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Targeted gene panel sequencing prenatally detects two novel mutations of DYNC2H1 in a fetus with increased biparietal diameter and polyhydramnios
Background Genetic skeletal disorders (GSDs) are clinically and genetically heterogeneous with more than 350 genes accounting for the diversity of disease phenotypes. Prenatal diagnosis of these disorders has been challenging because of the limited but variable prenatal phenotypes, highlighting the...
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Published in: | Birth defects research 2018-03, Vol.110 (4), p.364-371 |
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container_title | Birth defects research |
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creator | Deng, Linbei Cheung, Sau Wai Schmitt, Eric S. Xiong, Shiyi Yuan, Meizhen Chen, Zhonghai Chen, Lei Sun, Luming |
description | Background
Genetic skeletal disorders (GSDs) are clinically and genetically heterogeneous with more than 350 genes accounting for the diversity of disease phenotypes. Prenatal diagnosis of these disorders has been challenging because of the limited but variable prenatal phenotypes, highlighting the need of a novel genetic approach. Short‐rib polydactyly syndrome (SRPS) Type III is an autosomal recessive GSD characterized by extreme narrowness of the thorax, severely shortened tubular bones, polydactyly and multiple malformations.
Methods
Cytogenetic and molecular analyses using GTG‐banding, single nucleotide polymorphism array and a novel GSDs targeted gene panel sequencing were performed in a 24 weeks fetus with increased biparietal diameter (BPD), short limbs, narrow thorax and polyhydramnios.
Results
No chromosomal abnormalities and pathogenic copy number variations (CNVs) were detected in the fetus. Two novel compound heterozygous mutations c.2992C > T and c.12836G > C in the DYNC2H1 gene were identified by targeted genes panel sequencing. A literature review was performed to delineate the prenatal phenotype of SRPS Type III.
Conclusion
This is the first report of prenatal diagnosis of DYNC2H1 mutations causing SRPS Type III in a fetus with increased BPD associated with polyhydramnios in China. Our findings expand the mutation spectrum of DYNC2H1 in this rare disease and demonstrate that targeted gene panel capture followed by next‐generation sequencing (NGS) is an efficient and cost‐effective method to perform a molecular prenatal diagnosis of a rare genetic skeletal disorder. |
doi_str_mv | 10.1002/bdr2.1146 |
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Genetic skeletal disorders (GSDs) are clinically and genetically heterogeneous with more than 350 genes accounting for the diversity of disease phenotypes. Prenatal diagnosis of these disorders has been challenging because of the limited but variable prenatal phenotypes, highlighting the need of a novel genetic approach. Short‐rib polydactyly syndrome (SRPS) Type III is an autosomal recessive GSD characterized by extreme narrowness of the thorax, severely shortened tubular bones, polydactyly and multiple malformations.
Methods
Cytogenetic and molecular analyses using GTG‐banding, single nucleotide polymorphism array and a novel GSDs targeted gene panel sequencing were performed in a 24 weeks fetus with increased biparietal diameter (BPD), short limbs, narrow thorax and polyhydramnios.
Results
No chromosomal abnormalities and pathogenic copy number variations (CNVs) were detected in the fetus. Two novel compound heterozygous mutations c.2992C > T and c.12836G > C in the DYNC2H1 gene were identified by targeted genes panel sequencing. A literature review was performed to delineate the prenatal phenotype of SRPS Type III.
Conclusion
This is the first report of prenatal diagnosis of DYNC2H1 mutations causing SRPS Type III in a fetus with increased BPD associated with polyhydramnios in China. Our findings expand the mutation spectrum of DYNC2H1 in this rare disease and demonstrate that targeted gene panel capture followed by next‐generation sequencing (NGS) is an efficient and cost‐effective method to perform a molecular prenatal diagnosis of a rare genetic skeletal disorder.</description><identifier>ISSN: 2472-1727</identifier><identifier>EISSN: 2472-1727</identifier><identifier>DOI: 10.1002/bdr2.1146</identifier><identifier>PMID: 29359448</identifier><language>eng</language><publisher>United States</publisher><subject>DYNC2H1 ; increased biparietal diameter ; polyhydramnios ; prenatal diagnosis ; rare genetic skeletal disorders ; short‐rib polydactyly syndrome type III ; targeted genes panel sequencing</subject><ispartof>Birth defects research, 2018-03, Vol.110 (4), p.364-371</ispartof><rights>2018 Wiley Periodicals, Inc</rights><rights>2018 Wiley Periodicals, Inc.</rights><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3256-b3c7618e11ab918e43a7d4cea0d53c0da8d80f6e97da2e53041641867a5abc2f3</citedby><cites>FETCH-LOGICAL-c3256-b3c7618e11ab918e43a7d4cea0d53c0da8d80f6e97da2e53041641867a5abc2f3</cites><orcidid>0000-0001-9457-7764</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29359448$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Deng, Linbei</creatorcontrib><creatorcontrib>Cheung, Sau Wai</creatorcontrib><creatorcontrib>Schmitt, Eric S.</creatorcontrib><creatorcontrib>Xiong, Shiyi</creatorcontrib><creatorcontrib>Yuan, Meizhen</creatorcontrib><creatorcontrib>Chen, Zhonghai</creatorcontrib><creatorcontrib>Chen, Lei</creatorcontrib><creatorcontrib>Sun, Luming</creatorcontrib><title>Targeted gene panel sequencing prenatally detects two novel mutations of DYNC2H1 in a fetus with increased biparietal diameter and polyhydramnios</title><title>Birth defects research</title><addtitle>Birth Defects Res</addtitle><description>Background
Genetic skeletal disorders (GSDs) are clinically and genetically heterogeneous with more than 350 genes accounting for the diversity of disease phenotypes. Prenatal diagnosis of these disorders has been challenging because of the limited but variable prenatal phenotypes, highlighting the need of a novel genetic approach. Short‐rib polydactyly syndrome (SRPS) Type III is an autosomal recessive GSD characterized by extreme narrowness of the thorax, severely shortened tubular bones, polydactyly and multiple malformations.
Methods
Cytogenetic and molecular analyses using GTG‐banding, single nucleotide polymorphism array and a novel GSDs targeted gene panel sequencing were performed in a 24 weeks fetus with increased biparietal diameter (BPD), short limbs, narrow thorax and polyhydramnios.
Results
No chromosomal abnormalities and pathogenic copy number variations (CNVs) were detected in the fetus. Two novel compound heterozygous mutations c.2992C > T and c.12836G > C in the DYNC2H1 gene were identified by targeted genes panel sequencing. A literature review was performed to delineate the prenatal phenotype of SRPS Type III.
Conclusion
This is the first report of prenatal diagnosis of DYNC2H1 mutations causing SRPS Type III in a fetus with increased BPD associated with polyhydramnios in China. Our findings expand the mutation spectrum of DYNC2H1 in this rare disease and demonstrate that targeted gene panel capture followed by next‐generation sequencing (NGS) is an efficient and cost‐effective method to perform a molecular prenatal diagnosis of a rare genetic skeletal disorder.</description><subject>DYNC2H1</subject><subject>increased biparietal diameter</subject><subject>polyhydramnios</subject><subject>prenatal diagnosis</subject><subject>rare genetic skeletal disorders</subject><subject>short‐rib polydactyly syndrome type III</subject><subject>targeted genes panel sequencing</subject><issn>2472-1727</issn><issn>2472-1727</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNp1kc9O3DAQhy1EBQg48AKVj-WwYDvOvyNdClsJUanaHjhFE3uyuErs1Ha6ymP0jfGyUPXS08xIn77RzI-QC86uOGPiutVeXHEuiwNyImQpFrwU5eE__TE5D-EnY4xXgpdZdUSORZ3ltZTVCfmzBr_BiJpu0CIdwWJPA_6a0CpjN3T0aCFC389UJ0zFQOPWUet-J26YIkTjbKCuo7dPj0ux4tRYCrTDOAW6NfE5zcojhLShNSN4g8lGtYEh6TwFq-no-vl51h4Ga1w4Ix866AOev9VT8uPuy3q5Wjx8u_-6vHlYqEzkxaLNVFnwCjmHtk5VZlBqqRCYzjPFNFS6Yl2BdalBYJ4xyQvJq6KEHFoluuyUfNp7R-_SuSE2gwkK-z69wE2h4XXNZOI5S-jlHlXeheCxa0ZvBvBzw1mzC6HZhdDsQkjsxzft1A6o_5LvL0_A9R7Ymh7n_5uaz7ffxavyBb4dkwc</recordid><startdate>20180301</startdate><enddate>20180301</enddate><creator>Deng, Linbei</creator><creator>Cheung, Sau Wai</creator><creator>Schmitt, Eric S.</creator><creator>Xiong, Shiyi</creator><creator>Yuan, Meizhen</creator><creator>Chen, Zhonghai</creator><creator>Chen, Lei</creator><creator>Sun, Luming</creator><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-9457-7764</orcidid></search><sort><creationdate>20180301</creationdate><title>Targeted gene panel sequencing prenatally detects two novel mutations of DYNC2H1 in a fetus with increased biparietal diameter and polyhydramnios</title><author>Deng, Linbei ; Cheung, Sau Wai ; Schmitt, Eric S. ; Xiong, Shiyi ; Yuan, Meizhen ; Chen, Zhonghai ; Chen, Lei ; Sun, Luming</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3256-b3c7618e11ab918e43a7d4cea0d53c0da8d80f6e97da2e53041641867a5abc2f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>DYNC2H1</topic><topic>increased biparietal diameter</topic><topic>polyhydramnios</topic><topic>prenatal diagnosis</topic><topic>rare genetic skeletal disorders</topic><topic>short‐rib polydactyly syndrome type III</topic><topic>targeted genes panel sequencing</topic><toplevel>online_resources</toplevel><creatorcontrib>Deng, Linbei</creatorcontrib><creatorcontrib>Cheung, Sau Wai</creatorcontrib><creatorcontrib>Schmitt, Eric S.</creatorcontrib><creatorcontrib>Xiong, Shiyi</creatorcontrib><creatorcontrib>Yuan, Meizhen</creatorcontrib><creatorcontrib>Chen, Zhonghai</creatorcontrib><creatorcontrib>Chen, Lei</creatorcontrib><creatorcontrib>Sun, Luming</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Birth defects research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Deng, Linbei</au><au>Cheung, Sau Wai</au><au>Schmitt, Eric S.</au><au>Xiong, Shiyi</au><au>Yuan, Meizhen</au><au>Chen, Zhonghai</au><au>Chen, Lei</au><au>Sun, Luming</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Targeted gene panel sequencing prenatally detects two novel mutations of DYNC2H1 in a fetus with increased biparietal diameter and polyhydramnios</atitle><jtitle>Birth defects research</jtitle><addtitle>Birth Defects Res</addtitle><date>2018-03-01</date><risdate>2018</risdate><volume>110</volume><issue>4</issue><spage>364</spage><epage>371</epage><pages>364-371</pages><issn>2472-1727</issn><eissn>2472-1727</eissn><abstract>Background
Genetic skeletal disorders (GSDs) are clinically and genetically heterogeneous with more than 350 genes accounting for the diversity of disease phenotypes. Prenatal diagnosis of these disorders has been challenging because of the limited but variable prenatal phenotypes, highlighting the need of a novel genetic approach. Short‐rib polydactyly syndrome (SRPS) Type III is an autosomal recessive GSD characterized by extreme narrowness of the thorax, severely shortened tubular bones, polydactyly and multiple malformations.
Methods
Cytogenetic and molecular analyses using GTG‐banding, single nucleotide polymorphism array and a novel GSDs targeted gene panel sequencing were performed in a 24 weeks fetus with increased biparietal diameter (BPD), short limbs, narrow thorax and polyhydramnios.
Results
No chromosomal abnormalities and pathogenic copy number variations (CNVs) were detected in the fetus. Two novel compound heterozygous mutations c.2992C > T and c.12836G > C in the DYNC2H1 gene were identified by targeted genes panel sequencing. A literature review was performed to delineate the prenatal phenotype of SRPS Type III.
Conclusion
This is the first report of prenatal diagnosis of DYNC2H1 mutations causing SRPS Type III in a fetus with increased BPD associated with polyhydramnios in China. Our findings expand the mutation spectrum of DYNC2H1 in this rare disease and demonstrate that targeted gene panel capture followed by next‐generation sequencing (NGS) is an efficient and cost‐effective method to perform a molecular prenatal diagnosis of a rare genetic skeletal disorder.</abstract><cop>United States</cop><pmid>29359448</pmid><doi>10.1002/bdr2.1146</doi><tpages>8</tpages><orcidid>https://orcid.org/0000-0001-9457-7764</orcidid></addata></record> |
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subjects | DYNC2H1 increased biparietal diameter polyhydramnios prenatal diagnosis rare genetic skeletal disorders short‐rib polydactyly syndrome type III targeted genes panel sequencing |
title | Targeted gene panel sequencing prenatally detects two novel mutations of DYNC2H1 in a fetus with increased biparietal diameter and polyhydramnios |
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