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Population Structure in the Sword Prawn (Parapenaeopsis Hardwickii) from the East China Sea and Taiwan Strait Inferred from Intron Sequences
Abstract Sequence analyses on the intron from the elongation factor-1α gene were conducted to examine the population structure of sword prawn (Parapenaeopsis hardwickii) in the East China Sea and Taiwan Strait. Five samples including 207 individuals were separately collected from the north of East C...
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Published in: | Journal of crustacean biology 2008-05, Vol.28 (2), p.234-239 |
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container_title | Journal of crustacean biology |
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creator | Tzeng, Tzong-Der Chu, Ta-Jen Wang, Daryi Haung, Hsien-Lu Yeh, Shean-Ya |
description | Abstract
Sequence analyses on the intron from the elongation factor-1α gene were conducted to examine the population structure of sword prawn (Parapenaeopsis hardwickii) in the East China Sea and Taiwan Strait. Five samples including 207 individuals were separately collected from the north of East China Sea (NECS) and waters off Tamsui, Taichung, Putai, and Cheding, and 102 alleles were identified. Despite no phylogeographic structure in alleles, pairwise FST values and analysis of molecular variance (AMOVA) showed significant genetic difference between the NECS and the other four samples. The UPGMA tree of five samples showed two distinct clusters; one included the NECS sample; the other included the rest of samples. The results suggest that two populations exist in the East China Sea and Taiwan Strait. To ensure resource sustainability and maintenance, the sword prawn in the Taiwan Strait and the north of the East China Sea should be treated as two separate populations and then be separately managed in future. Both Tajima's D and Fu and Li's D statistics and analysis of mismatch distribution for overall alleles suggested that sword prawn in studied area had experienced population expansion. |
doi_str_mv | 10.1651/0278-0372(2008)028[0234:PSITSP]2.0.CO;2 |
format | article |
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Sequence analyses on the intron from the elongation factor-1α gene were conducted to examine the population structure of sword prawn (Parapenaeopsis hardwickii) in the East China Sea and Taiwan Strait. Five samples including 207 individuals were separately collected from the north of East China Sea (NECS) and waters off Tamsui, Taichung, Putai, and Cheding, and 102 alleles were identified. Despite no phylogeographic structure in alleles, pairwise FST values and analysis of molecular variance (AMOVA) showed significant genetic difference between the NECS and the other four samples. The UPGMA tree of five samples showed two distinct clusters; one included the NECS sample; the other included the rest of samples. The results suggest that two populations exist in the East China Sea and Taiwan Strait. To ensure resource sustainability and maintenance, the sword prawn in the Taiwan Strait and the north of the East China Sea should be treated as two separate populations and then be separately managed in future. Both Tajima's D and Fu and Li's D statistics and analysis of mismatch distribution for overall alleles suggested that sword prawn in studied area had experienced population expansion.</description><identifier>ISSN: 0278-0372</identifier><identifier>EISSN: 1937-240X</identifier><identifier>DOI: 10.1651/0278-0372(2008)028[0234:PSITSP]2.0.CO;2</identifier><language>eng</language><subject>East China Sea ; Elongation factor-1 gene ; Marine ; Parapenaeopsis hardwickii ; population structure ; Taiwan Strait</subject><ispartof>Journal of crustacean biology, 2008-05, Vol.28 (2), p.234-239</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b485t-ddf9d73926b143e20a3f652f35eda50da57227106a1eebeb6128906c46903ba93</citedby><cites>FETCH-LOGICAL-b485t-ddf9d73926b143e20a3f652f35eda50da57227106a1eebeb6128906c46903ba93</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids></links><search><creatorcontrib>Tzeng, Tzong-Der</creatorcontrib><creatorcontrib>Chu, Ta-Jen</creatorcontrib><creatorcontrib>Wang, Daryi</creatorcontrib><creatorcontrib>Haung, Hsien-Lu</creatorcontrib><creatorcontrib>Yeh, Shean-Ya</creatorcontrib><title>Population Structure in the Sword Prawn (Parapenaeopsis Hardwickii) from the East China Sea and Taiwan Strait Inferred from Intron Sequences</title><title>Journal of crustacean biology</title><addtitle>JCB</addtitle><description>Abstract
Sequence analyses on the intron from the elongation factor-1α gene were conducted to examine the population structure of sword prawn (Parapenaeopsis hardwickii) in the East China Sea and Taiwan Strait. Five samples including 207 individuals were separately collected from the north of East China Sea (NECS) and waters off Tamsui, Taichung, Putai, and Cheding, and 102 alleles were identified. Despite no phylogeographic structure in alleles, pairwise FST values and analysis of molecular variance (AMOVA) showed significant genetic difference between the NECS and the other four samples. The UPGMA tree of five samples showed two distinct clusters; one included the NECS sample; the other included the rest of samples. The results suggest that two populations exist in the East China Sea and Taiwan Strait. To ensure resource sustainability and maintenance, the sword prawn in the Taiwan Strait and the north of the East China Sea should be treated as two separate populations and then be separately managed in future. Both Tajima's D and Fu and Li's D statistics and analysis of mismatch distribution for overall alleles suggested that sword prawn in studied area had experienced population expansion.</description><subject>East China Sea</subject><subject>Elongation factor-1 gene</subject><subject>Marine</subject><subject>Parapenaeopsis hardwickii</subject><subject>population structure</subject><subject>Taiwan Strait</subject><issn>0278-0372</issn><issn>1937-240X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><recordid>eNqVkV2L00AYhQdRsFb_w1zJ7kW685FPvZJu3VYrDaSKIDK8Sd6ws5tOsjMTqv_BH22ykb334mUYOOc5cA4hV5yteBzxKyaSNGAyEReCsfSSifQHEzJ8lxe7Y5H_FCu2Wh_ei2dkwTOZBCJk35-TxZPrJXnl3B1jPBYsW5A_edcPLXjdGVp4O1R-sEi1of4WaXHubE1zC2dDL3Kw0KMB7HqnHd2Crc-6utf6kja2Oz0aNuA8Xd9qA7RAoGBqegR9hkc2aE93pkFrsZ4tO-PtlIsPA5oK3WvyooHW4Zt_75J8_bg5rrfB_nCzW3_YB2WYRj6o6yarE5mJuOShRMFANnEkGhlhDREbLxEi4SwGjlhiGXORZiyuwjhjsoRMLsnbmdvbbox2Xp20q7BtwWA3OCUYF0k0ipfkZhZWtnPOYqN6q09gfyvO1LSGmnpVU69qWmP8TidDNa-hhGJqfVBiJAUzSTuPv54wYO9VnMgkUp8-H9X-y55vr79dq2LUb2Z9aXXbqrtusGas5L9z_wItZ6am</recordid><startdate>200805</startdate><enddate>200805</enddate><creator>Tzeng, Tzong-Der</creator><creator>Chu, Ta-Jen</creator><creator>Wang, Daryi</creator><creator>Haung, Hsien-Lu</creator><creator>Yeh, Shean-Ya</creator><scope>BSCLL</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SN</scope><scope>7ST</scope><scope>7TM</scope><scope>7TN</scope><scope>7U6</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>P64</scope></search><sort><creationdate>200805</creationdate><title>Population Structure in the Sword Prawn (Parapenaeopsis Hardwickii) from the East China Sea and Taiwan Strait Inferred from Intron Sequences</title><author>Tzeng, Tzong-Der ; Chu, Ta-Jen ; Wang, Daryi ; Haung, Hsien-Lu ; Yeh, Shean-Ya</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b485t-ddf9d73926b143e20a3f652f35eda50da57227106a1eebeb6128906c46903ba93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>East China Sea</topic><topic>Elongation factor-1 gene</topic><topic>Marine</topic><topic>Parapenaeopsis hardwickii</topic><topic>population structure</topic><topic>Taiwan Strait</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tzeng, Tzong-Der</creatorcontrib><creatorcontrib>Chu, Ta-Jen</creatorcontrib><creatorcontrib>Wang, Daryi</creatorcontrib><creatorcontrib>Haung, Hsien-Lu</creatorcontrib><creatorcontrib>Yeh, Shean-Ya</creatorcontrib><collection>Istex</collection><collection>CrossRef</collection><collection>Ecology Abstracts</collection><collection>Environment Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Oceanic Abstracts</collection><collection>Sustainability Science Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Journal of crustacean biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tzeng, Tzong-Der</au><au>Chu, Ta-Jen</au><au>Wang, Daryi</au><au>Haung, Hsien-Lu</au><au>Yeh, Shean-Ya</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Population Structure in the Sword Prawn (Parapenaeopsis Hardwickii) from the East China Sea and Taiwan Strait Inferred from Intron Sequences</atitle><jtitle>Journal of crustacean biology</jtitle><addtitle>JCB</addtitle><date>2008-05</date><risdate>2008</risdate><volume>28</volume><issue>2</issue><spage>234</spage><epage>239</epage><pages>234-239</pages><issn>0278-0372</issn><eissn>1937-240X</eissn><abstract>Abstract
Sequence analyses on the intron from the elongation factor-1α gene were conducted to examine the population structure of sword prawn (Parapenaeopsis hardwickii) in the East China Sea and Taiwan Strait. Five samples including 207 individuals were separately collected from the north of East China Sea (NECS) and waters off Tamsui, Taichung, Putai, and Cheding, and 102 alleles were identified. Despite no phylogeographic structure in alleles, pairwise FST values and analysis of molecular variance (AMOVA) showed significant genetic difference between the NECS and the other four samples. The UPGMA tree of five samples showed two distinct clusters; one included the NECS sample; the other included the rest of samples. The results suggest that two populations exist in the East China Sea and Taiwan Strait. To ensure resource sustainability and maintenance, the sword prawn in the Taiwan Strait and the north of the East China Sea should be treated as two separate populations and then be separately managed in future. Both Tajima's D and Fu and Li's D statistics and analysis of mismatch distribution for overall alleles suggested that sword prawn in studied area had experienced population expansion.</abstract><doi>10.1651/0278-0372(2008)028[0234:PSITSP]2.0.CO;2</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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source | JSTOR Archival Journals and Primary Sources Collection【Remote access available】; Oxford Journals Online; Alma/SFX Local Collection |
subjects | East China Sea Elongation factor-1 gene Marine Parapenaeopsis hardwickii population structure Taiwan Strait |
title | Population Structure in the Sword Prawn (Parapenaeopsis Hardwickii) from the East China Sea and Taiwan Strait Inferred from Intron Sequences |
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