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Maize cystatins respond to developmental cues, cold stress and drought
Comprehensive searches of maize EST data allowed us to identify 8 novel Corn Cystatin ( CC) genes in addition to the previously known genes CCI and CCII. The deduced amino acid sequences of all 10 genes contain the typical cystatin family signature. In addition, they show an extended overall similar...
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Published in: | Biochimica et biophysica acta 2005-07, Vol.1729 (3), p.186-199 |
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creator | Massonneau, Agnès Condamine, Pascal Wisniewski, Jean-Pierre Zivy, Michel Rogowsky, Peter M. |
description | Comprehensive searches of maize EST data allowed us to identify 8 novel
Corn Cystatin (
CC) genes in addition to the previously known genes
CCI and
CCII. The deduced amino acid sequences of all 10 genes contain the typical cystatin family signature. In addition, they show an extended overall similarity with cystatins from other species that belong to several different phyto-cystatin subfamilies. To gain further insight into their respective roles in the maize plant, gene-specific expression profiles were established by semi-quantitative RT-PCR. While 7
CC genes were expressed in two or more tissues varying from gene to gene,
CCI was preferentially expressed in immature tassels and
CC8 and
CC10 in developing kernels. As shown by in situ hybridisation of maize kernels,
CC8 was specifically expressed in the basal region of the endosperm and
CC10 both in the starchy endosperm and the scutellum of the embryo. The remaining, not kernel-specific genes, all had distinct expression kinetics during kernel development, generally with peaks during the early stages. In addition to developmental regulation, the effect of cold stress and water starvation were tested on cystatin expression. Two genes (
CC8 and
CC9) were induced by cold stress and 5 genes (
CCII,
CC3,
CC4,
CC5 and
CC9) were down-regulated in response to water starvation. Taken together our data suggest distinct functions for
CC genes in the maize plant. |
doi_str_mv | 10.1016/j.bbaexp.2005.05.004 |
format | article |
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Corn Cystatin (
CC) genes in addition to the previously known genes
CCI and
CCII. The deduced amino acid sequences of all 10 genes contain the typical cystatin family signature. In addition, they show an extended overall similarity with cystatins from other species that belong to several different phyto-cystatin subfamilies. To gain further insight into their respective roles in the maize plant, gene-specific expression profiles were established by semi-quantitative RT-PCR. While 7
CC genes were expressed in two or more tissues varying from gene to gene,
CCI was preferentially expressed in immature tassels and
CC8 and
CC10 in developing kernels. As shown by in situ hybridisation of maize kernels,
CC8 was specifically expressed in the basal region of the endosperm and
CC10 both in the starchy endosperm and the scutellum of the embryo. The remaining, not kernel-specific genes, all had distinct expression kinetics during kernel development, generally with peaks during the early stages. In addition to developmental regulation, the effect of cold stress and water starvation were tested on cystatin expression. Two genes (
CC8 and
CC9) were induced by cold stress and 5 genes (
CCII,
CC3,
CC4,
CC5 and
CC9) were down-regulated in response to water starvation. Taken together our data suggest distinct functions for
CC genes in the maize plant.</description><identifier>ISSN: 0167-4781</identifier><identifier>ISSN: 0006-3002</identifier><identifier>EISSN: 1879-2634</identifier><identifier>DOI: 10.1016/j.bbaexp.2005.05.004</identifier><identifier>PMID: 15979170</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Amino Acid Sequence ; Cold Temperature ; Cues ; Cystatin ; Cystatins - genetics ; Disasters ; Gene Expression Profiling ; Gene Expression Regulation, Plant ; Kernel ; Life Sciences ; Maize ; Molecular Sequence Data ; Phylogeny ; Reproductive Biology ; Reverse Transcriptase Polymerase Chain Reaction ; Seeds - growth & development ; Seeds - metabolism ; Sequence Homology, Amino Acid ; Stress ; Zea mays ; Zea mays - growth & development ; Zea mays - metabolism</subject><ispartof>Biochimica et biophysica acta, 2005-07, Vol.1729 (3), p.186-199</ispartof><rights>2005 Elsevier B.V.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c425t-acfe78c74f87174eb5afb85af653b698a5e47ccf0d2ec5a48813825c40558a0b3</citedby><cites>FETCH-LOGICAL-c425t-acfe78c74f87174eb5afb85af653b698a5e47ccf0d2ec5a48813825c40558a0b3</cites><orcidid>0000-0002-9814-3792 ; 0000-0003-4822-3783</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,885,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15979170$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.science/hal-00188830$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Massonneau, Agnès</creatorcontrib><creatorcontrib>Condamine, Pascal</creatorcontrib><creatorcontrib>Wisniewski, Jean-Pierre</creatorcontrib><creatorcontrib>Zivy, Michel</creatorcontrib><creatorcontrib>Rogowsky, Peter M.</creatorcontrib><title>Maize cystatins respond to developmental cues, cold stress and drought</title><title>Biochimica et biophysica acta</title><addtitle>Biochim Biophys Acta</addtitle><description>Comprehensive searches of maize EST data allowed us to identify 8 novel
Corn Cystatin (
CC) genes in addition to the previously known genes
CCI and
CCII. The deduced amino acid sequences of all 10 genes contain the typical cystatin family signature. In addition, they show an extended overall similarity with cystatins from other species that belong to several different phyto-cystatin subfamilies. To gain further insight into their respective roles in the maize plant, gene-specific expression profiles were established by semi-quantitative RT-PCR. While 7
CC genes were expressed in two or more tissues varying from gene to gene,
CCI was preferentially expressed in immature tassels and
CC8 and
CC10 in developing kernels. As shown by in situ hybridisation of maize kernels,
CC8 was specifically expressed in the basal region of the endosperm and
CC10 both in the starchy endosperm and the scutellum of the embryo. The remaining, not kernel-specific genes, all had distinct expression kinetics during kernel development, generally with peaks during the early stages. In addition to developmental regulation, the effect of cold stress and water starvation were tested on cystatin expression. Two genes (
CC8 and
CC9) were induced by cold stress and 5 genes (
CCII,
CC3,
CC4,
CC5 and
CC9) were down-regulated in response to water starvation. Taken together our data suggest distinct functions for
CC genes in the maize plant.</description><subject>Amino Acid Sequence</subject><subject>Cold Temperature</subject><subject>Cues</subject><subject>Cystatin</subject><subject>Cystatins - genetics</subject><subject>Disasters</subject><subject>Gene Expression Profiling</subject><subject>Gene Expression Regulation, Plant</subject><subject>Kernel</subject><subject>Life Sciences</subject><subject>Maize</subject><subject>Molecular Sequence Data</subject><subject>Phylogeny</subject><subject>Reproductive Biology</subject><subject>Reverse Transcriptase Polymerase Chain Reaction</subject><subject>Seeds - growth & development</subject><subject>Seeds - metabolism</subject><subject>Sequence Homology, Amino Acid</subject><subject>Stress</subject><subject>Zea mays</subject><subject>Zea mays - growth & development</subject><subject>Zea mays - metabolism</subject><issn>0167-4781</issn><issn>0006-3002</issn><issn>1879-2634</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><recordid>eNqFkU9LxDAQxYMouq5-A5GeBMGuSZs06UUQ8R-seNFzSNOpm6Xb1CS7qJ_elC560zBkIPzmzSMPoROCZwST4nI5qyoFH_0sw5jNhsJ0B02I4GWaFTndRZOI8ZRyQQ7QofdLHE9Bin10QFjJS8LxBN09KfMFif70QQXT-cSB721XJ8EmNWygtf0KuqDaRK_BXyTatnXiQ6R8oiJWO7t-W4QjtNeo1sPxtk_R693ty81DOn--f7y5nqeaZiykSjfAhea0EZxwChVTTSXiVbC8KkqhGFCudYPrDDRTVAiSi4xpihkTClf5FJ2PugvVyt6ZlXKf0iojH67ncnjDmAghcrwhkT0b2d7Z92g-yJXxGtpWdWDXXhYCk5yK7F-QlJRGg3kE6QhqZ7130PxYIFgOocilHEORQyhyKEzj2OlWf12toP4d2qYQgasRgPh1GwNOem2g01AbBzrI2pq_N3wDOqeekw</recordid><startdate>20050710</startdate><enddate>20050710</enddate><creator>Massonneau, Agnès</creator><creator>Condamine, Pascal</creator><creator>Wisniewski, Jean-Pierre</creator><creator>Zivy, Michel</creator><creator>Rogowsky, Peter M.</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>7X8</scope><scope>1XC</scope><orcidid>https://orcid.org/0000-0002-9814-3792</orcidid><orcidid>https://orcid.org/0000-0003-4822-3783</orcidid></search><sort><creationdate>20050710</creationdate><title>Maize cystatins respond to developmental cues, cold stress and drought</title><author>Massonneau, Agnès ; Condamine, Pascal ; Wisniewski, Jean-Pierre ; Zivy, Michel ; Rogowsky, Peter M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c425t-acfe78c74f87174eb5afb85af653b698a5e47ccf0d2ec5a48813825c40558a0b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Amino Acid Sequence</topic><topic>Cold Temperature</topic><topic>Cues</topic><topic>Cystatin</topic><topic>Cystatins - genetics</topic><topic>Disasters</topic><topic>Gene Expression Profiling</topic><topic>Gene Expression Regulation, Plant</topic><topic>Kernel</topic><topic>Life Sciences</topic><topic>Maize</topic><topic>Molecular Sequence Data</topic><topic>Phylogeny</topic><topic>Reproductive Biology</topic><topic>Reverse Transcriptase Polymerase Chain Reaction</topic><topic>Seeds - growth & development</topic><topic>Seeds - metabolism</topic><topic>Sequence Homology, Amino Acid</topic><topic>Stress</topic><topic>Zea mays</topic><topic>Zea mays - growth & development</topic><topic>Zea mays - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Massonneau, Agnès</creatorcontrib><creatorcontrib>Condamine, Pascal</creatorcontrib><creatorcontrib>Wisniewski, Jean-Pierre</creatorcontrib><creatorcontrib>Zivy, Michel</creatorcontrib><creatorcontrib>Rogowsky, Peter M.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>Biochimica et biophysica acta</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Massonneau, Agnès</au><au>Condamine, Pascal</au><au>Wisniewski, Jean-Pierre</au><au>Zivy, Michel</au><au>Rogowsky, Peter M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Maize cystatins respond to developmental cues, cold stress and drought</atitle><jtitle>Biochimica et biophysica acta</jtitle><addtitle>Biochim Biophys Acta</addtitle><date>2005-07-10</date><risdate>2005</risdate><volume>1729</volume><issue>3</issue><spage>186</spage><epage>199</epage><pages>186-199</pages><issn>0167-4781</issn><issn>0006-3002</issn><eissn>1879-2634</eissn><abstract>Comprehensive searches of maize EST data allowed us to identify 8 novel
Corn Cystatin (
CC) genes in addition to the previously known genes
CCI and
CCII. The deduced amino acid sequences of all 10 genes contain the typical cystatin family signature. In addition, they show an extended overall similarity with cystatins from other species that belong to several different phyto-cystatin subfamilies. To gain further insight into their respective roles in the maize plant, gene-specific expression profiles were established by semi-quantitative RT-PCR. While 7
CC genes were expressed in two or more tissues varying from gene to gene,
CCI was preferentially expressed in immature tassels and
CC8 and
CC10 in developing kernels. As shown by in situ hybridisation of maize kernels,
CC8 was specifically expressed in the basal region of the endosperm and
CC10 both in the starchy endosperm and the scutellum of the embryo. The remaining, not kernel-specific genes, all had distinct expression kinetics during kernel development, generally with peaks during the early stages. In addition to developmental regulation, the effect of cold stress and water starvation were tested on cystatin expression. Two genes (
CC8 and
CC9) were induced by cold stress and 5 genes (
CCII,
CC3,
CC4,
CC5 and
CC9) were down-regulated in response to water starvation. Taken together our data suggest distinct functions for
CC genes in the maize plant.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>15979170</pmid><doi>10.1016/j.bbaexp.2005.05.004</doi><tpages>14</tpages><orcidid>https://orcid.org/0000-0002-9814-3792</orcidid><orcidid>https://orcid.org/0000-0003-4822-3783</orcidid></addata></record> |
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subjects | Amino Acid Sequence Cold Temperature Cues Cystatin Cystatins - genetics Disasters Gene Expression Profiling Gene Expression Regulation, Plant Kernel Life Sciences Maize Molecular Sequence Data Phylogeny Reproductive Biology Reverse Transcriptase Polymerase Chain Reaction Seeds - growth & development Seeds - metabolism Sequence Homology, Amino Acid Stress Zea mays Zea mays - growth & development Zea mays - metabolism |
title | Maize cystatins respond to developmental cues, cold stress and drought |
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