Full-genome sequencing and phylogenetic analysis of four neurovirulent Mexican isolates of porcine rubulavirus

We report the complete genome sequences of four neurovirulent isolates of porcine rubulavirus (PorPV) from 2015 and one historical PorPV isolate from 1984 obtained by next-generation sequencing. A phylogenetic tree constructed using the individual sequences of the complete HN genes of the 2015 isola...

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Bibliographic Details
Published in:Archives of virology 2017-06, Vol.162 (6), p.1765-1768
Main Authors: Garcia-Barrera, Ali A., Del Valle, Alberto, Montaño-Hirose, Juan A., Barrón, Blanca Lilia, Salinas-Trujano, Juana, Torres-Flores, Jesus
Format: Article
Language:English
Subjects:
Animals
Annotated Sequence Record
Base Sequence
Biomedical and Life Sciences
Biomedicine
Genome, Viral
Genomes
Infectious Diseases
Medical Microbiology
Mexico
Molecular Sequence Data
Neurovirulence
Phylogenetics
Phylogeny
RNA, Viral - genetics
Rubulavirus - classification
Rubulavirus - genetics
Rubulavirus - isolation & purification
Rubulavirus Infections - veterinary
Rubulavirus Infections - virology
Swine
Swine Diseases - virology
Virology
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Summary:We report the complete genome sequences of four neurovirulent isolates of porcine rubulavirus (PorPV) from 2015 and one historical PorPV isolate from 1984 obtained by next-generation sequencing. A phylogenetic tree constructed using the individual sequences of the complete HN genes of the 2015 isolates and other historical sequences deposited in the GenBank database revealed that several recent neurovirulent isolates of PorPV (2008-2015) cluster together in a separate clade. Phylogenetic analysis of the complete genome sequences revealed that the neurovirulent strains of PorPV that circulated in Mexico during 2015 are genetically different from the PorPV strains that circulated during the 1980s.
ISSN:0304-8608
1432-8798
DOI:10.1007/s00705-017-3267-7