Uliginosibacterium sangjuense sp. nov., isolated from sediment of the Nakdong River

A Gram-negative, aerobic, motile by flagella, and light yellow bacterium, designated SS1-76 T , was isolated from sediment of the Nakdong River in Sangju-si, Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the isolate SS1-76 T belongs to the genus Uliginosibac...

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Published in:Antonie van Leeuwenhoek 2018-02, Vol.111 (2), p.259-264
Main Authors: Han, Ji-Hye, Baek, Kiwoon, Ahn, Young-Hee, Lee, Wook Jae, Lee, Mi-Hwa
Format: Article
Language:English
Subjects:
Biomedical and Life Sciences
Coenzyme Q8
Deoxyribonucleic acid
DNA
Fatty acids
Flagella
Gene sequencing
Life Sciences
Lipids
Medical Microbiology
Microbiology
New species
Next-generation sequencing
Original Paper
Phosphatidylethanolamine
Phosphatidylglycerol
Phylogenetics
Phylogeny
Plant Sciences
Quinones
Rivers
rRNA 16S
Soil Science & Conservation
Ubiquinone
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description A Gram-negative, aerobic, motile by flagella, and light yellow bacterium, designated SS1-76 T , was isolated from sediment of the Nakdong River in Sangju-si, Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the isolate SS1-76 T belongs to the genus Uliginosibacterium of the family Rhodocyclaceae , exhibiting high sequence similarity with the type strains of Uliginosibacterium gangwonense 5YN10-9 T (96.0%) and Uliginosibacterium paludis KBP-13 T (94.9%). Strain SS1-76 T contains ubiquinone-8 as a respiratory quinone and summed feature 3 (C 16:1 ω 7 c and/or C 16:1 ω 6 c ), C 16:0 , and C 14:0 as major fatty acids. The cellular polar lipids are composed of phosphatidylethanolamine, phosphatidylglycerol, and unidentified aminophospholipids. The DNA G+C content was 65.3 mol%. Phenotypic, chemotaxonomic, and phylogenetic evidence clearly indicated that strain SS1-76 T represents a novel species of the genus Uliginosibacterium , for which the name Uliginosibacterium sangjuense sp. nov. is proposed. The type strain is SS1-76 T (= KCTC 52159 T  = JCM 31375 T ).
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source Springer Nature
subjects Biomedical and Life Sciences
Coenzyme Q8
Deoxyribonucleic acid
DNA
Fatty acids
Flagella
Gene sequencing
Life Sciences
Lipids
Medical Microbiology
Microbiology
New species
Next-generation sequencing
Original Paper
Phosphatidylethanolamine
Phosphatidylglycerol
Phylogenetics
Phylogeny
Plant Sciences
Quinones
Rivers
rRNA 16S
Soil Science & Conservation
Ubiquinone
title Uliginosibacterium sangjuense sp. nov., isolated from sediment of the Nakdong River
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