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Duodenoscope-Related Outbreak of a Carbapenem-Resistant Klebsiella pneumoniae Identified Using Advanced Molecular Diagnostics
Background. Carbapenem-resistant Klebsiella pneumoniae infections are increasingly prevalent in North American hospitals. We describe an outbreak of carbapenem-resistant K. pneumoniae containing the blaOXA-232 gene transmitted by contaminated duodenoscopes during endoscopic retrograde cholangiopancr...
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Published in: | Clinical infectious diseases 2017-10, Vol.65 (7), p.1159-1166 |
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creator | Humphries, Romney M. Yang, Shuan Kim, Stephen Muthusamy, Venkatara Raman Russell, Dana Trout, Alisa M. Zaroda, Teresa Cheng, Quen J. Aldrovandi, Grace Uslan, Daniel Zachary Hemarajata, Peera Rubin, Zachary Aaron |
description | Background. Carbapenem-resistant Klebsiella pneumoniae infections are increasingly prevalent in North American hospitals. We describe an outbreak of carbapenem-resistant K. pneumoniae containing the blaOXA-232 gene transmitted by contaminated duodenoscopes during endoscopic retrograde cholangiopancreatography (ERCP) procedures. Methods. An outbreak investigation was performed when 9 patients with blaOXA-232 carbapenem-resistant K. pneumoniae infections were identified at a tertiary care hospital. The investigation included 2 case-control studies, review of duodenoscope reprocessing procedures, and culture of devices. Carbapenem-resistant Enterobacteriacieae (CRE) isolates were evaluated with polymerase chain reaction analysis for carbapenemase genes, and isolates with the blaOXA-232 gene were subjected to whole-genome sequencing and chromosome single-nucleotide polymorphism analysis. On recognition of ERCP as a key risk factor for infection, targeted patient notification and CRE screening cultures were performed. Results. Molecular testing ultimately identified 17 patients with blaOxa-232 carbapenem-resistant K. pneumoniae isolates, including 9 with infections, 7 asymptomatic carriers who had undergone ERCP, and 1 additonal patient who had been hospitalized in India and was probably the initial carrier. Two case-control studies established a point-source outbreak associated with 2 specific duodenoscopes. A field investigation of the use, reprocessing, and storage of deuodenoscopes did not identify deviations from US Food and Drug Administration or manufacturer recommendations for reprocessing. Conclusions. This outbreak demonstrated the previously underappreciated potential for duodenoscopes to transmit disease, even after undergoing high-level disinfection according to manufacturers' guidelines. |
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Carbapenem-resistant Klebsiella pneumoniae infections are increasingly prevalent in North American hospitals. We describe an outbreak of carbapenem-resistant K. pneumoniae containing the blaOXA-232 gene transmitted by contaminated duodenoscopes during endoscopic retrograde cholangiopancreatography (ERCP) procedures. Methods. An outbreak investigation was performed when 9 patients with blaOXA-232 carbapenem-resistant K. pneumoniae infections were identified at a tertiary care hospital. The investigation included 2 case-control studies, review of duodenoscope reprocessing procedures, and culture of devices. Carbapenem-resistant Enterobacteriacieae (CRE) isolates were evaluated with polymerase chain reaction analysis for carbapenemase genes, and isolates with the blaOXA-232 gene were subjected to whole-genome sequencing and chromosome single-nucleotide polymorphism analysis. On recognition of ERCP as a key risk factor for infection, targeted patient notification and CRE screening cultures were performed. Results. Molecular testing ultimately identified 17 patients with blaOxa-232 carbapenem-resistant K. pneumoniae isolates, including 9 with infections, 7 asymptomatic carriers who had undergone ERCP, and 1 additonal patient who had been hospitalized in India and was probably the initial carrier. Two case-control studies established a point-source outbreak associated with 2 specific duodenoscopes. A field investigation of the use, reprocessing, and storage of deuodenoscopes did not identify deviations from US Food and Drug Administration or manufacturer recommendations for reprocessing. Conclusions. This outbreak demonstrated the previously underappreciated potential for duodenoscopes to transmit disease, even after undergoing high-level disinfection according to manufacturers' guidelines.</description><identifier>ISSN: 1058-4838</identifier><identifier>EISSN: 1537-6591</identifier><identifier>DOI: 10.1093/cid/cix527</identifier><identifier>PMID: 29579235</identifier><language>eng</language><publisher>United States: Oxford University Press</publisher><subject>Antibiotics ; ARTICLES AND COMMENTARIES ; Carbapenemase ; Disease transmission ; Disinfection ; Drug resistance ; Epidemics ; Gene polymorphism ; Gene sequencing ; Genomes ; Gram-negative bacteria ; Health risks ; Infections ; Klebsiella ; Klebsiella pneumoniae ; Molecules ; Nosocomial infections ; Outbreaks ; Patients ; Polymerase chain reaction ; Polymorphism ; Reprocessing ; Risk factors ; Single-nucleotide polymorphism</subject><ispartof>Clinical infectious diseases, 2017-10, Vol.65 (7), p.1159-1166</ispartof><rights>Copyright © 2017 Oxford University Press on behalf of the Infectious Diseases Society of America</rights><rights>Copyright Oxford University Press, UK Oct 1, 2017</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c373t-4f28d448ac8d73b142df4fe8b599f66c3e4c02e61864b38e016e139fdb20d0e53</citedby><cites>FETCH-LOGICAL-c373t-4f28d448ac8d73b142df4fe8b599f66c3e4c02e61864b38e016e139fdb20d0e53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/26375718$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/26375718$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,58238,58471</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29579235$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Humphries, Romney M.</creatorcontrib><creatorcontrib>Yang, Shuan</creatorcontrib><creatorcontrib>Kim, Stephen</creatorcontrib><creatorcontrib>Muthusamy, Venkatara Raman</creatorcontrib><creatorcontrib>Russell, Dana</creatorcontrib><creatorcontrib>Trout, Alisa M.</creatorcontrib><creatorcontrib>Zaroda, Teresa</creatorcontrib><creatorcontrib>Cheng, Quen J.</creatorcontrib><creatorcontrib>Aldrovandi, Grace</creatorcontrib><creatorcontrib>Uslan, Daniel Zachary</creatorcontrib><creatorcontrib>Hemarajata, Peera</creatorcontrib><creatorcontrib>Rubin, Zachary Aaron</creatorcontrib><title>Duodenoscope-Related Outbreak of a Carbapenem-Resistant Klebsiella pneumoniae Identified Using Advanced Molecular Diagnostics</title><title>Clinical infectious diseases</title><addtitle>Clin Infect Dis</addtitle><description>Background. Carbapenem-resistant Klebsiella pneumoniae infections are increasingly prevalent in North American hospitals. We describe an outbreak of carbapenem-resistant K. pneumoniae containing the blaOXA-232 gene transmitted by contaminated duodenoscopes during endoscopic retrograde cholangiopancreatography (ERCP) procedures. Methods. An outbreak investigation was performed when 9 patients with blaOXA-232 carbapenem-resistant K. pneumoniae infections were identified at a tertiary care hospital. The investigation included 2 case-control studies, review of duodenoscope reprocessing procedures, and culture of devices. Carbapenem-resistant Enterobacteriacieae (CRE) isolates were evaluated with polymerase chain reaction analysis for carbapenemase genes, and isolates with the blaOXA-232 gene were subjected to whole-genome sequencing and chromosome single-nucleotide polymorphism analysis. On recognition of ERCP as a key risk factor for infection, targeted patient notification and CRE screening cultures were performed. Results. Molecular testing ultimately identified 17 patients with blaOxa-232 carbapenem-resistant K. pneumoniae isolates, including 9 with infections, 7 asymptomatic carriers who had undergone ERCP, and 1 additonal patient who had been hospitalized in India and was probably the initial carrier. Two case-control studies established a point-source outbreak associated with 2 specific duodenoscopes. A field investigation of the use, reprocessing, and storage of deuodenoscopes did not identify deviations from US Food and Drug Administration or manufacturer recommendations for reprocessing. Conclusions. This outbreak demonstrated the previously underappreciated potential for duodenoscopes to transmit disease, even after undergoing high-level disinfection according to manufacturers' guidelines.</description><subject>Antibiotics</subject><subject>ARTICLES AND COMMENTARIES</subject><subject>Carbapenemase</subject><subject>Disease transmission</subject><subject>Disinfection</subject><subject>Drug resistance</subject><subject>Epidemics</subject><subject>Gene polymorphism</subject><subject>Gene sequencing</subject><subject>Genomes</subject><subject>Gram-negative bacteria</subject><subject>Health risks</subject><subject>Infections</subject><subject>Klebsiella</subject><subject>Klebsiella pneumoniae</subject><subject>Molecules</subject><subject>Nosocomial infections</subject><subject>Outbreaks</subject><subject>Patients</subject><subject>Polymerase chain reaction</subject><subject>Polymorphism</subject><subject>Reprocessing</subject><subject>Risk factors</subject><subject>Single-nucleotide polymorphism</subject><issn>1058-4838</issn><issn>1537-6591</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNpd0U1rFTEUBuAgiv3QjXsl4EaE0XzOJMtya7VYKYhdD5nkpOQ6k4xJRnThfzflVgUXIQl5eHPgRegZJW8o0fytDa6tH5IND9AxlXzoeqnpw3YmUnVCcXWETkrZE0KpIvIxOmJaDppxeYx-nW_JQUzFphW6zzCbCg5fb3XKYL7i5LHBO5Mns0KEpYESSjWx4o8zTCXAPBu8RtiWFIMBfNmyavChZdyUEG_xmftuom3XT2kGu80m4_NgbtuHNdjyBD3yZi7w9H4_RTcX777sPnRX1-8vd2dXneUDr53wTDkhlLHKDXyigjkvPKhJau373nIQljDoqerFxBUQ2gPl2ruJEUdA8lP06pC75vRtg1LHJRR7N3yEtJWREaqJYEKTRl_-R_dpy7FNN1IthaCac9rU64OyOZWSwY9rDovJP0dKxrtSxlbKeCil4Rf3kdu0gPtL_7TQwPMD2Jea8r_3ng9yoIr_Boxek3w</recordid><startdate>20171001</startdate><enddate>20171001</enddate><creator>Humphries, Romney M.</creator><creator>Yang, Shuan</creator><creator>Kim, Stephen</creator><creator>Muthusamy, Venkatara Raman</creator><creator>Russell, Dana</creator><creator>Trout, Alisa M.</creator><creator>Zaroda, Teresa</creator><creator>Cheng, Quen J.</creator><creator>Aldrovandi, Grace</creator><creator>Uslan, Daniel Zachary</creator><creator>Hemarajata, Peera</creator><creator>Rubin, Zachary Aaron</creator><general>Oxford University Press</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T2</scope><scope>7T7</scope><scope>7U7</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20171001</creationdate><title>Duodenoscope-Related Outbreak of a Carbapenem-Resistant Klebsiella pneumoniae Identified Using Advanced Molecular Diagnostics</title><author>Humphries, Romney M. ; Yang, Shuan ; Kim, Stephen ; Muthusamy, Venkatara Raman ; Russell, Dana ; Trout, Alisa M. ; Zaroda, Teresa ; Cheng, Quen J. ; Aldrovandi, Grace ; Uslan, Daniel Zachary ; Hemarajata, Peera ; Rubin, Zachary Aaron</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c373t-4f28d448ac8d73b142df4fe8b599f66c3e4c02e61864b38e016e139fdb20d0e53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Antibiotics</topic><topic>ARTICLES AND COMMENTARIES</topic><topic>Carbapenemase</topic><topic>Disease transmission</topic><topic>Disinfection</topic><topic>Drug resistance</topic><topic>Epidemics</topic><topic>Gene polymorphism</topic><topic>Gene sequencing</topic><topic>Genomes</topic><topic>Gram-negative bacteria</topic><topic>Health risks</topic><topic>Infections</topic><topic>Klebsiella</topic><topic>Klebsiella pneumoniae</topic><topic>Molecules</topic><topic>Nosocomial infections</topic><topic>Outbreaks</topic><topic>Patients</topic><topic>Polymerase chain reaction</topic><topic>Polymorphism</topic><topic>Reprocessing</topic><topic>Risk factors</topic><topic>Single-nucleotide polymorphism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Humphries, Romney M.</creatorcontrib><creatorcontrib>Yang, Shuan</creatorcontrib><creatorcontrib>Kim, Stephen</creatorcontrib><creatorcontrib>Muthusamy, Venkatara Raman</creatorcontrib><creatorcontrib>Russell, Dana</creatorcontrib><creatorcontrib>Trout, Alisa M.</creatorcontrib><creatorcontrib>Zaroda, Teresa</creatorcontrib><creatorcontrib>Cheng, Quen J.</creatorcontrib><creatorcontrib>Aldrovandi, Grace</creatorcontrib><creatorcontrib>Uslan, Daniel Zachary</creatorcontrib><creatorcontrib>Hemarajata, Peera</creatorcontrib><creatorcontrib>Rubin, Zachary Aaron</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Health and Safety Science Abstracts (Full archive)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Toxicology Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Clinical infectious diseases</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Humphries, Romney M.</au><au>Yang, Shuan</au><au>Kim, Stephen</au><au>Muthusamy, Venkatara Raman</au><au>Russell, Dana</au><au>Trout, Alisa M.</au><au>Zaroda, Teresa</au><au>Cheng, Quen J.</au><au>Aldrovandi, Grace</au><au>Uslan, Daniel Zachary</au><au>Hemarajata, Peera</au><au>Rubin, Zachary Aaron</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Duodenoscope-Related Outbreak of a Carbapenem-Resistant Klebsiella pneumoniae Identified Using Advanced Molecular Diagnostics</atitle><jtitle>Clinical infectious diseases</jtitle><addtitle>Clin Infect Dis</addtitle><date>2017-10-01</date><risdate>2017</risdate><volume>65</volume><issue>7</issue><spage>1159</spage><epage>1166</epage><pages>1159-1166</pages><issn>1058-4838</issn><eissn>1537-6591</eissn><abstract>Background. Carbapenem-resistant Klebsiella pneumoniae infections are increasingly prevalent in North American hospitals. We describe an outbreak of carbapenem-resistant K. pneumoniae containing the blaOXA-232 gene transmitted by contaminated duodenoscopes during endoscopic retrograde cholangiopancreatography (ERCP) procedures. Methods. An outbreak investigation was performed when 9 patients with blaOXA-232 carbapenem-resistant K. pneumoniae infections were identified at a tertiary care hospital. The investigation included 2 case-control studies, review of duodenoscope reprocessing procedures, and culture of devices. Carbapenem-resistant Enterobacteriacieae (CRE) isolates were evaluated with polymerase chain reaction analysis for carbapenemase genes, and isolates with the blaOXA-232 gene were subjected to whole-genome sequencing and chromosome single-nucleotide polymorphism analysis. On recognition of ERCP as a key risk factor for infection, targeted patient notification and CRE screening cultures were performed. Results. Molecular testing ultimately identified 17 patients with blaOxa-232 carbapenem-resistant K. pneumoniae isolates, including 9 with infections, 7 asymptomatic carriers who had undergone ERCP, and 1 additonal patient who had been hospitalized in India and was probably the initial carrier. Two case-control studies established a point-source outbreak associated with 2 specific duodenoscopes. A field investigation of the use, reprocessing, and storage of deuodenoscopes did not identify deviations from US Food and Drug Administration or manufacturer recommendations for reprocessing. Conclusions. This outbreak demonstrated the previously underappreciated potential for duodenoscopes to transmit disease, even after undergoing high-level disinfection according to manufacturers' guidelines.</abstract><cop>United States</cop><pub>Oxford University Press</pub><pmid>29579235</pmid><doi>10.1093/cid/cix527</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Antibiotics ARTICLES AND COMMENTARIES Carbapenemase Disease transmission Disinfection Drug resistance Epidemics Gene polymorphism Gene sequencing Genomes Gram-negative bacteria Health risks Infections Klebsiella Klebsiella pneumoniae Molecules Nosocomial infections Outbreaks Patients Polymerase chain reaction Polymorphism Reprocessing Risk factors Single-nucleotide polymorphism |
title | Duodenoscope-Related Outbreak of a Carbapenem-Resistant Klebsiella pneumoniae Identified Using Advanced Molecular Diagnostics |
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