Loading…
The 113th and 117th charged amino acids in the 5th alpha-helix of the HBV core protein are necessary for pgRNA encapsidation
Although the structure-function of hepatitis B virus (HBV) core protein has been investigated by numerous HBV core mutants, functions of many regions in the core protein are still remained to be identified. In this report, it was found that point mutations in the 113th and 117th negative-charged ami...
Saved in:
Published in: | Virus genes 2003-12, Vol.27 (3), p.227-235 |
---|---|
Main Authors: | , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c311t-3f054e3acab5c35ab5df85da0764c102b159f1e5ede8fd116a8a965b560a6b663 |
---|---|
cites | |
container_end_page | 235 |
container_issue | 3 |
container_start_page | 227 |
container_title | Virus genes |
container_volume | 27 |
creator | Lee, Soo Min Park, Sung Gyoo Park, Esther Lee, Jae Yeon Jung, Guhung |
description | Although the structure-function of hepatitis B virus (HBV) core protein has been investigated by numerous HBV core mutants, functions of many regions in the core protein are still remained to be identified. In this report, it was found that point mutations in the 113th and 117th negative-charged amino acids in the 5th helix region of the HBV core strongly affect pregenomic RNA (pgRNA) encapsidation. These mutations were introduced by site-directed mutagenesis. The following results were obtained from analyses of the mutants. First, endogenous polymerase activity (EPA) was assayed and activity was not detected only in the two mutants, E113K and E117K. Second, the pgRNA encapsidation level of each mutant related to a change in charge of two amino acid sites was evaluated. Mutations in the 113th and 117th amino acids into uncharged amino acids reduced pgRNA encapsidation levels. Moreover, changes of the two amino acids into positive-charged amino acids almost completely reduced pgRNA encapsidation levels. To test whether the mutant core proteins assembled into normal capsid particles, the assembly of the mutant core proteins was seen. However, none of the changes in the 113th and 117th amino acids affected capsid formation. From this data, it can be inferred that the above two amino acids in the 5th alpha-helix in the HBV core protein are important for pgRNA encapsidation. |
doi_str_mv | 10.1023/A:1026339731001 |
format | article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_proquest_miscellaneous_19237340</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>19237340</sourcerecordid><originalsourceid>FETCH-LOGICAL-c311t-3f054e3acab5c35ab5df85da0764c102b159f1e5ede8fd116a8a965b560a6b663</originalsourceid><addsrcrecordid>eNpdkM1LxDAQxYMouq6evUnw4K2aSZq09bYufoEoiIq3Mk2mtku3rU0XFPzjjbpevMx7DD-G94axAxAnIKQ6nZ0FMUpliQIhYINNQCcyyrL4ZZNNRCZFlGqT7bBd7xdCiDSV8TbbgdhAKlI1YZ-PFXEANVYcWxdcEpytcHglx3FZtx1HWzvP65aPAdXfYNNXGFXU1O-8K3_W1-fP3HYD8X7oRgosBt-SJe9x-OBlN_D-9eFuxqm12Pva4Vh37R7bKrHxtL_WKXu6vHicX0e391c389ltZBXAGKlS6JgUWiy0VTpMV6baoUhMbEP_AnRWAmlylJYOwGCKmdGFNgJNYYyasuPfuyHd24r8mC9rb6lpsKVu5XPIpEpULAJ49A9cdKuhDdlyKZVJJMgkQIdraFUsyeX9UC9DyfzvqeoL4yN3Zg</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>223672127</pqid></control><display><type>article</type><title>The 113th and 117th charged amino acids in the 5th alpha-helix of the HBV core protein are necessary for pgRNA encapsidation</title><source>Springer Link</source><creator>Lee, Soo Min ; Park, Sung Gyoo ; Park, Esther ; Lee, Jae Yeon ; Jung, Guhung</creator><creatorcontrib>Lee, Soo Min ; Park, Sung Gyoo ; Park, Esther ; Lee, Jae Yeon ; Jung, Guhung</creatorcontrib><description>Although the structure-function of hepatitis B virus (HBV) core protein has been investigated by numerous HBV core mutants, functions of many regions in the core protein are still remained to be identified. In this report, it was found that point mutations in the 113th and 117th negative-charged amino acids in the 5th helix region of the HBV core strongly affect pregenomic RNA (pgRNA) encapsidation. These mutations were introduced by site-directed mutagenesis. The following results were obtained from analyses of the mutants. First, endogenous polymerase activity (EPA) was assayed and activity was not detected only in the two mutants, E113K and E117K. Second, the pgRNA encapsidation level of each mutant related to a change in charge of two amino acid sites was evaluated. Mutations in the 113th and 117th amino acids into uncharged amino acids reduced pgRNA encapsidation levels. Moreover, changes of the two amino acids into positive-charged amino acids almost completely reduced pgRNA encapsidation levels. To test whether the mutant core proteins assembled into normal capsid particles, the assembly of the mutant core proteins was seen. However, none of the changes in the 113th and 117th amino acids affected capsid formation. From this data, it can be inferred that the above two amino acids in the 5th alpha-helix in the HBV core protein are important for pgRNA encapsidation.</description><identifier>ISSN: 0920-8569</identifier><identifier>EISSN: 1572-994X</identifier><identifier>DOI: 10.1023/A:1026339731001</identifier><identifier>PMID: 14618083</identifier><language>eng</language><publisher>United States: Springer Nature B.V</publisher><subject>Amino Acid Sequence ; Amino Acids - chemistry ; Cell Line ; Hepatitis B virus ; Hepatitis B virus - genetics ; Hepatitis B virus - physiology ; Humans ; Models, Molecular ; Molecular Sequence Data ; Mutagenesis, Site-Directed ; Protein Structure, Secondary ; RNA, Viral - genetics ; RNA, Viral - metabolism ; Viral Core Proteins - chemistry ; Viral Core Proteins - genetics ; Viral Core Proteins - physiology ; Virus Assembly</subject><ispartof>Virus genes, 2003-12, Vol.27 (3), p.227-235</ispartof><rights>Copyright Kluwer Academic Publishers Dec 2003</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c311t-3f054e3acab5c35ab5df85da0764c102b159f1e5ede8fd116a8a965b560a6b663</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/14618083$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, Soo Min</creatorcontrib><creatorcontrib>Park, Sung Gyoo</creatorcontrib><creatorcontrib>Park, Esther</creatorcontrib><creatorcontrib>Lee, Jae Yeon</creatorcontrib><creatorcontrib>Jung, Guhung</creatorcontrib><title>The 113th and 117th charged amino acids in the 5th alpha-helix of the HBV core protein are necessary for pgRNA encapsidation</title><title>Virus genes</title><addtitle>Virus Genes</addtitle><description>Although the structure-function of hepatitis B virus (HBV) core protein has been investigated by numerous HBV core mutants, functions of many regions in the core protein are still remained to be identified. In this report, it was found that point mutations in the 113th and 117th negative-charged amino acids in the 5th helix region of the HBV core strongly affect pregenomic RNA (pgRNA) encapsidation. These mutations were introduced by site-directed mutagenesis. The following results were obtained from analyses of the mutants. First, endogenous polymerase activity (EPA) was assayed and activity was not detected only in the two mutants, E113K and E117K. Second, the pgRNA encapsidation level of each mutant related to a change in charge of two amino acid sites was evaluated. Mutations in the 113th and 117th amino acids into uncharged amino acids reduced pgRNA encapsidation levels. Moreover, changes of the two amino acids into positive-charged amino acids almost completely reduced pgRNA encapsidation levels. To test whether the mutant core proteins assembled into normal capsid particles, the assembly of the mutant core proteins was seen. However, none of the changes in the 113th and 117th amino acids affected capsid formation. From this data, it can be inferred that the above two amino acids in the 5th alpha-helix in the HBV core protein are important for pgRNA encapsidation.</description><subject>Amino Acid Sequence</subject><subject>Amino Acids - chemistry</subject><subject>Cell Line</subject><subject>Hepatitis B virus</subject><subject>Hepatitis B virus - genetics</subject><subject>Hepatitis B virus - physiology</subject><subject>Humans</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>Mutagenesis, Site-Directed</subject><subject>Protein Structure, Secondary</subject><subject>RNA, Viral - genetics</subject><subject>RNA, Viral - metabolism</subject><subject>Viral Core Proteins - chemistry</subject><subject>Viral Core Proteins - genetics</subject><subject>Viral Core Proteins - physiology</subject><subject>Virus Assembly</subject><issn>0920-8569</issn><issn>1572-994X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><recordid>eNpdkM1LxDAQxYMouq6evUnw4K2aSZq09bYufoEoiIq3Mk2mtku3rU0XFPzjjbpevMx7DD-G94axAxAnIKQ6nZ0FMUpliQIhYINNQCcyyrL4ZZNNRCZFlGqT7bBd7xdCiDSV8TbbgdhAKlI1YZ-PFXEANVYcWxdcEpytcHglx3FZtx1HWzvP65aPAdXfYNNXGFXU1O-8K3_W1-fP3HYD8X7oRgosBt-SJe9x-OBlN_D-9eFuxqm12Pva4Vh37R7bKrHxtL_WKXu6vHicX0e391c389ltZBXAGKlS6JgUWiy0VTpMV6baoUhMbEP_AnRWAmlylJYOwGCKmdGFNgJNYYyasuPfuyHd24r8mC9rb6lpsKVu5XPIpEpULAJ49A9cdKuhDdlyKZVJJMgkQIdraFUsyeX9UC9DyfzvqeoL4yN3Zg</recordid><startdate>20031201</startdate><enddate>20031201</enddate><creator>Lee, Soo Min</creator><creator>Park, Sung Gyoo</creator><creator>Park, Esther</creator><creator>Lee, Jae Yeon</creator><creator>Jung, Guhung</creator><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>3V.</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope></search><sort><creationdate>20031201</creationdate><title>The 113th and 117th charged amino acids in the 5th alpha-helix of the HBV core protein are necessary for pgRNA encapsidation</title><author>Lee, Soo Min ; Park, Sung Gyoo ; Park, Esther ; Lee, Jae Yeon ; Jung, Guhung</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c311t-3f054e3acab5c35ab5df85da0764c102b159f1e5ede8fd116a8a965b560a6b663</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Amino Acid Sequence</topic><topic>Amino Acids - chemistry</topic><topic>Cell Line</topic><topic>Hepatitis B virus</topic><topic>Hepatitis B virus - genetics</topic><topic>Hepatitis B virus - physiology</topic><topic>Humans</topic><topic>Models, Molecular</topic><topic>Molecular Sequence Data</topic><topic>Mutagenesis, Site-Directed</topic><topic>Protein Structure, Secondary</topic><topic>RNA, Viral - genetics</topic><topic>RNA, Viral - metabolism</topic><topic>Viral Core Proteins - chemistry</topic><topic>Viral Core Proteins - genetics</topic><topic>Viral Core Proteins - physiology</topic><topic>Virus Assembly</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Soo Min</creatorcontrib><creatorcontrib>Park, Sung Gyoo</creatorcontrib><creatorcontrib>Park, Esther</creatorcontrib><creatorcontrib>Lee, Jae Yeon</creatorcontrib><creatorcontrib>Jung, Guhung</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>ProQuest Central (Corporate)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><jtitle>Virus genes</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Soo Min</au><au>Park, Sung Gyoo</au><au>Park, Esther</au><au>Lee, Jae Yeon</au><au>Jung, Guhung</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The 113th and 117th charged amino acids in the 5th alpha-helix of the HBV core protein are necessary for pgRNA encapsidation</atitle><jtitle>Virus genes</jtitle><addtitle>Virus Genes</addtitle><date>2003-12-01</date><risdate>2003</risdate><volume>27</volume><issue>3</issue><spage>227</spage><epage>235</epage><pages>227-235</pages><issn>0920-8569</issn><eissn>1572-994X</eissn><abstract>Although the structure-function of hepatitis B virus (HBV) core protein has been investigated by numerous HBV core mutants, functions of many regions in the core protein are still remained to be identified. In this report, it was found that point mutations in the 113th and 117th negative-charged amino acids in the 5th helix region of the HBV core strongly affect pregenomic RNA (pgRNA) encapsidation. These mutations were introduced by site-directed mutagenesis. The following results were obtained from analyses of the mutants. First, endogenous polymerase activity (EPA) was assayed and activity was not detected only in the two mutants, E113K and E117K. Second, the pgRNA encapsidation level of each mutant related to a change in charge of two amino acid sites was evaluated. Mutations in the 113th and 117th amino acids into uncharged amino acids reduced pgRNA encapsidation levels. Moreover, changes of the two amino acids into positive-charged amino acids almost completely reduced pgRNA encapsidation levels. To test whether the mutant core proteins assembled into normal capsid particles, the assembly of the mutant core proteins was seen. However, none of the changes in the 113th and 117th amino acids affected capsid formation. From this data, it can be inferred that the above two amino acids in the 5th alpha-helix in the HBV core protein are important for pgRNA encapsidation.</abstract><cop>United States</cop><pub>Springer Nature B.V</pub><pmid>14618083</pmid><doi>10.1023/A:1026339731001</doi><tpages>9</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0920-8569 |
ispartof | Virus genes, 2003-12, Vol.27 (3), p.227-235 |
issn | 0920-8569 1572-994X |
language | eng |
recordid | cdi_proquest_miscellaneous_19237340 |
source | Springer Link |
subjects | Amino Acid Sequence Amino Acids - chemistry Cell Line Hepatitis B virus Hepatitis B virus - genetics Hepatitis B virus - physiology Humans Models, Molecular Molecular Sequence Data Mutagenesis, Site-Directed Protein Structure, Secondary RNA, Viral - genetics RNA, Viral - metabolism Viral Core Proteins - chemistry Viral Core Proteins - genetics Viral Core Proteins - physiology Virus Assembly |
title | The 113th and 117th charged amino acids in the 5th alpha-helix of the HBV core protein are necessary for pgRNA encapsidation |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-05T15%3A56%3A12IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=The%20113th%20and%20117th%20charged%20amino%20acids%20in%20the%205th%20alpha-helix%20of%20the%20HBV%20core%20protein%20are%20necessary%20for%20pgRNA%20encapsidation&rft.jtitle=Virus%20genes&rft.au=Lee,%20Soo%20Min&rft.date=2003-12-01&rft.volume=27&rft.issue=3&rft.spage=227&rft.epage=235&rft.pages=227-235&rft.issn=0920-8569&rft.eissn=1572-994X&rft_id=info:doi/10.1023/A:1026339731001&rft_dat=%3Cproquest_pubme%3E19237340%3C/proquest_pubme%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c311t-3f054e3acab5c35ab5df85da0764c102b159f1e5ede8fd116a8a965b560a6b663%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=223672127&rft_id=info:pmid/14618083&rfr_iscdi=true |