Loading…
A simple and robust method for the automatic scoring of EEG arousals in polysomnographic recordings
Abstract Background Clinical diagnosis of sleep disorders relies on the polysomnographic test to examine the neurophysiological markers of the sleep process. In this test, the recording of the electroencephalographic activity and the submental electromyogram is the source of the analysis for the det...
Saved in:
Published in: | Computers in biology and medicine 2017-08, Vol.87, p.77-86 |
---|---|
Main Authors: | , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c457t-68350328b10dd496202a53a01e26f9133ea8c5dc615b17ee7a958b393f86c6ae3 |
---|---|
cites | cdi_FETCH-LOGICAL-c457t-68350328b10dd496202a53a01e26f9133ea8c5dc615b17ee7a958b393f86c6ae3 |
container_end_page | 86 |
container_issue | |
container_start_page | 77 |
container_title | Computers in biology and medicine |
container_volume | 87 |
creator | Fernández-Varela, Isaac Alvarez-Estevez, Diego Hernández-Pereira, Elena Moret-Bonillo, Vicente |
description | Abstract Background Clinical diagnosis of sleep disorders relies on the polysomnographic test to examine the neurophysiological markers of the sleep process. In this test, the recording of the electroencephalographic activity and the submental electromyogram is the source of the analysis for the detection of electroencephalographic arousals. The identification of these events is important for the evaluation of the sleep continuity because they cause the fragmentation of the normal sleep process. This work proposes a new technique for the automatic detection of arousals in polysomnographic recordings, presenting a non-computationally complex method with the idea of providing an easy integration with other algorithms. Methods The proposed algorithm combines different well-known signal analysis solutions to identify relevant arousal patterns with special emphasis on robustness and artifacts tolerance. It is a multistage method that after obtaining an initial set of events, improves the detection finding common EEG arousal patterns. Finally, false positives are discarded after examining each candidate within the context of clinical definitions. Results 22 polysomnographic recordings from real patients were used to validate the method. The results obtained were encouraging, achieving a precision value of 0.86 and a F 1 score value of 0.79. When compared with the gold standard, the method achieves a substantial agreement (Kappa coefficient of 0.78), with an almost perfect agreement with ten recordings. Conclusions The algorithm designed achieved encouraging results and shows robust behavior in presence of signal artifacts. Its low-coupled design allows its implementation on different development platforms, and an easy combination with other methods. |
doi_str_mv | 10.1016/j.compbiomed.2017.05.011 |
format | article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1903943065</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>1_s2_0_S0010482517301336</els_id><sourcerecordid>1925900682</sourcerecordid><originalsourceid>FETCH-LOGICAL-c457t-68350328b10dd496202a53a01e26f9133ea8c5dc615b17ee7a958b393f86c6ae3</originalsourceid><addsrcrecordid>eNqNkk1v1DAQhi0EokvhLyBLXLgkjO3YcS5IpVoKUiUOwNlynEnXSxIHO6m0_x5H26pST5zmMM98ve8QQhmUDJj6dCxdGOfWhxG7kgOrS5AlMPaC7JiumwKkqF6SHQCDotJcXpA3KR0BoAIBr8kF11JWUOsdcVc0-XEekNqpozG0a1roiMshdLQPkS6HnFmXMNrFO5pciH66o6Gn-_0NtTGsyQ6J-onOYTilME7hLtr5kNmIGe4ynd6SV32m8N1DvCS_v-5_XX8rbn_cfL--ui1cJeulUFpIEFy3DLquahQHbqWwwJCrvmFCoNVOdk4x2bIasbaN1K1oRK-VUxbFJfl47jvH8HfFtJjRJ4fDYCfMixrWgGgqAUpm9MMz9BjWOOXtMsVlA6A0z5Q-Uy6GlCL2Zo5-tPFkGJjNCHM0T0aYzQgD0mQjcun7hwFru-UeCx-Vz8CXM4BZkXuP0STncXLY-azcYrrg_2fK52dN3OAn7-zwB0-Ynm4yiRswP7eH2P6B1QKyoEr8A5zpsu8</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1925900682</pqid></control><display><type>article</type><title>A simple and robust method for the automatic scoring of EEG arousals in polysomnographic recordings</title><source>Elsevier</source><creator>Fernández-Varela, Isaac ; Alvarez-Estevez, Diego ; Hernández-Pereira, Elena ; Moret-Bonillo, Vicente</creator><creatorcontrib>Fernández-Varela, Isaac ; Alvarez-Estevez, Diego ; Hernández-Pereira, Elena ; Moret-Bonillo, Vicente</creatorcontrib><description>Abstract Background Clinical diagnosis of sleep disorders relies on the polysomnographic test to examine the neurophysiological markers of the sleep process. In this test, the recording of the electroencephalographic activity and the submental electromyogram is the source of the analysis for the detection of electroencephalographic arousals. The identification of these events is important for the evaluation of the sleep continuity because they cause the fragmentation of the normal sleep process. This work proposes a new technique for the automatic detection of arousals in polysomnographic recordings, presenting a non-computationally complex method with the idea of providing an easy integration with other algorithms. Methods The proposed algorithm combines different well-known signal analysis solutions to identify relevant arousal patterns with special emphasis on robustness and artifacts tolerance. It is a multistage method that after obtaining an initial set of events, improves the detection finding common EEG arousal patterns. Finally, false positives are discarded after examining each candidate within the context of clinical definitions. Results 22 polysomnographic recordings from real patients were used to validate the method. The results obtained were encouraging, achieving a precision value of 0.86 and a F 1 score value of 0.79. When compared with the gold standard, the method achieves a substantial agreement (Kappa coefficient of 0.78), with an almost perfect agreement with ten recordings. Conclusions The algorithm designed achieved encouraging results and shows robust behavior in presence of signal artifacts. Its low-coupled design allows its implementation on different development platforms, and an easy combination with other methods.</description><identifier>ISSN: 0010-4825</identifier><identifier>EISSN: 1879-0534</identifier><identifier>DOI: 10.1016/j.compbiomed.2017.05.011</identifier><identifier>PMID: 28554078</identifier><language>eng</language><publisher>United States: Elsevier Ltd</publisher><subject>Algorithms ; Arousal ; Artificial intelligence ; Automation ; Data processing ; Disorders ; EEG ; EEG arousals ; Electroencephalography ; Electroencephalography - methods ; Electromyography ; Eye movements ; Humans ; Integration ; Internal Medicine ; Methods ; Muscle function ; Neural networks ; Other ; Polysomnography - methods ; PSG recordings ; Signal analysis ; Signal processing ; Sleep ; Sleep - physiology ; Sleep apnea ; Sleep disorders ; Sleep studies ; Sleep Wake Disorders - physiopathology ; Spectroscopy, Fourier Transform Infrared ; Wavelet transforms</subject><ispartof>Computers in biology and medicine, 2017-08, Vol.87, p.77-86</ispartof><rights>2017 Elsevier Ltd</rights><rights>Copyright © 2017 Elsevier Ltd. All rights reserved.</rights><rights>Copyright Elsevier Limited Aug 1, 2017</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c457t-68350328b10dd496202a53a01e26f9133ea8c5dc615b17ee7a958b393f86c6ae3</citedby><cites>FETCH-LOGICAL-c457t-68350328b10dd496202a53a01e26f9133ea8c5dc615b17ee7a958b393f86c6ae3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28554078$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Fernández-Varela, Isaac</creatorcontrib><creatorcontrib>Alvarez-Estevez, Diego</creatorcontrib><creatorcontrib>Hernández-Pereira, Elena</creatorcontrib><creatorcontrib>Moret-Bonillo, Vicente</creatorcontrib><title>A simple and robust method for the automatic scoring of EEG arousals in polysomnographic recordings</title><title>Computers in biology and medicine</title><addtitle>Comput Biol Med</addtitle><description>Abstract Background Clinical diagnosis of sleep disorders relies on the polysomnographic test to examine the neurophysiological markers of the sleep process. In this test, the recording of the electroencephalographic activity and the submental electromyogram is the source of the analysis for the detection of electroencephalographic arousals. The identification of these events is important for the evaluation of the sleep continuity because they cause the fragmentation of the normal sleep process. This work proposes a new technique for the automatic detection of arousals in polysomnographic recordings, presenting a non-computationally complex method with the idea of providing an easy integration with other algorithms. Methods The proposed algorithm combines different well-known signal analysis solutions to identify relevant arousal patterns with special emphasis on robustness and artifacts tolerance. It is a multistage method that after obtaining an initial set of events, improves the detection finding common EEG arousal patterns. Finally, false positives are discarded after examining each candidate within the context of clinical definitions. Results 22 polysomnographic recordings from real patients were used to validate the method. The results obtained were encouraging, achieving a precision value of 0.86 and a F 1 score value of 0.79. When compared with the gold standard, the method achieves a substantial agreement (Kappa coefficient of 0.78), with an almost perfect agreement with ten recordings. Conclusions The algorithm designed achieved encouraging results and shows robust behavior in presence of signal artifacts. Its low-coupled design allows its implementation on different development platforms, and an easy combination with other methods.</description><subject>Algorithms</subject><subject>Arousal</subject><subject>Artificial intelligence</subject><subject>Automation</subject><subject>Data processing</subject><subject>Disorders</subject><subject>EEG</subject><subject>EEG arousals</subject><subject>Electroencephalography</subject><subject>Electroencephalography - methods</subject><subject>Electromyography</subject><subject>Eye movements</subject><subject>Humans</subject><subject>Integration</subject><subject>Internal Medicine</subject><subject>Methods</subject><subject>Muscle function</subject><subject>Neural networks</subject><subject>Other</subject><subject>Polysomnography - methods</subject><subject>PSG recordings</subject><subject>Signal analysis</subject><subject>Signal processing</subject><subject>Sleep</subject><subject>Sleep - physiology</subject><subject>Sleep apnea</subject><subject>Sleep disorders</subject><subject>Sleep studies</subject><subject>Sleep Wake Disorders - physiopathology</subject><subject>Spectroscopy, Fourier Transform Infrared</subject><subject>Wavelet transforms</subject><issn>0010-4825</issn><issn>1879-0534</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNqNkk1v1DAQhi0EokvhLyBLXLgkjO3YcS5IpVoKUiUOwNlynEnXSxIHO6m0_x5H26pST5zmMM98ve8QQhmUDJj6dCxdGOfWhxG7kgOrS5AlMPaC7JiumwKkqF6SHQCDotJcXpA3KR0BoAIBr8kF11JWUOsdcVc0-XEekNqpozG0a1roiMshdLQPkS6HnFmXMNrFO5pciH66o6Gn-_0NtTGsyQ6J-onOYTilME7hLtr5kNmIGe4ynd6SV32m8N1DvCS_v-5_XX8rbn_cfL--ui1cJeulUFpIEFy3DLquahQHbqWwwJCrvmFCoNVOdk4x2bIasbaN1K1oRK-VUxbFJfl47jvH8HfFtJjRJ4fDYCfMixrWgGgqAUpm9MMz9BjWOOXtMsVlA6A0z5Q-Uy6GlCL2Zo5-tPFkGJjNCHM0T0aYzQgD0mQjcun7hwFru-UeCx-Vz8CXM4BZkXuP0STncXLY-azcYrrg_2fK52dN3OAn7-zwB0-Ynm4yiRswP7eH2P6B1QKyoEr8A5zpsu8</recordid><startdate>20170801</startdate><enddate>20170801</enddate><creator>Fernández-Varela, Isaac</creator><creator>Alvarez-Estevez, Diego</creator><creator>Hernández-Pereira, Elena</creator><creator>Moret-Bonillo, Vicente</creator><general>Elsevier Ltd</general><general>Elsevier Limited</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7RV</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AL</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>JQ2</scope><scope>K7-</scope><scope>K9.</scope><scope>KB0</scope><scope>LK8</scope><scope>M0N</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>M7Z</scope><scope>MBDVC</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope></search><sort><creationdate>20170801</creationdate><title>A simple and robust method for the automatic scoring of EEG arousals in polysomnographic recordings</title><author>Fernández-Varela, Isaac ; Alvarez-Estevez, Diego ; Hernández-Pereira, Elena ; Moret-Bonillo, Vicente</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c457t-68350328b10dd496202a53a01e26f9133ea8c5dc615b17ee7a958b393f86c6ae3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Algorithms</topic><topic>Arousal</topic><topic>Artificial intelligence</topic><topic>Automation</topic><topic>Data processing</topic><topic>Disorders</topic><topic>EEG</topic><topic>EEG arousals</topic><topic>Electroencephalography</topic><topic>Electroencephalography - methods</topic><topic>Electromyography</topic><topic>Eye movements</topic><topic>Humans</topic><topic>Integration</topic><topic>Internal Medicine</topic><topic>Methods</topic><topic>Muscle function</topic><topic>Neural networks</topic><topic>Other</topic><topic>Polysomnography - methods</topic><topic>PSG recordings</topic><topic>Signal analysis</topic><topic>Signal processing</topic><topic>Sleep</topic><topic>Sleep - physiology</topic><topic>Sleep apnea</topic><topic>Sleep disorders</topic><topic>Sleep studies</topic><topic>Sleep Wake Disorders - physiopathology</topic><topic>Spectroscopy, Fourier Transform Infrared</topic><topic>Wavelet transforms</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Fernández-Varela, Isaac</creatorcontrib><creatorcontrib>Alvarez-Estevez, Diego</creatorcontrib><creatorcontrib>Hernández-Pereira, Elena</creatorcontrib><creatorcontrib>Moret-Bonillo, Vicente</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Nursing & Allied Health Database</collection><collection>Health & Medical Collection (ProQuest Medical & Health Databases)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Computing Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>Advanced Technologies & Aerospace Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep (ProQuest)</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Computer Science Collection</collection><collection>Computer science database</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Database (Alumni Edition)</collection><collection>ProQuest Biological Science Collection</collection><collection>Computing Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>ProQuest research library</collection><collection>ProQuest Biological Science Journals</collection><collection>Biochemistry Abstracts 1</collection><collection>Research Library (Corporate)</collection><collection>Nursing & Allied Health Premium</collection><collection>ProQuest advanced technologies & aerospace journals</collection><collection>ProQuest Advanced Technologies & Aerospace Collection</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><jtitle>Computers in biology and medicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Fernández-Varela, Isaac</au><au>Alvarez-Estevez, Diego</au><au>Hernández-Pereira, Elena</au><au>Moret-Bonillo, Vicente</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A simple and robust method for the automatic scoring of EEG arousals in polysomnographic recordings</atitle><jtitle>Computers in biology and medicine</jtitle><addtitle>Comput Biol Med</addtitle><date>2017-08-01</date><risdate>2017</risdate><volume>87</volume><spage>77</spage><epage>86</epage><pages>77-86</pages><issn>0010-4825</issn><eissn>1879-0534</eissn><abstract>Abstract Background Clinical diagnosis of sleep disorders relies on the polysomnographic test to examine the neurophysiological markers of the sleep process. In this test, the recording of the electroencephalographic activity and the submental electromyogram is the source of the analysis for the detection of electroencephalographic arousals. The identification of these events is important for the evaluation of the sleep continuity because they cause the fragmentation of the normal sleep process. This work proposes a new technique for the automatic detection of arousals in polysomnographic recordings, presenting a non-computationally complex method with the idea of providing an easy integration with other algorithms. Methods The proposed algorithm combines different well-known signal analysis solutions to identify relevant arousal patterns with special emphasis on robustness and artifacts tolerance. It is a multistage method that after obtaining an initial set of events, improves the detection finding common EEG arousal patterns. Finally, false positives are discarded after examining each candidate within the context of clinical definitions. Results 22 polysomnographic recordings from real patients were used to validate the method. The results obtained were encouraging, achieving a precision value of 0.86 and a F 1 score value of 0.79. When compared with the gold standard, the method achieves a substantial agreement (Kappa coefficient of 0.78), with an almost perfect agreement with ten recordings. Conclusions The algorithm designed achieved encouraging results and shows robust behavior in presence of signal artifacts. Its low-coupled design allows its implementation on different development platforms, and an easy combination with other methods.</abstract><cop>United States</cop><pub>Elsevier Ltd</pub><pmid>28554078</pmid><doi>10.1016/j.compbiomed.2017.05.011</doi><tpages>10</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0010-4825 |
ispartof | Computers in biology and medicine, 2017-08, Vol.87, p.77-86 |
issn | 0010-4825 1879-0534 |
language | eng |
recordid | cdi_proquest_miscellaneous_1903943065 |
source | Elsevier |
subjects | Algorithms Arousal Artificial intelligence Automation Data processing Disorders EEG EEG arousals Electroencephalography Electroencephalography - methods Electromyography Eye movements Humans Integration Internal Medicine Methods Muscle function Neural networks Other Polysomnography - methods PSG recordings Signal analysis Signal processing Sleep Sleep - physiology Sleep apnea Sleep disorders Sleep studies Sleep Wake Disorders - physiopathology Spectroscopy, Fourier Transform Infrared Wavelet transforms |
title | A simple and robust method for the automatic scoring of EEG arousals in polysomnographic recordings |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-02T12%3A01%3A43IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=A%20simple%20and%20robust%20method%20for%20the%20automatic%20scoring%20of%20EEG%20arousals%20in%20polysomnographic%20recordings&rft.jtitle=Computers%20in%20biology%20and%20medicine&rft.au=Fern%C3%A1ndez-Varela,%20Isaac&rft.date=2017-08-01&rft.volume=87&rft.spage=77&rft.epage=86&rft.pages=77-86&rft.issn=0010-4825&rft.eissn=1879-0534&rft_id=info:doi/10.1016/j.compbiomed.2017.05.011&rft_dat=%3Cproquest_cross%3E1925900682%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c457t-68350328b10dd496202a53a01e26f9133ea8c5dc615b17ee7a958b393f86c6ae3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1925900682&rft_id=info:pmid/28554078&rfr_iscdi=true |