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RHD genotype and zygosity analysis in the Chinese Southern Han D+, D− and D variant donors using the multiplex ligation‐dependent probe amplification assay

Background and Objectives Several comprehensive genotyping platforms for determining red blood cell (RBC) antigens have been established and validated for use in the Caucasian and Black populations, but not for the Chinese. The multiplex ligation‐dependent probe amplification (MLPA) assay was valida...

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Published in:Vox sanguinis 2017-10, Vol.112 (7), p.660-670
Main Authors: Ji, Y. L., Luo, H., Wen, J. Z., Haer‐Wigman, L., Veldhuisen, B., Wei, L., Wang, Z., Ligthart, P., Lodén‐van Straaten, M., Fu, Y. S., Schoot, C. E., Luo, G. P.
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cited_by cdi_FETCH-LOGICAL-c2684-3c770cdc78cea18de59a7eb53d09ca65658c3e6c6612385fc9ab1be828dd94f03
cites cdi_FETCH-LOGICAL-c2684-3c770cdc78cea18de59a7eb53d09ca65658c3e6c6612385fc9ab1be828dd94f03
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container_issue 7
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container_title Vox sanguinis
container_volume 112
creator Ji, Y. L.
Luo, H.
Wen, J. Z.
Haer‐Wigman, L.
Veldhuisen, B.
Wei, L.
Wang, Z.
Ligthart, P.
Lodén‐van Straaten, M.
Fu, Y. S.
Schoot, C. E.
Luo, G. P.
description Background and Objectives Several comprehensive genotyping platforms for determining red blood cell (RBC) antigens have been established and validated for use in the Caucasian and Black populations, but not for the Chinese. The multiplex ligation‐dependent probe amplification (MLPA) assay was validated for RHD genotyping in the Chinese. Materials and Methods The blood samples of 200 D+, 200 D− and 62 D variant Chinese donors were collected. RhD antigen was routinely typed by serological method. D variant phenotype was determined by an anti‐D panel (D‐Screen), when RBCs were available. The RHD genotype and its zygosity were analysed with the RH‐MLPA technique. When the MLPA was unable to identify a RHD variant, direct sequencing of all exons of the RHD gene was performed. Results In 200 D+ donors, DD (168/200, 84%), D (12/200, 6%), DDD genotype (1/200) and D variant allele carriers (19/200, 9·5%) were found. In 200 D− donors, six reported RHD alleles, RHD*01EL.01, RHD*01N.03, RHD*01N.05, RHD*01N.16, RHD*DFR2 and RHD*weak partial 15 and one novel RHD*1154T allele were identified in 36·5% (73/200) of them. In 62 D variant donors, three novel RHD alleles, RHD*79_81delCTC, RHD*710T and RHD*689A, and twelve reported alleles, RHD*DVI.3, RHD*weak partial 15, RHD*DVI.4, RHD*01EL.01, RHD*01N.03, RHD*DLO, RHD*DV.5, RHD*D‐CE(2‐10), RHD*730C, RHD*weak D type 25, 33 and 72, were identified, either alone or in combination. Conclusion The RH‐MLPA assay correctly identified the common RHD variant alleles in the Chinese population. However, DNA sequencing was required to identify certain alleles; probes to detect these alleles should be added into the assay.
doi_str_mv 10.1111/vox.12554
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L. ; Luo, H. ; Wen, J. Z. ; Haer‐Wigman, L. ; Veldhuisen, B. ; Wei, L. ; Wang, Z. ; Ligthart, P. ; Lodén‐van Straaten, M. ; Fu, Y. S. ; Schoot, C. E. ; Luo, G. P.</creator><creatorcontrib>Ji, Y. L. ; Luo, H. ; Wen, J. Z. ; Haer‐Wigman, L. ; Veldhuisen, B. ; Wei, L. ; Wang, Z. ; Ligthart, P. ; Lodén‐van Straaten, M. ; Fu, Y. S. ; Schoot, C. E. ; Luo, G. P.</creatorcontrib><description>Background and Objectives Several comprehensive genotyping platforms for determining red blood cell (RBC) antigens have been established and validated for use in the Caucasian and Black populations, but not for the Chinese. The multiplex ligation‐dependent probe amplification (MLPA) assay was validated for RHD genotyping in the Chinese. Materials and Methods The blood samples of 200 D+, 200 D− and 62 D variant Chinese donors were collected. RhD antigen was routinely typed by serological method. D variant phenotype was determined by an anti‐D panel (D‐Screen), when RBCs were available. The RHD genotype and its zygosity were analysed with the RH‐MLPA technique. When the MLPA was unable to identify a RHD variant, direct sequencing of all exons of the RHD gene was performed. Results In 200 D+ donors, DD (168/200, 84%), D (12/200, 6%), DDD genotype (1/200) and D variant allele carriers (19/200, 9·5%) were found. In 200 D− donors, six reported RHD alleles, RHD*01EL.01, RHD*01N.03, RHD*01N.05, RHD*01N.16, RHD*DFR2 and RHD*weak partial 15 and one novel RHD*1154T allele were identified in 36·5% (73/200) of them. In 62 D variant donors, three novel RHD alleles, RHD*79_81delCTC, RHD*710T and RHD*689A, and twelve reported alleles, RHD*DVI.3, RHD*weak partial 15, RHD*DVI.4, RHD*01EL.01, RHD*01N.03, RHD*DLO, RHD*DV.5, RHD*D‐CE(2‐10), RHD*730C, RHD*weak D type 25, 33 and 72, were identified, either alone or in combination. Conclusion The RH‐MLPA assay correctly identified the common RHD variant alleles in the Chinese population. However, DNA sequencing was required to identify certain alleles; probes to detect these alleles should be added into the assay.</description><identifier>ISSN: 0042-9007</identifier><identifier>EISSN: 1423-0410</identifier><identifier>DOI: 10.1111/vox.12554</identifier><identifier>PMID: 28833187</identifier><language>eng</language><publisher>England: S. Karger AG</publisher><subject>Alleles ; Amplification ; Antigens ; Asian Continental Ancestry Group - genetics ; Assaying ; Bioassays ; Blood &amp; organ donations ; Blood cells ; Blood Donors ; Deoxyribonucleic acid ; DNA ; DNA probes ; DNA sequencing ; Erythrocytes ; Exons ; Genotype ; Genotype &amp; phenotype ; Genotyping ; Humans ; Molecular Diagnostic Techniques - methods ; Molecular Diagnostic Techniques - standards ; multiplex ligation‐dependent probe amplification ; Multiplex Polymerase Chain Reaction - methods ; Multiplex Polymerase Chain Reaction - standards ; Multiplexing ; Phenotype ; Population genetics ; Rh-Hr Blood-Group System - genetics ; RHD variant alleles ; Sampling methods ; the Chinese population ; Zygosity</subject><ispartof>Vox sanguinis, 2017-10, Vol.112 (7), p.660-670</ispartof><rights>2017 International Society of Blood Transfusion</rights><rights>2017 International Society of Blood Transfusion.</rights><rights>Copyright © 2017 International Society of Blood Transfusion</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2684-3c770cdc78cea18de59a7eb53d09ca65658c3e6c6612385fc9ab1be828dd94f03</citedby><cites>FETCH-LOGICAL-c2684-3c770cdc78cea18de59a7eb53d09ca65658c3e6c6612385fc9ab1be828dd94f03</cites><orcidid>0000-0001-6792-5612</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28833187$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ji, Y. L.</creatorcontrib><creatorcontrib>Luo, H.</creatorcontrib><creatorcontrib>Wen, J. Z.</creatorcontrib><creatorcontrib>Haer‐Wigman, L.</creatorcontrib><creatorcontrib>Veldhuisen, B.</creatorcontrib><creatorcontrib>Wei, L.</creatorcontrib><creatorcontrib>Wang, Z.</creatorcontrib><creatorcontrib>Ligthart, P.</creatorcontrib><creatorcontrib>Lodén‐van Straaten, M.</creatorcontrib><creatorcontrib>Fu, Y. S.</creatorcontrib><creatorcontrib>Schoot, C. E.</creatorcontrib><creatorcontrib>Luo, G. P.</creatorcontrib><title>RHD genotype and zygosity analysis in the Chinese Southern Han D+, D− and D variant donors using the multiplex ligation‐dependent probe amplification assay</title><title>Vox sanguinis</title><addtitle>Vox Sang</addtitle><description>Background and Objectives Several comprehensive genotyping platforms for determining red blood cell (RBC) antigens have been established and validated for use in the Caucasian and Black populations, but not for the Chinese. The multiplex ligation‐dependent probe amplification (MLPA) assay was validated for RHD genotyping in the Chinese. Materials and Methods The blood samples of 200 D+, 200 D− and 62 D variant Chinese donors were collected. RhD antigen was routinely typed by serological method. D variant phenotype was determined by an anti‐D panel (D‐Screen), when RBCs were available. The RHD genotype and its zygosity were analysed with the RH‐MLPA technique. When the MLPA was unable to identify a RHD variant, direct sequencing of all exons of the RHD gene was performed. Results In 200 D+ donors, DD (168/200, 84%), D (12/200, 6%), DDD genotype (1/200) and D variant allele carriers (19/200, 9·5%) were found. In 200 D− donors, six reported RHD alleles, RHD*01EL.01, RHD*01N.03, RHD*01N.05, RHD*01N.16, RHD*DFR2 and RHD*weak partial 15 and one novel RHD*1154T allele were identified in 36·5% (73/200) of them. In 62 D variant donors, three novel RHD alleles, RHD*79_81delCTC, RHD*710T and RHD*689A, and twelve reported alleles, RHD*DVI.3, RHD*weak partial 15, RHD*DVI.4, RHD*01EL.01, RHD*01N.03, RHD*DLO, RHD*DV.5, RHD*D‐CE(2‐10), RHD*730C, RHD*weak D type 25, 33 and 72, were identified, either alone or in combination. Conclusion The RH‐MLPA assay correctly identified the common RHD variant alleles in the Chinese population. 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L.</creator><creator>Luo, H.</creator><creator>Wen, J. Z.</creator><creator>Haer‐Wigman, L.</creator><creator>Veldhuisen, B.</creator><creator>Wei, L.</creator><creator>Wang, Z.</creator><creator>Ligthart, P.</creator><creator>Lodén‐van Straaten, M.</creator><creator>Fu, Y. S.</creator><creator>Schoot, C. E.</creator><creator>Luo, G. P.</creator><general>S. Karger AG</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T5</scope><scope>7TM</scope><scope>7U9</scope><scope>C1K</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-6792-5612</orcidid></search><sort><creationdate>201710</creationdate><title>RHD genotype and zygosity analysis in the Chinese Southern Han D+, D− and D variant donors using the multiplex ligation‐dependent probe amplification assay</title><author>Ji, Y. 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L.</creatorcontrib><creatorcontrib>Luo, H.</creatorcontrib><creatorcontrib>Wen, J. Z.</creatorcontrib><creatorcontrib>Haer‐Wigman, L.</creatorcontrib><creatorcontrib>Veldhuisen, B.</creatorcontrib><creatorcontrib>Wei, L.</creatorcontrib><creatorcontrib>Wang, Z.</creatorcontrib><creatorcontrib>Ligthart, P.</creatorcontrib><creatorcontrib>Lodén‐van Straaten, M.</creatorcontrib><creatorcontrib>Fu, Y. S.</creatorcontrib><creatorcontrib>Schoot, C. E.</creatorcontrib><creatorcontrib>Luo, G. P.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Immunology Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>MEDLINE - Academic</collection><jtitle>Vox sanguinis</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ji, Y. L.</au><au>Luo, H.</au><au>Wen, J. Z.</au><au>Haer‐Wigman, L.</au><au>Veldhuisen, B.</au><au>Wei, L.</au><au>Wang, Z.</au><au>Ligthart, P.</au><au>Lodén‐van Straaten, M.</au><au>Fu, Y. S.</au><au>Schoot, C. E.</au><au>Luo, G. P.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>RHD genotype and zygosity analysis in the Chinese Southern Han D+, D− and D variant donors using the multiplex ligation‐dependent probe amplification assay</atitle><jtitle>Vox sanguinis</jtitle><addtitle>Vox Sang</addtitle><date>2017-10</date><risdate>2017</risdate><volume>112</volume><issue>7</issue><spage>660</spage><epage>670</epage><pages>660-670</pages><issn>0042-9007</issn><eissn>1423-0410</eissn><abstract>Background and Objectives Several comprehensive genotyping platforms for determining red blood cell (RBC) antigens have been established and validated for use in the Caucasian and Black populations, but not for the Chinese. The multiplex ligation‐dependent probe amplification (MLPA) assay was validated for RHD genotyping in the Chinese. Materials and Methods The blood samples of 200 D+, 200 D− and 62 D variant Chinese donors were collected. RhD antigen was routinely typed by serological method. D variant phenotype was determined by an anti‐D panel (D‐Screen), when RBCs were available. The RHD genotype and its zygosity were analysed with the RH‐MLPA technique. When the MLPA was unable to identify a RHD variant, direct sequencing of all exons of the RHD gene was performed. Results In 200 D+ donors, DD (168/200, 84%), D (12/200, 6%), DDD genotype (1/200) and D variant allele carriers (19/200, 9·5%) were found. In 200 D− donors, six reported RHD alleles, RHD*01EL.01, RHD*01N.03, RHD*01N.05, RHD*01N.16, RHD*DFR2 and RHD*weak partial 15 and one novel RHD*1154T allele were identified in 36·5% (73/200) of them. In 62 D variant donors, three novel RHD alleles, RHD*79_81delCTC, RHD*710T and RHD*689A, and twelve reported alleles, RHD*DVI.3, RHD*weak partial 15, RHD*DVI.4, RHD*01EL.01, RHD*01N.03, RHD*DLO, RHD*DV.5, RHD*D‐CE(2‐10), RHD*730C, RHD*weak D type 25, 33 and 72, were identified, either alone or in combination. Conclusion The RH‐MLPA assay correctly identified the common RHD variant alleles in the Chinese population. However, DNA sequencing was required to identify certain alleles; probes to detect these alleles should be added into the assay.</abstract><cop>England</cop><pub>S. Karger AG</pub><pmid>28833187</pmid><doi>10.1111/vox.12554</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0001-6792-5612</orcidid></addata></record>
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subjects Alleles
Amplification
Antigens
Asian Continental Ancestry Group - genetics
Assaying
Bioassays
Blood & organ donations
Blood cells
Blood Donors
Deoxyribonucleic acid
DNA
DNA probes
DNA sequencing
Erythrocytes
Exons
Genotype
Genotype & phenotype
Genotyping
Humans
Molecular Diagnostic Techniques - methods
Molecular Diagnostic Techniques - standards
multiplex ligation‐dependent probe amplification
Multiplex Polymerase Chain Reaction - methods
Multiplex Polymerase Chain Reaction - standards
Multiplexing
Phenotype
Population genetics
Rh-Hr Blood-Group System - genetics
RHD variant alleles
Sampling methods
the Chinese population
Zygosity
title RHD genotype and zygosity analysis in the Chinese Southern Han D+, D− and D variant donors using the multiplex ligation‐dependent probe amplification assay
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