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Tumor Heterogeneity Predicts Metastatic Potential in Colorectal Cancer
Tumors continuously evolve to maintain growth; secondary mutations facilitate this process, resulting in high tumor heterogeneity. In this study, we compared mutations in paired primary and metastatic colorectal cancer tumor samples to determine whether tumor heterogeneity can predict tumor metastas...
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Published in: | Clinical cancer research 2017-12, Vol.23 (23), p.7209-7216 |
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creator | Joung, Je-Gun Oh, Bo Young Hong, Hye Kyung Al-Khalidi, Hisham Al-Alem, Faisal Lee, Hae-Ock Bae, Joon Seol Kim, Jinho Cha, Hong-Ui Alotaibi, Maram Cho, Yong Beom Hassanain, Mazen Park, Woong-Yang Lee, Woo Yong |
description | Tumors continuously evolve to maintain growth; secondary mutations facilitate this process, resulting in high tumor heterogeneity. In this study, we compared mutations in paired primary and metastatic colorectal cancer tumor samples to determine whether tumor heterogeneity can predict tumor metastasis.
Somatic variations in 46 pairs of matched primary-liver metastatic tumors and 42 primary tumors without metastasis were analyzed by whole-exome sequencing. Tumor clonality was estimated from single-nucleotide and copy-number variations. The correlation between clinical parameters of patients and clonal heterogeneity in liver metastasis was evaluated.
Tumor heterogeneity across colorectal cancer samples was highly variable; however, a high degree of tumor heterogeneity was associated with a worse disease-free survival. Highly heterogeneous primary colorectal cancer was correlated with a higher rate of liver metastasis. Recurrent somatic mutations in
, and
were frequently detected in highly heterogeneous colorectal cancer. The variant allele frequency of these mutations was high, while somatic mutations in other genes such as
and
were low. The number and distribution of primary colorectal cancer subclones were preserved in metastatic tumors.
Heterogeneity of primary colorectal cancer tumors can predict the potential for liver metastasis and thus, clinical outcome of patients.
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doi_str_mv | 10.1158/1078-0432.CCR-17-0306 |
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Somatic variations in 46 pairs of matched primary-liver metastatic tumors and 42 primary tumors without metastasis were analyzed by whole-exome sequencing. Tumor clonality was estimated from single-nucleotide and copy-number variations. The correlation between clinical parameters of patients and clonal heterogeneity in liver metastasis was evaluated.
Tumor heterogeneity across colorectal cancer samples was highly variable; however, a high degree of tumor heterogeneity was associated with a worse disease-free survival. Highly heterogeneous primary colorectal cancer was correlated with a higher rate of liver metastasis. Recurrent somatic mutations in
, and
were frequently detected in highly heterogeneous colorectal cancer. The variant allele frequency of these mutations was high, while somatic mutations in other genes such as
and
were low. The number and distribution of primary colorectal cancer subclones were preserved in metastatic tumors.
Heterogeneity of primary colorectal cancer tumors can predict the potential for liver metastasis and thus, clinical outcome of patients.
.</description><identifier>ISSN: 1078-0432</identifier><identifier>EISSN: 1557-3265</identifier><identifier>DOI: 10.1158/1078-0432.CCR-17-0306</identifier><identifier>PMID: 28939741</identifier><language>eng</language><publisher>United States: American Association for Cancer Research Inc</publisher><subject>Adenomatous polyposis coli ; Cancer ; Colorectal cancer ; Colorectal carcinoma ; Experimental design ; Gene frequency ; Heterogeneity ; K-Ras protein ; Liver ; Metastases ; Metastasis ; Mutation ; p53 Protein ; Patients ; Sequences ; Tumors</subject><ispartof>Clinical cancer research, 2017-12, Vol.23 (23), p.7209-7216</ispartof><rights>2017 American Association for Cancer Research.</rights><rights>Copyright American Association for Cancer Research Inc Dec 1, 2017</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c384t-12fa6ac6b3870e4fce32f540cf61793da59543dfa74257f74564dfcec3b37e7a3</citedby><cites>FETCH-LOGICAL-c384t-12fa6ac6b3870e4fce32f540cf61793da59543dfa74257f74564dfcec3b37e7a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28939741$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Joung, Je-Gun</creatorcontrib><creatorcontrib>Oh, Bo Young</creatorcontrib><creatorcontrib>Hong, Hye Kyung</creatorcontrib><creatorcontrib>Al-Khalidi, Hisham</creatorcontrib><creatorcontrib>Al-Alem, Faisal</creatorcontrib><creatorcontrib>Lee, Hae-Ock</creatorcontrib><creatorcontrib>Bae, Joon Seol</creatorcontrib><creatorcontrib>Kim, Jinho</creatorcontrib><creatorcontrib>Cha, Hong-Ui</creatorcontrib><creatorcontrib>Alotaibi, Maram</creatorcontrib><creatorcontrib>Cho, Yong Beom</creatorcontrib><creatorcontrib>Hassanain, Mazen</creatorcontrib><creatorcontrib>Park, Woong-Yang</creatorcontrib><creatorcontrib>Lee, Woo Yong</creatorcontrib><title>Tumor Heterogeneity Predicts Metastatic Potential in Colorectal Cancer</title><title>Clinical cancer research</title><addtitle>Clin Cancer Res</addtitle><description>Tumors continuously evolve to maintain growth; secondary mutations facilitate this process, resulting in high tumor heterogeneity. In this study, we compared mutations in paired primary and metastatic colorectal cancer tumor samples to determine whether tumor heterogeneity can predict tumor metastasis.
Somatic variations in 46 pairs of matched primary-liver metastatic tumors and 42 primary tumors without metastasis were analyzed by whole-exome sequencing. Tumor clonality was estimated from single-nucleotide and copy-number variations. The correlation between clinical parameters of patients and clonal heterogeneity in liver metastasis was evaluated.
Tumor heterogeneity across colorectal cancer samples was highly variable; however, a high degree of tumor heterogeneity was associated with a worse disease-free survival. Highly heterogeneous primary colorectal cancer was correlated with a higher rate of liver metastasis. Recurrent somatic mutations in
, and
were frequently detected in highly heterogeneous colorectal cancer. The variant allele frequency of these mutations was high, while somatic mutations in other genes such as
and
were low. The number and distribution of primary colorectal cancer subclones were preserved in metastatic tumors.
Heterogeneity of primary colorectal cancer tumors can predict the potential for liver metastasis and thus, clinical outcome of patients.
.</description><subject>Adenomatous polyposis coli</subject><subject>Cancer</subject><subject>Colorectal cancer</subject><subject>Colorectal carcinoma</subject><subject>Experimental design</subject><subject>Gene frequency</subject><subject>Heterogeneity</subject><subject>K-Ras protein</subject><subject>Liver</subject><subject>Metastases</subject><subject>Metastasis</subject><subject>Mutation</subject><subject>p53 Protein</subject><subject>Patients</subject><subject>Sequences</subject><subject>Tumors</subject><issn>1078-0432</issn><issn>1557-3265</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNpdkEFLwzAUx4MoTqcfQSl48dKZNEnTHqU4J0wcMs8hS1-ko21mkh727U3Z5sHTew9-_z-PH0J3BM8I4cUTwaJIMaPZrKo-UyJSTHF-hq4I5yKlWc7P435iJuja-y3GhBHMLtEkK0paCkau0Hw9dNYlCwjg7Df00IR9snJQNzr45B2C8kGFRicrG6APjWqTpk8q21oHOsSrUr0Gd4MujGo93B7nFH3NX9bVIl1-vL5Vz8tU04KFlGRG5UrnG1oIDMxooJnhDGuTE1HSWvGSM1obJVjGhRGM56yOlKYbKkAoOkWPh96dsz8D-CC7xmtoW9WDHbwkJcsEzjktIvrwD93awfXxu0gVlBGBeRkpfqC0s947MHLnmk65vSRYjqLlKFGOEmUULYmQo-iYuz-2D5sO6r_UySz9BcV0eJ4</recordid><startdate>20171201</startdate><enddate>20171201</enddate><creator>Joung, Je-Gun</creator><creator>Oh, Bo Young</creator><creator>Hong, Hye Kyung</creator><creator>Al-Khalidi, Hisham</creator><creator>Al-Alem, Faisal</creator><creator>Lee, Hae-Ock</creator><creator>Bae, Joon Seol</creator><creator>Kim, Jinho</creator><creator>Cha, Hong-Ui</creator><creator>Alotaibi, Maram</creator><creator>Cho, Yong Beom</creator><creator>Hassanain, Mazen</creator><creator>Park, Woong-Yang</creator><creator>Lee, Woo Yong</creator><general>American Association for Cancer Research Inc</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7T5</scope><scope>7TO</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20171201</creationdate><title>Tumor Heterogeneity Predicts Metastatic Potential in Colorectal Cancer</title><author>Joung, Je-Gun ; Oh, Bo Young ; Hong, Hye Kyung ; Al-Khalidi, Hisham ; Al-Alem, Faisal ; Lee, Hae-Ock ; Bae, Joon Seol ; Kim, Jinho ; Cha, Hong-Ui ; Alotaibi, Maram ; Cho, Yong Beom ; Hassanain, Mazen ; Park, Woong-Yang ; Lee, Woo Yong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c384t-12fa6ac6b3870e4fce32f540cf61793da59543dfa74257f74564dfcec3b37e7a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Adenomatous polyposis coli</topic><topic>Cancer</topic><topic>Colorectal cancer</topic><topic>Colorectal carcinoma</topic><topic>Experimental design</topic><topic>Gene frequency</topic><topic>Heterogeneity</topic><topic>K-Ras protein</topic><topic>Liver</topic><topic>Metastases</topic><topic>Metastasis</topic><topic>Mutation</topic><topic>p53 Protein</topic><topic>Patients</topic><topic>Sequences</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Joung, Je-Gun</creatorcontrib><creatorcontrib>Oh, Bo Young</creatorcontrib><creatorcontrib>Hong, Hye Kyung</creatorcontrib><creatorcontrib>Al-Khalidi, Hisham</creatorcontrib><creatorcontrib>Al-Alem, Faisal</creatorcontrib><creatorcontrib>Lee, Hae-Ock</creatorcontrib><creatorcontrib>Bae, Joon Seol</creatorcontrib><creatorcontrib>Kim, Jinho</creatorcontrib><creatorcontrib>Cha, Hong-Ui</creatorcontrib><creatorcontrib>Alotaibi, Maram</creatorcontrib><creatorcontrib>Cho, Yong Beom</creatorcontrib><creatorcontrib>Hassanain, Mazen</creatorcontrib><creatorcontrib>Park, Woong-Yang</creatorcontrib><creatorcontrib>Lee, Woo Yong</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Immunology Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Clinical cancer research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Joung, Je-Gun</au><au>Oh, Bo Young</au><au>Hong, Hye Kyung</au><au>Al-Khalidi, Hisham</au><au>Al-Alem, Faisal</au><au>Lee, Hae-Ock</au><au>Bae, Joon Seol</au><au>Kim, Jinho</au><au>Cha, Hong-Ui</au><au>Alotaibi, Maram</au><au>Cho, Yong Beom</au><au>Hassanain, Mazen</au><au>Park, Woong-Yang</au><au>Lee, Woo Yong</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Tumor Heterogeneity Predicts Metastatic Potential in Colorectal Cancer</atitle><jtitle>Clinical cancer research</jtitle><addtitle>Clin Cancer Res</addtitle><date>2017-12-01</date><risdate>2017</risdate><volume>23</volume><issue>23</issue><spage>7209</spage><epage>7216</epage><pages>7209-7216</pages><issn>1078-0432</issn><eissn>1557-3265</eissn><abstract>Tumors continuously evolve to maintain growth; secondary mutations facilitate this process, resulting in high tumor heterogeneity. In this study, we compared mutations in paired primary and metastatic colorectal cancer tumor samples to determine whether tumor heterogeneity can predict tumor metastasis.
Somatic variations in 46 pairs of matched primary-liver metastatic tumors and 42 primary tumors without metastasis were analyzed by whole-exome sequencing. Tumor clonality was estimated from single-nucleotide and copy-number variations. The correlation between clinical parameters of patients and clonal heterogeneity in liver metastasis was evaluated.
Tumor heterogeneity across colorectal cancer samples was highly variable; however, a high degree of tumor heterogeneity was associated with a worse disease-free survival. Highly heterogeneous primary colorectal cancer was correlated with a higher rate of liver metastasis. Recurrent somatic mutations in
, and
were frequently detected in highly heterogeneous colorectal cancer. The variant allele frequency of these mutations was high, while somatic mutations in other genes such as
and
were low. The number and distribution of primary colorectal cancer subclones were preserved in metastatic tumors.
Heterogeneity of primary colorectal cancer tumors can predict the potential for liver metastasis and thus, clinical outcome of patients.
.</abstract><cop>United States</cop><pub>American Association for Cancer Research Inc</pub><pmid>28939741</pmid><doi>10.1158/1078-0432.CCR-17-0306</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adenomatous polyposis coli Cancer Colorectal cancer Colorectal carcinoma Experimental design Gene frequency Heterogeneity K-Ras protein Liver Metastases Metastasis Mutation p53 Protein Patients Sequences Tumors |
title | Tumor Heterogeneity Predicts Metastatic Potential in Colorectal Cancer |
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