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Screening of Serum Biomarkers and Establishment of a Decision Tree in Silica-Exposed Populations by Surface-Enhanced Laser Desorption Ionization Time-of-Fly Mass Spectrometry
Objective: To screen for serum biomarkers of silicosis and to study their roles using surface-enhanced laser desorption ionization time-offly mass spectrometry (SELDI-TOF-MS) techniques. Methods: The serum protein/peptide profile on the CM 10 proteinchip was acquired using SELDI-TOF-MS from workers...
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Published in: | Journal of occupational and environmental medicine 2007-07, Vol.49 (7), p.764-770 |
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container_title | Journal of occupational and environmental medicine |
container_volume | 49 |
creator | Wang, Shi-Xin Zhao, Xue-Feng Wei, Mao-Ti Wu, You Zeng, Jia-Wei Liang, Xian-Cai Yi, Jian-Hua He, Bing Tu, Zi-Guang |
description | Objective: To screen for serum biomarkers of silicosis and to study their roles using surface-enhanced laser desorption ionization time-offly mass spectrometry (SELDI-TOF-MS) techniques. Methods: The serum protein/peptide profile on the CM 10 proteinchip was acquired using SELDI-TOF-MS from workers classified by the Chinese national diagnostic standard for pneumoconiosis. Discriminant analysis was performed to establish a decision tree using protein/peptide peaks. Results: Protein/peptide peaks changed much more in silica-exposed populations than they did in the control. Discriminant analysis using Wilks' lambda method could give high sensitivity and specificity in distinguishing the silicaexposed population from the control; the decision tree could give 100% sensitivity and 95 % specificity in distinguishing the silicosis phase among the control group. Conclusions: Special proteins/peptides may change in silica-exposed workers and these changes may be used to distinguish silica-exposed populations from the control with the proper discriminant analytical method. |
doi_str_mv | 10.1097/JOM.0b013e318058aa16 |
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Methods: The serum protein/peptide profile on the CM 10 proteinchip was acquired using SELDI-TOF-MS from workers classified by the Chinese national diagnostic standard for pneumoconiosis. Discriminant analysis was performed to establish a decision tree using protein/peptide peaks. Results: Protein/peptide peaks changed much more in silica-exposed populations than they did in the control. Discriminant analysis using Wilks' lambda method could give high sensitivity and specificity in distinguishing the silicaexposed population from the control; the decision tree could give 100% sensitivity and 95 % specificity in distinguishing the silicosis phase among the control group. Conclusions: Special proteins/peptides may change in silica-exposed workers and these changes may be used to distinguish silica-exposed populations from the control with the proper discriminant analytical method.</description><identifier>ISSN: 1076-2752</identifier><identifier>EISSN: 1536-5948</identifier><identifier>DOI: 10.1097/JOM.0b013e318058aa16</identifier><identifier>PMID: 17622849</identifier><identifier>CODEN: JOEMFM</identifier><language>eng</language><publisher>Hagerstown, MD: Lippincott Williams & Wilkins</publisher><subject>Biological and medical sciences ; Biomarkers - blood ; Chemical and industrial products toxicology. Toxic occupational diseases ; China ; Decision Trees ; Desorption ; Discriminant Analysis ; Human exposure ; Humans ; Inorganic dusts (pneumoconiosises) and organic dusts (byssinosis etc.) ; Male ; Mass Screening ; Medical sciences ; Miscellaneous ; ORIGINAL ARTICLES ; Peptides - analysis ; Peptides - blood ; Radiotherapy. Instrumental treatment. Physiotherapy. Reeducation. Rehabilitation, orthophony, crenotherapy. Diet therapy and various other treatments (general aspects) ; Scientific imaging ; Silica ; Silicosis - blood ; Silicosis - diagnosis ; Silicosis - physiopathology ; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ; Studies ; Toxicology</subject><ispartof>Journal of occupational and environmental medicine, 2007-07, Vol.49 (7), p.764-770</ispartof><rights>Copyright © 2007 American College of Occupational and Environmental Medicine</rights><rights>2007The American College of Occupational and Environmental Medicine</rights><rights>2007 INIST-CNRS</rights><rights>Copyright Lippincott Williams & Wilkins Jul 2007</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3750-39a562c3021fba4c36d2f9358b30a1163a80651f980004fff36d31bc4b6dbe143</citedby><cites>FETCH-LOGICAL-c3750-39a562c3021fba4c36d2f9358b30a1163a80651f980004fff36d31bc4b6dbe143</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/44997530$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/44997530$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,58238,58471</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=18909852$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17622849$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wang, Shi-Xin</creatorcontrib><creatorcontrib>Zhao, Xue-Feng</creatorcontrib><creatorcontrib>Wei, Mao-Ti</creatorcontrib><creatorcontrib>Wu, You</creatorcontrib><creatorcontrib>Zeng, Jia-Wei</creatorcontrib><creatorcontrib>Liang, Xian-Cai</creatorcontrib><creatorcontrib>Yi, Jian-Hua</creatorcontrib><creatorcontrib>He, Bing</creatorcontrib><creatorcontrib>Tu, Zi-Guang</creatorcontrib><title>Screening of Serum Biomarkers and Establishment of a Decision Tree in Silica-Exposed Populations by Surface-Enhanced Laser Desorption Ionization Time-of-Fly Mass Spectrometry</title><title>Journal of occupational and environmental medicine</title><addtitle>J Occup Environ Med</addtitle><description>Objective: To screen for serum biomarkers of silicosis and to study their roles using surface-enhanced laser desorption ionization time-offly mass spectrometry (SELDI-TOF-MS) techniques. Methods: The serum protein/peptide profile on the CM 10 proteinchip was acquired using SELDI-TOF-MS from workers classified by the Chinese national diagnostic standard for pneumoconiosis. Discriminant analysis was performed to establish a decision tree using protein/peptide peaks. Results: Protein/peptide peaks changed much more in silica-exposed populations than they did in the control. Discriminant analysis using Wilks' lambda method could give high sensitivity and specificity in distinguishing the silicaexposed population from the control; the decision tree could give 100% sensitivity and 95 % specificity in distinguishing the silicosis phase among the control group. Conclusions: Special proteins/peptides may change in silica-exposed workers and these changes may be used to distinguish silica-exposed populations from the control with the proper discriminant analytical method.</description><subject>Biological and medical sciences</subject><subject>Biomarkers - blood</subject><subject>Chemical and industrial products toxicology. Toxic occupational diseases</subject><subject>China</subject><subject>Decision Trees</subject><subject>Desorption</subject><subject>Discriminant Analysis</subject><subject>Human exposure</subject><subject>Humans</subject><subject>Inorganic dusts (pneumoconiosises) and organic dusts (byssinosis etc.)</subject><subject>Male</subject><subject>Mass Screening</subject><subject>Medical sciences</subject><subject>Miscellaneous</subject><subject>ORIGINAL ARTICLES</subject><subject>Peptides - analysis</subject><subject>Peptides - blood</subject><subject>Radiotherapy. Instrumental treatment. Physiotherapy. Reeducation. Rehabilitation, orthophony, crenotherapy. Diet therapy and various other treatments (general aspects)</subject><subject>Scientific imaging</subject><subject>Silica</subject><subject>Silicosis - blood</subject><subject>Silicosis - diagnosis</subject><subject>Silicosis - physiopathology</subject><subject>Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization</subject><subject>Studies</subject><subject>Toxicology</subject><issn>1076-2752</issn><issn>1536-5948</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><recordid>eNpdkd-OEyEYxSdG4_7RN1BDTPSO9QMGZuZS166u6WZNWq8nDAVLl4ERZrJbH8pnlNrGJhtCIOF3zkfOKYpXBC4INNWHb7c3F9ABYZqRGngtJRFPilPCmcC8Keun-Q6VwLTi9KQ4S2kDQDgB_rw4IZWgtC6b0-LPQkWtvfU_UTBooePUo0829DLe6ZiQ9Cs0S6PsnE3rXvtxR0n0WSubbPBomcXIerSwziqJZw9DSHqFvodhcnLMRELdFi2maKTSeObX0qv8PpdJx-ySQhx2FLoO3v7-J0BL22scDL5yW3QjU0KLQasxhl6PcfuieGakS_rl4TwvflzNlpdf8fz2y_XlxzlWrOKAWSO5oIoBJaaTpWJiRU3DeN0xkIQIJmsQnJimBoDSGJMBRjpVdmLVaVKy8-L93neI4dek09j2NintnPQ6TKmlwDgjZZPBt4_ATZiiz39rKaEiz6R1hso9pGJIKWrTDtHmiLctgXZXZpvLbB-XmWVvDt5T1-vVUXRoLwPvDoBMSjoTc7o2Hbm6gabm9Dj_Prgx13rnpnsd27WWbly3uwhYJUpMAaq8AHDeBLLs9V62SWOI_23LsmkqzoD9BZ99w1w</recordid><startdate>200707</startdate><enddate>200707</enddate><creator>Wang, Shi-Xin</creator><creator>Zhao, Xue-Feng</creator><creator>Wei, Mao-Ti</creator><creator>Wu, You</creator><creator>Zeng, Jia-Wei</creator><creator>Liang, Xian-Cai</creator><creator>Yi, Jian-Hua</creator><creator>He, Bing</creator><creator>Tu, Zi-Guang</creator><general>Lippincott Williams & Wilkins</general><general>The American College of Occupational and Environmental Medicine</general><general>Lippincott Williams & Wilkins Ovid Technologies</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T2</scope><scope>7U7</scope><scope>7U9</scope><scope>C1K</scope><scope>H94</scope><scope>K9.</scope><scope>7U2</scope></search><sort><creationdate>200707</creationdate><title>Screening of Serum Biomarkers and Establishment of a Decision Tree in Silica-Exposed Populations by Surface-Enhanced Laser Desorption Ionization Time-of-Fly Mass Spectrometry</title><author>Wang, Shi-Xin ; Zhao, Xue-Feng ; Wei, Mao-Ti ; Wu, You ; Zeng, Jia-Wei ; Liang, Xian-Cai ; Yi, Jian-Hua ; He, Bing ; Tu, Zi-Guang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3750-39a562c3021fba4c36d2f9358b30a1163a80651f980004fff36d31bc4b6dbe143</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Biological and medical sciences</topic><topic>Biomarkers - blood</topic><topic>Chemical and industrial products toxicology. Toxic occupational diseases</topic><topic>China</topic><topic>Decision Trees</topic><topic>Desorption</topic><topic>Discriminant Analysis</topic><topic>Human exposure</topic><topic>Humans</topic><topic>Inorganic dusts (pneumoconiosises) and organic dusts (byssinosis etc.)</topic><topic>Male</topic><topic>Mass Screening</topic><topic>Medical sciences</topic><topic>Miscellaneous</topic><topic>ORIGINAL ARTICLES</topic><topic>Peptides - analysis</topic><topic>Peptides - blood</topic><topic>Radiotherapy. Instrumental treatment. Physiotherapy. Reeducation. Rehabilitation, orthophony, crenotherapy. Diet therapy and various other treatments (general aspects)</topic><topic>Scientific imaging</topic><topic>Silica</topic><topic>Silicosis - blood</topic><topic>Silicosis - diagnosis</topic><topic>Silicosis - physiopathology</topic><topic>Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization</topic><topic>Studies</topic><topic>Toxicology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wang, Shi-Xin</creatorcontrib><creatorcontrib>Zhao, Xue-Feng</creatorcontrib><creatorcontrib>Wei, Mao-Ti</creatorcontrib><creatorcontrib>Wu, You</creatorcontrib><creatorcontrib>Zeng, Jia-Wei</creatorcontrib><creatorcontrib>Liang, Xian-Cai</creatorcontrib><creatorcontrib>Yi, Jian-Hua</creatorcontrib><creatorcontrib>He, Bing</creatorcontrib><creatorcontrib>Tu, Zi-Guang</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Health and Safety Science Abstracts (Full archive)</collection><collection>Toxicology Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Safety Science and Risk</collection><jtitle>Journal of occupational and environmental medicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wang, Shi-Xin</au><au>Zhao, Xue-Feng</au><au>Wei, Mao-Ti</au><au>Wu, You</au><au>Zeng, Jia-Wei</au><au>Liang, Xian-Cai</au><au>Yi, Jian-Hua</au><au>He, Bing</au><au>Tu, Zi-Guang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Screening of Serum Biomarkers and Establishment of a Decision Tree in Silica-Exposed Populations by Surface-Enhanced Laser Desorption Ionization Time-of-Fly Mass Spectrometry</atitle><jtitle>Journal of occupational and environmental medicine</jtitle><addtitle>J Occup Environ Med</addtitle><date>2007-07</date><risdate>2007</risdate><volume>49</volume><issue>7</issue><spage>764</spage><epage>770</epage><pages>764-770</pages><issn>1076-2752</issn><eissn>1536-5948</eissn><coden>JOEMFM</coden><abstract>Objective: To screen for serum biomarkers of silicosis and to study their roles using surface-enhanced laser desorption ionization time-offly mass spectrometry (SELDI-TOF-MS) techniques. Methods: The serum protein/peptide profile on the CM 10 proteinchip was acquired using SELDI-TOF-MS from workers classified by the Chinese national diagnostic standard for pneumoconiosis. Discriminant analysis was performed to establish a decision tree using protein/peptide peaks. Results: Protein/peptide peaks changed much more in silica-exposed populations than they did in the control. Discriminant analysis using Wilks' lambda method could give high sensitivity and specificity in distinguishing the silicaexposed population from the control; the decision tree could give 100% sensitivity and 95 % specificity in distinguishing the silicosis phase among the control group. Conclusions: Special proteins/peptides may change in silica-exposed workers and these changes may be used to distinguish silica-exposed populations from the control with the proper discriminant analytical method.</abstract><cop>Hagerstown, MD</cop><pub>Lippincott Williams & Wilkins</pub><pmid>17622849</pmid><doi>10.1097/JOM.0b013e318058aa16</doi><tpages>7</tpages></addata></record> |
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subjects | Biological and medical sciences Biomarkers - blood Chemical and industrial products toxicology. Toxic occupational diseases China Decision Trees Desorption Discriminant Analysis Human exposure Humans Inorganic dusts (pneumoconiosises) and organic dusts (byssinosis etc.) Male Mass Screening Medical sciences Miscellaneous ORIGINAL ARTICLES Peptides - analysis Peptides - blood Radiotherapy. Instrumental treatment. Physiotherapy. Reeducation. Rehabilitation, orthophony, crenotherapy. Diet therapy and various other treatments (general aspects) Scientific imaging Silica Silicosis - blood Silicosis - diagnosis Silicosis - physiopathology Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization Studies Toxicology |
title | Screening of Serum Biomarkers and Establishment of a Decision Tree in Silica-Exposed Populations by Surface-Enhanced Laser Desorption Ionization Time-of-Fly Mass Spectrometry |
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