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Application of gold nanoparticle-assisted PCR for equine herpesvirus 1 diagnosis in field samples
Equine herpesvirus 1 (EHV-1) is one of the most significant pathogens that affects equine species worldwide, causing sporadic abortion, neonatal deaths, chorioretinopathy, as well as neurological and upper respiratory tract diseases. Currently, conventional PCR targeting different genes is used wide...
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Published in: | Archives of virology 2017-08, Vol.162 (8), p.2297-2303 |
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description | Equine herpesvirus 1 (EHV-1) is one of the most significant pathogens that affects equine species worldwide, causing sporadic abortion, neonatal deaths, chorioretinopathy, as well as neurological and upper respiratory tract diseases. Currently, conventional PCR targeting different genes is used widely for the molecular detection of EHV-1, but the low viral titer in some clinical samples can lead to false negative results. In this study, we aimed to assess gold nanoparticle (GNP)-assisted PCR as an inexpensive, highly efficient, and sensitive method for the detection of EHV-1, and to compare its results with conventional PCR and real-time quantitative PCR (qPCR). Out of 83 field samples, 28.9%, 26.5%, and 15.6% were EHV-1-positive by qPCR, GNP-assisted PCR and conventional PCR, respectively. All three techniques specifically target the viral glycoprotein B gene. The optimized GNP-assisted PCR showed no cross-reactivity with EHV-1-negative samples (diagnosed by qPCR). GNP-assisted PCR is a powerful new tool for EHV-1 detection and surveillance, because of its simplicity, sensitivity and specificity. It can be used as an alternative to qPCR in laboratories that cannot afford the expense of a qPCR system. |
doi_str_mv | 10.1007/s00705-017-3379-0 |
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Currently, conventional PCR targeting different genes is used widely for the molecular detection of EHV-1, but the low viral titer in some clinical samples can lead to false negative results. In this study, we aimed to assess gold nanoparticle (GNP)-assisted PCR as an inexpensive, highly efficient, and sensitive method for the detection of EHV-1, and to compare its results with conventional PCR and real-time quantitative PCR (qPCR). Out of 83 field samples, 28.9%, 26.5%, and 15.6% were EHV-1-positive by qPCR, GNP-assisted PCR and conventional PCR, respectively. All three techniques specifically target the viral glycoprotein B gene. The optimized GNP-assisted PCR showed no cross-reactivity with EHV-1-negative samples (diagnosed by qPCR). GNP-assisted PCR is a powerful new tool for EHV-1 detection and surveillance, because of its simplicity, sensitivity and specificity. It can be used as an alternative to qPCR in laboratories that cannot afford the expense of a qPCR system.</description><identifier>ISSN: 0304-8608</identifier><identifier>EISSN: 1432-8798</identifier><identifier>DOI: 10.1007/s00705-017-3379-0</identifier><identifier>PMID: 28439710</identifier><language>eng</language><publisher>Vienna: Springer Vienna</publisher><subject>Abortion ; Animals ; Biomedical and Life Sciences ; Biomedicine ; Cross-reactivity ; Diagnosis ; DNA, Viral - isolation & purification ; Fish ; Glycoprotein B ; Gold ; Herpesviridae Infections - diagnosis ; Herpesviridae Infections - veterinary ; Herpesvirus 1, Equid - isolation & purification ; Horse Diseases - diagnosis ; Horse Diseases - virology ; Horses - virology ; Infectious Diseases ; Medical Microbiology ; Nanoparticles ; Neonates ; Original Article ; Polymerase chain reaction ; Real-Time Polymerase Chain Reaction - methods ; Real-Time Polymerase Chain Reaction - veterinary ; Respiratory tract diseases ; Sensitivity and Specificity ; Virology</subject><ispartof>Archives of virology, 2017-08, Vol.162 (8), p.2297-2303</ispartof><rights>Springer-Verlag Wien 2017</rights><rights>Archives of Virology is a copyright of Springer, 2017.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c372t-76a91c951913dc5f26d5a60be7c503ef391edb0f5d244e29552f19b4884d07003</citedby><cites>FETCH-LOGICAL-c372t-76a91c951913dc5f26d5a60be7c503ef391edb0f5d244e29552f19b4884d07003</cites><orcidid>0000-0001-9500-3690</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28439710$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>El-Husseini, Dalia M.</creatorcontrib><creatorcontrib>Helmy, Nashwa M.</creatorcontrib><creatorcontrib>Tammam, Reham H.</creatorcontrib><title>Application of gold nanoparticle-assisted PCR for equine herpesvirus 1 diagnosis in field samples</title><title>Archives of virology</title><addtitle>Arch Virol</addtitle><addtitle>Arch Virol</addtitle><description>Equine herpesvirus 1 (EHV-1) is one of the most significant pathogens that affects equine species worldwide, causing sporadic abortion, neonatal deaths, chorioretinopathy, as well as neurological and upper respiratory tract diseases. Currently, conventional PCR targeting different genes is used widely for the molecular detection of EHV-1, but the low viral titer in some clinical samples can lead to false negative results. In this study, we aimed to assess gold nanoparticle (GNP)-assisted PCR as an inexpensive, highly efficient, and sensitive method for the detection of EHV-1, and to compare its results with conventional PCR and real-time quantitative PCR (qPCR). Out of 83 field samples, 28.9%, 26.5%, and 15.6% were EHV-1-positive by qPCR, GNP-assisted PCR and conventional PCR, respectively. All three techniques specifically target the viral glycoprotein B gene. The optimized GNP-assisted PCR showed no cross-reactivity with EHV-1-negative samples (diagnosed by qPCR). GNP-assisted PCR is a powerful new tool for EHV-1 detection and surveillance, because of its simplicity, sensitivity and specificity. It can be used as an alternative to qPCR in laboratories that cannot afford the expense of a qPCR system.</description><subject>Abortion</subject><subject>Animals</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Cross-reactivity</subject><subject>Diagnosis</subject><subject>DNA, Viral - isolation & purification</subject><subject>Fish</subject><subject>Glycoprotein B</subject><subject>Gold</subject><subject>Herpesviridae Infections - diagnosis</subject><subject>Herpesviridae Infections - veterinary</subject><subject>Herpesvirus 1, Equid - isolation & purification</subject><subject>Horse Diseases - diagnosis</subject><subject>Horse Diseases - virology</subject><subject>Horses - virology</subject><subject>Infectious Diseases</subject><subject>Medical Microbiology</subject><subject>Nanoparticles</subject><subject>Neonates</subject><subject>Original Article</subject><subject>Polymerase chain reaction</subject><subject>Real-Time Polymerase Chain Reaction - methods</subject><subject>Real-Time Polymerase Chain Reaction - veterinary</subject><subject>Respiratory tract diseases</subject><subject>Sensitivity and Specificity</subject><subject>Virology</subject><issn>0304-8608</issn><issn>1432-8798</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNp1kN-LVCEUxyWKdnbrD-glhF56sY5XHfVxGfqxsFBEPYtzPU4ud_Su3hv03-cwW0QQyBHO-fg98iHkBYc3HEC_bb2AYsA1E0JbBo_IhksxMKOteUw2IEAyswVzQS5buwPoDaGekovBSGE1hw3x1_M8pdEvqWRaIj2UKdDsc5l9XdI4IfOtpbZgoJ93X2gsleL9mjLS71hnbD9SXRvlNCR_yKWTNGUaE_aU5o_zhO0ZeRL91PD5w31Fvr1_93X3kd1--nCzu75lo9DDwvTWWz5axS0XYVRx2Ablt7BHPSoQGIXlGPYQVRikxMEqNURu99IYGboFEFfk9Tl3ruV-xba4Y2ojTpPPWNbmuLH9aKVO6Kt_0Luy1tx_5_p6I4BLqTrFz9RYS2sVo5trOvr603FwJ__u7N91_-7k352SXz4kr_sjhj8vfgvvwHAGWh_lA9a_Vv839Rcl7o9M</recordid><startdate>20170801</startdate><enddate>20170801</enddate><creator>El-Husseini, Dalia M.</creator><creator>Helmy, Nashwa M.</creator><creator>Tammam, Reham H.</creator><general>Springer Vienna</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-9500-3690</orcidid></search><sort><creationdate>20170801</creationdate><title>Application of gold nanoparticle-assisted PCR for equine herpesvirus 1 diagnosis in field samples</title><author>El-Husseini, Dalia M. ; Helmy, Nashwa M. ; Tammam, Reham H.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c372t-76a91c951913dc5f26d5a60be7c503ef391edb0f5d244e29552f19b4884d07003</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Abortion</topic><topic>Animals</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Cross-reactivity</topic><topic>Diagnosis</topic><topic>DNA, Viral - isolation & purification</topic><topic>Fish</topic><topic>Glycoprotein B</topic><topic>Gold</topic><topic>Herpesviridae Infections - diagnosis</topic><topic>Herpesviridae Infections - veterinary</topic><topic>Herpesvirus 1, Equid - isolation & purification</topic><topic>Horse Diseases - diagnosis</topic><topic>Horse Diseases - virology</topic><topic>Horses - virology</topic><topic>Infectious Diseases</topic><topic>Medical Microbiology</topic><topic>Nanoparticles</topic><topic>Neonates</topic><topic>Original Article</topic><topic>Polymerase chain reaction</topic><topic>Real-Time Polymerase Chain Reaction - methods</topic><topic>Real-Time Polymerase Chain Reaction - veterinary</topic><topic>Respiratory tract diseases</topic><topic>Sensitivity and Specificity</topic><topic>Virology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>El-Husseini, Dalia M.</creatorcontrib><creatorcontrib>Helmy, Nashwa M.</creatorcontrib><creatorcontrib>Tammam, Reham H.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - 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Currently, conventional PCR targeting different genes is used widely for the molecular detection of EHV-1, but the low viral titer in some clinical samples can lead to false negative results. In this study, we aimed to assess gold nanoparticle (GNP)-assisted PCR as an inexpensive, highly efficient, and sensitive method for the detection of EHV-1, and to compare its results with conventional PCR and real-time quantitative PCR (qPCR). Out of 83 field samples, 28.9%, 26.5%, and 15.6% were EHV-1-positive by qPCR, GNP-assisted PCR and conventional PCR, respectively. All three techniques specifically target the viral glycoprotein B gene. The optimized GNP-assisted PCR showed no cross-reactivity with EHV-1-negative samples (diagnosed by qPCR). GNP-assisted PCR is a powerful new tool for EHV-1 detection and surveillance, because of its simplicity, sensitivity and specificity. 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subjects | Abortion Animals Biomedical and Life Sciences Biomedicine Cross-reactivity Diagnosis DNA, Viral - isolation & purification Fish Glycoprotein B Gold Herpesviridae Infections - diagnosis Herpesviridae Infections - veterinary Herpesvirus 1, Equid - isolation & purification Horse Diseases - diagnosis Horse Diseases - virology Horses - virology Infectious Diseases Medical Microbiology Nanoparticles Neonates Original Article Polymerase chain reaction Real-Time Polymerase Chain Reaction - methods Real-Time Polymerase Chain Reaction - veterinary Respiratory tract diseases Sensitivity and Specificity Virology |
title | Application of gold nanoparticle-assisted PCR for equine herpesvirus 1 diagnosis in field samples |
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