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Altered molecular signature of intestinal microbiota in irritable bowel syndrome patients compared with healthy controls: A systematic review and meta-analysis

Abstract Background Many studies have reported significant changes in intestinal microbiota in irritable bowel syndrome (IBS) patients based on quantitative real-time PCR analysis. Aims We aimed to review the alterations in intestinal microbiota. Methods An online search up to June 9, 2016, was cond...

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Published in:Digestive and liver disease 2017-04, Vol.49 (4), p.331-337
Main Authors: Liu, Hai-Ning, Wu, Hao, Chen, Yu-Zhuo, Chen, Yan-Jie, Shen, Xi-Zhong, Liu, Tao-Tao
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container_title Digestive and liver disease
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creator Liu, Hai-Ning
Wu, Hao
Chen, Yu-Zhuo
Chen, Yan-Jie
Shen, Xi-Zhong
Liu, Tao-Tao
description Abstract Background Many studies have reported significant changes in intestinal microbiota in irritable bowel syndrome (IBS) patients based on quantitative real-time PCR analysis. Aims We aimed to review the alterations in intestinal microbiota. Methods An online search up to June 9, 2016, was conducted. This systematic review and meta-analysis included differential expression of intestinal microbiota in patients with IBS versus healthy controls (HCs) and subgroup analysis. We assessed the quality of the included studies using an original assessment tool. Results A total of 13 articles involving 360 IBS patients and 268 healthy controls were included. The quality assessment scores for these articles ranged from 5 to 8. Significant differences in expression in IBS patients were observed for Lactobacillus (SMD = −0.85, P < 0.001, I2 = 28%), Bifidobacterium (SMD = −1.17, P < 0.001, I2 = 79.3%), and Faecalibacterium prausnitzii (SMD = −1.05, P < 0.001, I2 = 0.0%) but not Bacteroides - Prevotella group, Escherichia coli or other genera or species. Subgroup analysis showed that diarrhea-predominant IBS patients had significantly different expression of Lactobacillus (SMD = −1.81, P < 0.001) and Bifidobacterium (SMD = −1.45, P < 0.001). Conclusion Down-regulation of bacterial colonization including Lactobacillus , Bifidobacterium and F. prausnitzii was observed in IBS patients, particularly in diarrhea-predominant IBS (IBS-D). Microbiota changes participate in the pathogenesis of IBS and may underlie the efficacy of probiotic supplements.
doi_str_mv 10.1016/j.dld.2017.01.142
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Aims We aimed to review the alterations in intestinal microbiota. Methods An online search up to June 9, 2016, was conducted. This systematic review and meta-analysis included differential expression of intestinal microbiota in patients with IBS versus healthy controls (HCs) and subgroup analysis. We assessed the quality of the included studies using an original assessment tool. Results A total of 13 articles involving 360 IBS patients and 268 healthy controls were included. The quality assessment scores for these articles ranged from 5 to 8. Significant differences in expression in IBS patients were observed for Lactobacillus (SMD = −0.85, P &lt; 0.001, I2 = 28%), Bifidobacterium (SMD = −1.17, P &lt; 0.001, I2 = 79.3%), and Faecalibacterium prausnitzii (SMD = −1.05, P &lt; 0.001, I2 = 0.0%) but not Bacteroides - Prevotella group, Escherichia coli or other genera or species. Subgroup analysis showed that diarrhea-predominant IBS patients had significantly different expression of Lactobacillus (SMD = −1.81, P &lt; 0.001) and Bifidobacterium (SMD = −1.45, P &lt; 0.001). Conclusion Down-regulation of bacterial colonization including Lactobacillus , Bifidobacterium and F. prausnitzii was observed in IBS patients, particularly in diarrhea-predominant IBS (IBS-D). Microbiota changes participate in the pathogenesis of IBS and may underlie the efficacy of probiotic supplements.</description><identifier>ISSN: 1590-8658</identifier><identifier>EISSN: 1878-3562</identifier><identifier>DOI: 10.1016/j.dld.2017.01.142</identifier><identifier>PMID: 28179092</identifier><language>eng</language><publisher>Netherlands: Elsevier Ltd</publisher><subject>Bacteria - classification ; Bacteria - isolation &amp; purification ; Diarrhea - microbiology ; DNA, Bacterial - analysis ; Down-Regulation ; Feces - microbiology ; Gastroenterology and Hepatology ; Gastrointestinal Microbiome - genetics ; Humans ; Intestinal microbiota ; Irritable bowel syndrome ; Irritable Bowel Syndrome - microbiology ; Meta-analysis ; Probiotics - therapeutic use ; Real-Time Polymerase Chain Reaction ; Systematic review</subject><ispartof>Digestive and liver disease, 2017-04, Vol.49 (4), p.331-337</ispartof><rights>Editrice Gastroenterologica Italiana S.r.l.</rights><rights>2017 Editrice Gastroenterologica Italiana S.r.l.</rights><rights>Copyright © 2017 Editrice Gastroenterologica Italiana S.r.l. Published by Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c408t-c2261f977d23d76eb25b995d0abfc93e79df2baaa7eaca63e4892a5952a211833</citedby><cites>FETCH-LOGICAL-c408t-c2261f977d23d76eb25b995d0abfc93e79df2baaa7eaca63e4892a5952a211833</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28179092$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Liu, Hai-Ning</creatorcontrib><creatorcontrib>Wu, Hao</creatorcontrib><creatorcontrib>Chen, Yu-Zhuo</creatorcontrib><creatorcontrib>Chen, Yan-Jie</creatorcontrib><creatorcontrib>Shen, Xi-Zhong</creatorcontrib><creatorcontrib>Liu, Tao-Tao</creatorcontrib><title>Altered molecular signature of intestinal microbiota in irritable bowel syndrome patients compared with healthy controls: A systematic review and meta-analysis</title><title>Digestive and liver disease</title><addtitle>Dig Liver Dis</addtitle><description>Abstract Background Many studies have reported significant changes in intestinal microbiota in irritable bowel syndrome (IBS) patients based on quantitative real-time PCR analysis. Aims We aimed to review the alterations in intestinal microbiota. Methods An online search up to June 9, 2016, was conducted. This systematic review and meta-analysis included differential expression of intestinal microbiota in patients with IBS versus healthy controls (HCs) and subgroup analysis. We assessed the quality of the included studies using an original assessment tool. Results A total of 13 articles involving 360 IBS patients and 268 healthy controls were included. The quality assessment scores for these articles ranged from 5 to 8. Significant differences in expression in IBS patients were observed for Lactobacillus (SMD = −0.85, P &lt; 0.001, I2 = 28%), Bifidobacterium (SMD = −1.17, P &lt; 0.001, I2 = 79.3%), and Faecalibacterium prausnitzii (SMD = −1.05, P &lt; 0.001, I2 = 0.0%) but not Bacteroides - Prevotella group, Escherichia coli or other genera or species. Subgroup analysis showed that diarrhea-predominant IBS patients had significantly different expression of Lactobacillus (SMD = −1.81, P &lt; 0.001) and Bifidobacterium (SMD = −1.45, P &lt; 0.001). Conclusion Down-regulation of bacterial colonization including Lactobacillus , Bifidobacterium and F. prausnitzii was observed in IBS patients, particularly in diarrhea-predominant IBS (IBS-D). Microbiota changes participate in the pathogenesis of IBS and may underlie the efficacy of probiotic supplements.</description><subject>Bacteria - classification</subject><subject>Bacteria - isolation &amp; purification</subject><subject>Diarrhea - microbiology</subject><subject>DNA, Bacterial - analysis</subject><subject>Down-Regulation</subject><subject>Feces - microbiology</subject><subject>Gastroenterology and Hepatology</subject><subject>Gastrointestinal Microbiome - genetics</subject><subject>Humans</subject><subject>Intestinal microbiota</subject><subject>Irritable bowel syndrome</subject><subject>Irritable Bowel Syndrome - microbiology</subject><subject>Meta-analysis</subject><subject>Probiotics - therapeutic use</subject><subject>Real-Time Polymerase Chain Reaction</subject><subject>Systematic review</subject><issn>1590-8658</issn><issn>1878-3562</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNp9UsuO1DAQjBCIfcAHcEE-ckmwncSJQUIarVhAWokDcLY6dofx4MSD7ewoX8Ov4mgWDhw42WpVlV1VXRQvGK0YZeL1oTLOVJyyrqKsYg1_VFyyvuvLuhX8cb63kpa9aPuL4irGA6WciZY-LS54zzpJJb8sfu1cwoCGTN6hXhwEEu33GdISkPiR2DlhTHYGRyargx-sT5CnxIZgEwwOyeBP6EhcZxP8hOQIyeKcItF-OsImfbJpT_YILu3XPJ1T8C6-IbvMiQmnjNck4L3FE4E5_wQTlJBfXKONz4onI7iIzx_O6-Lb7fuvNx_Lu88fPt3s7krd0D6VmnPBRtl1htemEzjwdpCyNRSGUcsaO2lGPgBAh6BB1Nj0kkMrWw6csb6ur4tXZ91j8D-XbFlNNmp0Dmb0S1SsF0LIuuFNhrIzNMcRY8BRHYOdIKyKUbX1og4q96K2XhRlKveSOS8f5JdhQvOX8aeIDHh7BmA2maMIKuoco0ZjA-qkjLf_lX_3D1s7O1sN7geuGA9-CTnP7EJFrqj6si3Gthesqylrsq_frse3dw</recordid><startdate>20170401</startdate><enddate>20170401</enddate><creator>Liu, Hai-Ning</creator><creator>Wu, Hao</creator><creator>Chen, Yu-Zhuo</creator><creator>Chen, Yan-Jie</creator><creator>Shen, Xi-Zhong</creator><creator>Liu, Tao-Tao</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20170401</creationdate><title>Altered molecular signature of intestinal microbiota in irritable bowel syndrome patients compared with healthy controls: A systematic review and meta-analysis</title><author>Liu, Hai-Ning ; Wu, Hao ; Chen, Yu-Zhuo ; Chen, Yan-Jie ; Shen, Xi-Zhong ; Liu, Tao-Tao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c408t-c2261f977d23d76eb25b995d0abfc93e79df2baaa7eaca63e4892a5952a211833</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Bacteria - classification</topic><topic>Bacteria - isolation &amp; purification</topic><topic>Diarrhea - microbiology</topic><topic>DNA, Bacterial - analysis</topic><topic>Down-Regulation</topic><topic>Feces - microbiology</topic><topic>Gastroenterology and Hepatology</topic><topic>Gastrointestinal Microbiome - genetics</topic><topic>Humans</topic><topic>Intestinal microbiota</topic><topic>Irritable bowel syndrome</topic><topic>Irritable Bowel Syndrome - microbiology</topic><topic>Meta-analysis</topic><topic>Probiotics - therapeutic use</topic><topic>Real-Time Polymerase Chain Reaction</topic><topic>Systematic review</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Liu, Hai-Ning</creatorcontrib><creatorcontrib>Wu, Hao</creatorcontrib><creatorcontrib>Chen, Yu-Zhuo</creatorcontrib><creatorcontrib>Chen, Yan-Jie</creatorcontrib><creatorcontrib>Shen, Xi-Zhong</creatorcontrib><creatorcontrib>Liu, Tao-Tao</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Digestive and liver disease</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Liu, Hai-Ning</au><au>Wu, Hao</au><au>Chen, Yu-Zhuo</au><au>Chen, Yan-Jie</au><au>Shen, Xi-Zhong</au><au>Liu, Tao-Tao</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Altered molecular signature of intestinal microbiota in irritable bowel syndrome patients compared with healthy controls: A systematic review and meta-analysis</atitle><jtitle>Digestive and liver disease</jtitle><addtitle>Dig Liver Dis</addtitle><date>2017-04-01</date><risdate>2017</risdate><volume>49</volume><issue>4</issue><spage>331</spage><epage>337</epage><pages>331-337</pages><issn>1590-8658</issn><eissn>1878-3562</eissn><abstract>Abstract Background Many studies have reported significant changes in intestinal microbiota in irritable bowel syndrome (IBS) patients based on quantitative real-time PCR analysis. Aims We aimed to review the alterations in intestinal microbiota. Methods An online search up to June 9, 2016, was conducted. This systematic review and meta-analysis included differential expression of intestinal microbiota in patients with IBS versus healthy controls (HCs) and subgroup analysis. We assessed the quality of the included studies using an original assessment tool. Results A total of 13 articles involving 360 IBS patients and 268 healthy controls were included. The quality assessment scores for these articles ranged from 5 to 8. Significant differences in expression in IBS patients were observed for Lactobacillus (SMD = −0.85, P &lt; 0.001, I2 = 28%), Bifidobacterium (SMD = −1.17, P &lt; 0.001, I2 = 79.3%), and Faecalibacterium prausnitzii (SMD = −1.05, P &lt; 0.001, I2 = 0.0%) but not Bacteroides - Prevotella group, Escherichia coli or other genera or species. Subgroup analysis showed that diarrhea-predominant IBS patients had significantly different expression of Lactobacillus (SMD = −1.81, P &lt; 0.001) and Bifidobacterium (SMD = −1.45, P &lt; 0.001). Conclusion Down-regulation of bacterial colonization including Lactobacillus , Bifidobacterium and F. prausnitzii was observed in IBS patients, particularly in diarrhea-predominant IBS (IBS-D). Microbiota changes participate in the pathogenesis of IBS and may underlie the efficacy of probiotic supplements.</abstract><cop>Netherlands</cop><pub>Elsevier Ltd</pub><pmid>28179092</pmid><doi>10.1016/j.dld.2017.01.142</doi><tpages>7</tpages></addata></record>
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subjects Bacteria - classification
Bacteria - isolation & purification
Diarrhea - microbiology
DNA, Bacterial - analysis
Down-Regulation
Feces - microbiology
Gastroenterology and Hepatology
Gastrointestinal Microbiome - genetics
Humans
Intestinal microbiota
Irritable bowel syndrome
Irritable Bowel Syndrome - microbiology
Meta-analysis
Probiotics - therapeutic use
Real-Time Polymerase Chain Reaction
Systematic review
title Altered molecular signature of intestinal microbiota in irritable bowel syndrome patients compared with healthy controls: A systematic review and meta-analysis
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