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Historical diversification of floodplain forest specialist species in the Amazon: a case study with two species of the avian genus Xiphorhynchus (Aves: Dendrocolaptidae)

Phylogeographical and population genetics methods are used to reconstruct the diversification history of two species of the genus Xiphorhynchus (Aves: Dendrocolaptidae) associated with seasonally flooded forest types in Amazonia. Sequences of the mitochondrial gene cytochrome b were assessed for 21...

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Published in:Biological journal of the Linnean Society 2006-10, Vol.89 (2), p.383-395
Main Author: ALEIXO, ALEXANDRE
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description Phylogeographical and population genetics methods are used to reconstruct the diversification history of two species of the genus Xiphorhynchus (Aves: Dendrocolaptidae) associated with seasonally flooded forest types in Amazonia. Sequences of the mitochondrial gene cytochrome b were assessed for 21 and 30 individuals, belonging to eight and ten populations, of Xiphorhynchus kienerii and Xiphorhynchus obsoletus, respectively. Uncorrected genetic distances among unique haplotypes recovered ranged only from 0.01% to 0.4% for both species. Over 90% of the genetic variation detected in both species was partitioned within populations, and therefore was not structured geographically. Mismatch distributions and values of Tajima's D-tests indicate that both X. kienerii and X. obsoletus have had small evolutionary effective population sizes, but experienced a recent demographic expansion. These demographic expansions are tentatively dated as occurring over the last 18 000 years BP, a time frame which coincides with the establishment of the early and mid-Holocene age floodplain forest in most of central and eastern Amazonia, following a period of increased river stages throughout the basin. Based on phylogenetic, phylogeographical, and populations genetics data obtained for X. kienerii and X. obsoletus, an evolutionary scenario is proposed to account for the historical diversification of floodplain specialist species in Amazonia.
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Biological and molecular evolution</topic><topic>phylogenetics</topic><topic>phylogeography</topic><topic>population genetics</topic><topic>seasonally flooded forest</topic><topic>upland (terra-firme) forest</topic><topic>vertebrates</topic><topic>Xiphorhynchus kienerii</topic><topic>Xiphorhynchus obsoletus</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>ALEIXO, ALEXANDRE</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Ecology Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><jtitle>Biological journal of the Linnean Society</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>ALEIXO, ALEXANDRE</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Historical diversification of floodplain forest specialist species in the Amazon: a case study with two species of the avian genus Xiphorhynchus (Aves: Dendrocolaptidae)</atitle><jtitle>Biological journal of the Linnean Society</jtitle><date>2006-10</date><risdate>2006</risdate><volume>89</volume><issue>2</issue><spage>383</spage><epage>395</epage><pages>383-395</pages><issn>0024-4066</issn><eissn>1095-8312</eissn><coden>BJLSBG</coden><abstract>Phylogeographical and population genetics methods are used to reconstruct the diversification history of two species of the genus Xiphorhynchus (Aves: Dendrocolaptidae) associated with seasonally flooded forest types in Amazonia. 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ispartof Biological journal of the Linnean Society, 2006-10, Vol.89 (2), p.383-395
issn 0024-4066
1095-8312
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source Oxford Journals Online
subjects Amazonian biogeography
Aves
Biological and medical sciences
Biological evolution
evolution
Forestry
Fundamental and applied biological sciences. Psychology
General forest ecology
Generalities. Production, biomass. Quality of wood and forest products. General forest ecology
Genetics of eukaryotes. Biological and molecular evolution
phylogenetics
phylogeography
population genetics
seasonally flooded forest
upland (terra-firme) forest
vertebrates
Xiphorhynchus kienerii
Xiphorhynchus obsoletus
title Historical diversification of floodplain forest specialist species in the Amazon: a case study with two species of the avian genus Xiphorhynchus (Aves: Dendrocolaptidae)
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