays benefits from the sequencing of mutations, although the large number of possible mutations hinders high throughput sequencing. A forward mutational assay exists for ΦX174 that requires an altered, functional ΦX174 protein and therefore should have fewer targets (sense, base‐pair substitutions) than forward assays that inactivate a protein. We investigated this assay to determine the number of targets and their suitability for detecting a known mutagen, N‐ethyl‐N‐nitrosourea (ENU). We identified 25 target sites and 33 different mutations in ΦX174 gene A after sequencing over 350 spontaneous and ENU‐induced mutants, mostly from mouse embryonic cell line PX‐2 isolated from mice transgenic for ΦX174 am3, cs70 (line 54). All six types of base‐pair substitution were represented among both the spontaneous and ENU‐treated mutant spectra. The mutant spectra from cells treated with 200 and 400 μg/ml ENU were both highly different from the spontaneous spectrum (P < 0.000001) but not from each other. The dose trend was significant (P < 0.0001) for a linear regression of mutant frequencies (R2 = 0.79), with a ninefold increase in mutant frequency at the 400 μg/ml dose. The spontaneous mutant frequency was 1.9 × 10−5 and the spontaneous spectrum occurred at 11 target base pairs with 15 different mutations. Thirteen mutations at 12 targets were identified only from ENU‐treated cells. Seven mutations had highly significant increases with ENU treatment (P < 0.0001) and 15 showed significant increases. The results suggest that the ΦX174 forward assay might be developed into a sensitive, inexpensive in vivo mutagenicity assay. Environ. Mol. Mutagen. 39:55–68, 2002 Published 2002 Wiley‐Liss, Inc.</description><identifier>ISSN: 0893-6692</identifier><identifier>EISSN: 1098-2280</identifier><identifier>DOI: 10.1002/em.10043</identifier><identifier>PMID: 11813297</identifier><identifier>CODEN: EMMUEG</identifier><language>eng</language><publisher>New York: John Wiley & Sons, Inc</publisher><subject>Animals ; Bacteriophage phi X 174 - genetics ; Base Pair Mismatch ; Biological and medical sciences ; Cell Line ; Cell Survival - drug effects ; Cell Survival - genetics ; Chemical mutagenesis ; Dose-Response Relationship, Drug ; Drug toxicity and drugs side effects treatment ; ENU ; Escherichia coli - genetics ; Ethylnitrosourea - toxicity ; Fundamental and applied biological sciences. Psychology ; gene A ; Medical sciences ; Mice ; Mice, Transgenic ; Miscellaneous (drug allergy, mutagens, teratogens...) ; Molecular and cellular biology ; Molecular genetics ; mouse cell ; Mutagenesis. Repair ; Mutagenicity Tests - methods ; Mutagens - toxicity ; Mutation ; Pharmacology. Drug treatments ; phiX174 ; Toxicology ; transgenic</subject><ispartof>Environmental and molecular mutagenesis, 2002, Vol.39 (1), p.55-68</ispartof><rights>Published 2002 Wiley‐Liss, Inc.</rights><rights>2002 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4163-e7c57bdaf12c19e1ebc4ea59540bbfce109599a9f84a45dd8c464795a431e3183</citedby><cites>FETCH-LOGICAL-c4163-e7c57bdaf12c19e1ebc4ea59540bbfce109599a9f84a45dd8c464795a431e3183</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,4024,27923,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=13464406$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11813297$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Valentine, Carrie R.</creatorcontrib><creatorcontrib>Montgomery, Beverly A.</creatorcontrib><creatorcontrib>Miller, Scott G.</creatorcontrib><creatorcontrib>Delongchamp, Robert R.</creatorcontrib><creatorcontrib>Fane, Bentley A.</creatorcontrib><creatorcontrib>Malling, Heinrich V.</creatorcontrib><title>Characterization of mutant spectra generated by a forward mutational assay for gene A of ΦX174 from ENU-treated transgenic mouse embryonic cell line PX-2</title><title>Environmental and molecular mutagenesis</title><addtitle>Environ. Mol. Mutagen</addtitle><description>The sensitivity of in vivo transgenic mutation assays benefits from the sequencing of mutations, although the large number of possible mutations hinders high throughput sequencing. A forward mutational assay exists for ΦX174 that requires an altered, functional ΦX174 protein and therefore should have fewer targets (sense, base‐pair substitutions) than forward assays that inactivate a protein. We investigated this assay to determine the number of targets and their suitability for detecting a known mutagen, N‐ethyl‐N‐nitrosourea (ENU). We identified 25 target sites and 33 different mutations in ΦX174 gene A after sequencing over 350 spontaneous and ENU‐induced mutants, mostly from mouse embryonic cell line PX‐2 isolated from mice transgenic for ΦX174 am3, cs70 (line 54). All six types of base‐pair substitution were represented among both the spontaneous and ENU‐treated mutant spectra. The mutant spectra from cells treated with 200 and 400 μg/ml ENU were both highly different from the spontaneous spectrum (P < 0.000001) but not from each other. The dose trend was significant (P < 0.0001) for a linear regression of mutant frequencies (R2 = 0.79), with a ninefold increase in mutant frequency at the 400 μg/ml dose. The spontaneous mutant frequency was 1.9 × 10−5 and the spontaneous spectrum occurred at 11 target base pairs with 15 different mutations. Thirteen mutations at 12 targets were identified only from ENU‐treated cells. Seven mutations had highly significant increases with ENU treatment (P < 0.0001) and 15 showed significant increases. The results suggest that the ΦX174 forward assay might be developed into a sensitive, inexpensive in vivo mutagenicity assay. Environ. Mol. Mutagen. 39:55–68, 2002 Published 2002 Wiley‐Liss, Inc.</description><subject>Animals</subject><subject>Bacteriophage phi X 174 - genetics</subject><subject>Base Pair Mismatch</subject><subject>Biological and medical sciences</subject><subject>Cell Line</subject><subject>Cell Survival - drug effects</subject><subject>Cell Survival - genetics</subject><subject>Chemical mutagenesis</subject><subject>Dose-Response Relationship, Drug</subject><subject>Drug toxicity and drugs side effects treatment</subject><subject>ENU</subject><subject>Escherichia coli - genetics</subject><subject>Ethylnitrosourea - toxicity</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>gene A</subject><subject>Medical sciences</subject><subject>Mice</subject><subject>Mice, Transgenic</subject><subject>Miscellaneous (drug allergy, mutagens, teratogens...)</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>mouse cell</subject><subject>Mutagenesis. Repair</subject><subject>Mutagenicity Tests - methods</subject><subject>Mutagens - toxicity</subject><subject>Mutation</subject><subject>Pharmacology. Drug treatments</subject><subject>phiX174</subject><subject>Toxicology</subject><subject>transgenic</subject><issn>0893-6692</issn><issn>1098-2280</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2002</creationdate><recordtype>article</recordtype><recordid>eNp10cFu1DAQBmALgehSkHgC5AuIS8COncQ-VsvSRVoWkKhacbEmzgQCcbK1syrhUXgAHodnwtkN9MTJsvz5n9EMIY85e8EZS1-im04p7pAFZ1olaarYXbJgSoskz3V6Qh6E8JUxzqVO75MTzhUXqS4W5OfyC3iwA_rmBwxN39G-pm4_QDfQsEM7eKCfsUMPA1a0HCnQuvc34KuDmn5ASyEEGKeHg6VnU8jvX1e8kLT2vaOr7UUyeDxkxMQuRNZY6vp9QIqu9GM_3S22LW2bmPD-Kkkfkns1tAEfzecpuXi9-rhcJ5t352-WZ5vESp6LBAubFWUFNU8t18ixtBIh05lkZVlbjAPJtAZdKwkyqyplZS4LnYEUHAVX4pQ8O-bufH-9xzAY14SpFegwNmi4kio7wudHaH0fgsfa7HzjwI-GMzPtwaAzhz1E-mTO3JcOq1s4Dz6CpzOAYKGt41BsE26diE1KlkeXHN1N0-L434Jm9fZv4dk3YcDv_zz4byYvRJGZy-25-fRh_epyuxFmLf4As1Ku1g</recordid><startdate>2002</startdate><enddate>2002</enddate><creator>Valentine, Carrie R.</creator><creator>Montgomery, Beverly A.</creator><creator>Miller, Scott G.</creator><creator>Delongchamp, Robert R.</creator><creator>Fane, Bentley A.</creator><creator>Malling, Heinrich V.</creator><general>John Wiley & Sons, Inc</general><general>Wiley-Liss</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7U7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>2002</creationdate><title>Characterization of mutant spectra generated by a forward mutational assay for gene A of ΦX174 from ENU-treated transgenic mouse embryonic cell line PX-2</title><author>Valentine, Carrie R. ; Montgomery, Beverly A. ; Miller, Scott G. ; Delongchamp, Robert R. ; Fane, Bentley A. ; Malling, Heinrich V.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4163-e7c57bdaf12c19e1ebc4ea59540bbfce109599a9f84a45dd8c464795a431e3183</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2002</creationdate><topic>Animals</topic><topic>Bacteriophage phi X 174 - genetics</topic><topic>Base Pair Mismatch</topic><topic>Biological and medical sciences</topic><topic>Cell Line</topic><topic>Cell Survival - drug effects</topic><topic>Cell Survival - genetics</topic><topic>Chemical mutagenesis</topic><topic>Dose-Response Relationship, Drug</topic><topic>Drug toxicity and drugs side effects treatment</topic><topic>ENU</topic><topic>Escherichia coli - genetics</topic><topic>Ethylnitrosourea - toxicity</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>gene A</topic><topic>Medical sciences</topic><topic>Mice</topic><topic>Mice, Transgenic</topic><topic>Miscellaneous (drug allergy, mutagens, teratogens...)</topic><topic>Molecular and cellular biology</topic><topic>Molecular genetics</topic><topic>mouse cell</topic><topic>Mutagenesis. Repair</topic><topic>Mutagenicity Tests - methods</topic><topic>Mutagens - toxicity</topic><topic>Mutation</topic><topic>Pharmacology. Drug treatments</topic><topic>phiX174</topic><topic>Toxicology</topic><topic>transgenic</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Valentine, Carrie R.</creatorcontrib><creatorcontrib>Montgomery, Beverly A.</creatorcontrib><creatorcontrib>Miller, Scott G.</creatorcontrib><creatorcontrib>Delongchamp, Robert R.</creatorcontrib><creatorcontrib>Fane, Bentley A.</creatorcontrib><creatorcontrib>Malling, Heinrich V.</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Toxicology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Environmental and molecular mutagenesis</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Valentine, Carrie R.</au><au>Montgomery, Beverly A.</au><au>Miller, Scott G.</au><au>Delongchamp, Robert R.</au><au>Fane, Bentley A.</au><au>Malling, Heinrich V.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of mutant spectra generated by a forward mutational assay for gene A of ΦX174 from ENU-treated transgenic mouse embryonic cell line PX-2</atitle><jtitle>Environmental and molecular mutagenesis</jtitle><addtitle>Environ. Mol. Mutagen</addtitle><date>2002</date><risdate>2002</risdate><volume>39</volume><issue>1</issue><spage>55</spage><epage>68</epage><pages>55-68</pages><issn>0893-6692</issn><eissn>1098-2280</eissn><coden>EMMUEG</coden><abstract>The sensitivity of in vivo transgenic mutation assays benefits from the sequencing of mutations, although the large number of possible mutations hinders high throughput sequencing. A forward mutational assay exists for ΦX174 that requires an altered, functional ΦX174 protein and therefore should have fewer targets (sense, base‐pair substitutions) than forward assays that inactivate a protein. We investigated this assay to determine the number of targets and their suitability for detecting a known mutagen, N‐ethyl‐N‐nitrosourea (ENU). We identified 25 target sites and 33 different mutations in ΦX174 gene A after sequencing over 350 spontaneous and ENU‐induced mutants, mostly from mouse embryonic cell line PX‐2 isolated from mice transgenic for ΦX174 am3, cs70 (line 54). All six types of base‐pair substitution were represented among both the spontaneous and ENU‐treated mutant spectra. The mutant spectra from cells treated with 200 and 400 μg/ml ENU were both highly different from the spontaneous spectrum (P < 0.000001) but not from each other. The dose trend was significant (P < 0.0001) for a linear regression of mutant frequencies (R2 = 0.79), with a ninefold increase in mutant frequency at the 400 μg/ml dose. The spontaneous mutant frequency was 1.9 × 10−5 and the spontaneous spectrum occurred at 11 target base pairs with 15 different mutations. Thirteen mutations at 12 targets were identified only from ENU‐treated cells. Seven mutations had highly significant increases with ENU treatment (P < 0.0001) and 15 showed significant increases. The results suggest that the ΦX174 forward assay might be developed into a sensitive, inexpensive in vivo mutagenicity assay. Environ. Mol. Mutagen. 39:55–68, 2002 Published 2002 Wiley‐Liss, Inc.</abstract><cop>New York</cop><pub>John Wiley & Sons, Inc</pub><pmid>11813297</pmid><doi>10.1002/em.10043</doi><tpages>14</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0893-6692 |
ispartof | Environmental and molecular mutagenesis, 2002, Vol.39 (1), p.55-68 |
issn | 0893-6692 1098-2280 |
language | eng |
recordid | cdi_proquest_miscellaneous_18485318 |
source | Wiley-Blackwell Read & Publish Collection |
subjects | Animals Bacteriophage phi X 174 - genetics Base Pair Mismatch Biological and medical sciences Cell Line Cell Survival - drug effects Cell Survival - genetics Chemical mutagenesis Dose-Response Relationship, Drug Drug toxicity and drugs side effects treatment ENU Escherichia coli - genetics Ethylnitrosourea - toxicity Fundamental and applied biological sciences. Psychology gene A Medical sciences Mice Mice, Transgenic Miscellaneous (drug allergy, mutagens, teratogens...) Molecular and cellular biology Molecular genetics mouse cell Mutagenesis. Repair Mutagenicity Tests - methods Mutagens - toxicity Mutation Pharmacology. Drug treatments phiX174 Toxicology transgenic |
title | Characterization of mutant spectra generated by a forward mutational assay for gene A of ΦX174 from ENU-treated transgenic mouse embryonic cell line PX-2 |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-20T19%3A32%3A22IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Characterization%20of%20mutant%20spectra%20generated%20by%20a%20forward%20mutational%20assay%20for%20gene%20A%20of%20%CE%A6X174%20from%20ENU-treated%20transgenic%20mouse%20embryonic%20cell%20line%20PX-2&rft.jtitle=Environmental%20and%20molecular%20mutagenesis&rft.au=Valentine,%20Carrie%20R.&rft.date=2002&rft.volume=39&rft.issue=1&rft.spage=55&rft.epage=68&rft.pages=55-68&rft.issn=0893-6692&rft.eissn=1098-2280&rft.coden=EMMUEG&rft_id=info:doi/10.1002/em.10043&rft_dat=%3Cproquest_cross%3E18485318%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c4163-e7c57bdaf12c19e1ebc4ea59540bbfce109599a9f84a45dd8c464795a431e3183%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=18485318&rft_id=info:pmid/11813297&rfr_iscdi=true |