Loading…

Identification of common virulence factors present in enterotoxigenic Escherichia coli isolated from diarrhoeal patients in Kolkata, India

Aims Development of an effective vaccine against enterotoxigenic Escherichia coli (ETEC) is largely dependent on the conscientious understanding of different virulence associated factors from diverse geographical areas. So, the objective of this study is to elucidate the distribution of enterotoxins...

Full description

Saved in:
Bibliographic Details
Published in:Journal of applied microbiology 2019-01, Vol.126 (1), p.255-265
Main Authors: Bhakat, D., Debnath, A., Naik, R., Chowdhury, G., Deb, A.K., Mukhopadhyay, A.K., Chatterjee, N.S.
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c3530-8b664376069b67a39a814d56c2d7275f6b57f0fa053205d5ea3dd1b630284e073
cites cdi_FETCH-LOGICAL-c3530-8b664376069b67a39a814d56c2d7275f6b57f0fa053205d5ea3dd1b630284e073
container_end_page 265
container_issue 1
container_start_page 255
container_title Journal of applied microbiology
container_volume 126
creator Bhakat, D.
Debnath, A.
Naik, R.
Chowdhury, G.
Deb, A.K.
Mukhopadhyay, A.K.
Chatterjee, N.S.
description Aims Development of an effective vaccine against enterotoxigenic Escherichia coli (ETEC) is largely dependent on the conscientious understanding of different virulence associated factors from diverse geographical areas. So, the objective of this study is to elucidate the distribution of enterotoxins, CF and NCVF in clinical ETEC strains isolated between 2008 and 2014 from two hospitals in Kolkata, India. Methods and Results Multiplex PCR method was used for detection of two enterotoxin genes, 11 common CFs and five common NCVFs. Among the 350 tested ETEC strains, 61% strains possessed est+elt genes, 25% est and 14% elt. Among 56% CF positive ETEC strains, CS21 was the prevalent one (37%) followed by CS6 (36%). NCVF genes were present in 59% of the ETEC strains; eatA was the most prevalent (65%) followed by etpA (51%). There were 29% strains negative for any CFs or NCVFs. Conclusions We conclude that a pattern exists between CS6, eatA and toxins. We observed est with or without elt, CS6 with or without CS5 and with or without eatA were present in 24% of clinical ETEC strains (59/250) analysed. CS21 has emerged as another predominant CF but it had diverse CFs and NCVFs. Significance and Impact of the Study Prevalence of ETEC virulence factors would help in tracking ETEC globally and suggests the need of a multivalent ETEC vaccine.
doi_str_mv 10.1111/jam.14090
format article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_2096558254</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2096558254</sourcerecordid><originalsourceid>FETCH-LOGICAL-c3530-8b664376069b67a39a814d56c2d7275f6b57f0fa053205d5ea3dd1b630284e073</originalsourceid><addsrcrecordid>eNp10c9OFTEUBvDGSACRhS9gmrjRhIH-mbZzl4SgXsC4gXXTaU-9vXam13ZG4RV4agoXXJjYzenid742-RB6R8kxredkbYZj2pIFeYX2KZeiYVKx10_3thFEsT30ppQ1IZQTIXfRHidU8Ar30f3SwTgFH6yZQhpx8timYai33yHPEUYL2Bs7pVzwJkOpGIcR1wE5Tek2_IAxWHxe7ApysKtg6n4MOJQUzQQO-5wG7ILJeZXARLyp79Tt8phymeJPM5kjvByreIt2vIkFDp_nAbr5fH599rW5-v5leXZ61VguOGm6XsqWK0nkopfK8IXpaOuEtMwppoSXvVCeeEMEZ0Q4AYY7R3vJCetaIIofoI_b3E1Ov2Yokx5CsRCjGSHNRTOykEJ0TLSVfviHrtOcx_o7zahQnHWd4lV92iqbUykZvN7kMJh8pynRjwXpWpB-Kqja98-Jcz-A-ytfGqngZAv-hAh3_0_SF6fftpEPRZuazA</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2157328873</pqid></control><display><type>article</type><title>Identification of common virulence factors present in enterotoxigenic Escherichia coli isolated from diarrhoeal patients in Kolkata, India</title><source>Alma/SFX Local Collection</source><creator>Bhakat, D. ; Debnath, A. ; Naik, R. ; Chowdhury, G. ; Deb, A.K. ; Mukhopadhyay, A.K. ; Chatterjee, N.S.</creator><creatorcontrib>Bhakat, D. ; Debnath, A. ; Naik, R. ; Chowdhury, G. ; Deb, A.K. ; Mukhopadhyay, A.K. ; Chatterjee, N.S.</creatorcontrib><description>Aims Development of an effective vaccine against enterotoxigenic Escherichia coli (ETEC) is largely dependent on the conscientious understanding of different virulence associated factors from diverse geographical areas. So, the objective of this study is to elucidate the distribution of enterotoxins, CF and NCVF in clinical ETEC strains isolated between 2008 and 2014 from two hospitals in Kolkata, India. Methods and Results Multiplex PCR method was used for detection of two enterotoxin genes, 11 common CFs and five common NCVFs. Among the 350 tested ETEC strains, 61% strains possessed est+elt genes, 25% est and 14% elt. Among 56% CF positive ETEC strains, CS21 was the prevalent one (37%) followed by CS6 (36%). NCVF genes were present in 59% of the ETEC strains; eatA was the most prevalent (65%) followed by etpA (51%). There were 29% strains negative for any CFs or NCVFs. Conclusions We conclude that a pattern exists between CS6, eatA and toxins. We observed est with or without elt, CS6 with or without CS5 and with or without eatA were present in 24% of clinical ETEC strains (59/250) analysed. CS21 has emerged as another predominant CF but it had diverse CFs and NCVFs. Significance and Impact of the Study Prevalence of ETEC virulence factors would help in tracking ETEC globally and suggests the need of a multivalent ETEC vaccine.</description><identifier>ISSN: 1364-5072</identifier><identifier>EISSN: 1365-2672</identifier><identifier>DOI: 10.1111/jam.14090</identifier><identifier>PMID: 30153365</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Bacteria ; colonization factor ; Diarrhea - microbiology ; diarrhoea ; E coli ; enterotoxigenic Escherichia coli ; Enterotoxigenic Escherichia coli - genetics ; Enterotoxigenic Escherichia coli - pathogenicity ; Enterotoxins ; Escherichia coli ; Escherichia coli Infections - microbiology ; ETEC ; Genes ; Humans ; India ; Multiplex Polymerase Chain Reaction ; nonclassical virulence factor ; Toxins ; vaccine ; Vaccines ; Virulence ; Virulence factors ; Virulence Factors - genetics</subject><ispartof>Journal of applied microbiology, 2019-01, Vol.126 (1), p.255-265</ispartof><rights>2018 The Society for Applied Microbiology</rights><rights>2018 The Society for Applied Microbiology.</rights><rights>Copyright © 2019 The Society for Applied Microbiology</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3530-8b664376069b67a39a814d56c2d7275f6b57f0fa053205d5ea3dd1b630284e073</citedby><cites>FETCH-LOGICAL-c3530-8b664376069b67a39a814d56c2d7275f6b57f0fa053205d5ea3dd1b630284e073</cites><orcidid>0000-0001-7043-0725</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30153365$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bhakat, D.</creatorcontrib><creatorcontrib>Debnath, A.</creatorcontrib><creatorcontrib>Naik, R.</creatorcontrib><creatorcontrib>Chowdhury, G.</creatorcontrib><creatorcontrib>Deb, A.K.</creatorcontrib><creatorcontrib>Mukhopadhyay, A.K.</creatorcontrib><creatorcontrib>Chatterjee, N.S.</creatorcontrib><title>Identification of common virulence factors present in enterotoxigenic Escherichia coli isolated from diarrhoeal patients in Kolkata, India</title><title>Journal of applied microbiology</title><addtitle>J Appl Microbiol</addtitle><description>Aims Development of an effective vaccine against enterotoxigenic Escherichia coli (ETEC) is largely dependent on the conscientious understanding of different virulence associated factors from diverse geographical areas. So, the objective of this study is to elucidate the distribution of enterotoxins, CF and NCVF in clinical ETEC strains isolated between 2008 and 2014 from two hospitals in Kolkata, India. Methods and Results Multiplex PCR method was used for detection of two enterotoxin genes, 11 common CFs and five common NCVFs. Among the 350 tested ETEC strains, 61% strains possessed est+elt genes, 25% est and 14% elt. Among 56% CF positive ETEC strains, CS21 was the prevalent one (37%) followed by CS6 (36%). NCVF genes were present in 59% of the ETEC strains; eatA was the most prevalent (65%) followed by etpA (51%). There were 29% strains negative for any CFs or NCVFs. Conclusions We conclude that a pattern exists between CS6, eatA and toxins. We observed est with or without elt, CS6 with or without CS5 and with or without eatA were present in 24% of clinical ETEC strains (59/250) analysed. CS21 has emerged as another predominant CF but it had diverse CFs and NCVFs. Significance and Impact of the Study Prevalence of ETEC virulence factors would help in tracking ETEC globally and suggests the need of a multivalent ETEC vaccine.</description><subject>Bacteria</subject><subject>colonization factor</subject><subject>Diarrhea - microbiology</subject><subject>diarrhoea</subject><subject>E coli</subject><subject>enterotoxigenic Escherichia coli</subject><subject>Enterotoxigenic Escherichia coli - genetics</subject><subject>Enterotoxigenic Escherichia coli - pathogenicity</subject><subject>Enterotoxins</subject><subject>Escherichia coli</subject><subject>Escherichia coli Infections - microbiology</subject><subject>ETEC</subject><subject>Genes</subject><subject>Humans</subject><subject>India</subject><subject>Multiplex Polymerase Chain Reaction</subject><subject>nonclassical virulence factor</subject><subject>Toxins</subject><subject>vaccine</subject><subject>Vaccines</subject><subject>Virulence</subject><subject>Virulence factors</subject><subject>Virulence Factors - genetics</subject><issn>1364-5072</issn><issn>1365-2672</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNp10c9OFTEUBvDGSACRhS9gmrjRhIH-mbZzl4SgXsC4gXXTaU-9vXam13ZG4RV4agoXXJjYzenid742-RB6R8kxredkbYZj2pIFeYX2KZeiYVKx10_3thFEsT30ppQ1IZQTIXfRHidU8Ar30f3SwTgFH6yZQhpx8timYai33yHPEUYL2Bs7pVzwJkOpGIcR1wE5Tek2_IAxWHxe7ApysKtg6n4MOJQUzQQO-5wG7ILJeZXARLyp79Tt8phymeJPM5kjvByreIt2vIkFDp_nAbr5fH599rW5-v5leXZ61VguOGm6XsqWK0nkopfK8IXpaOuEtMwppoSXvVCeeEMEZ0Q4AYY7R3vJCetaIIofoI_b3E1Ov2Yokx5CsRCjGSHNRTOykEJ0TLSVfviHrtOcx_o7zahQnHWd4lV92iqbUykZvN7kMJh8pynRjwXpWpB-Kqja98-Jcz-A-ytfGqngZAv-hAh3_0_SF6fftpEPRZuazA</recordid><startdate>201901</startdate><enddate>201901</enddate><creator>Bhakat, D.</creator><creator>Debnath, A.</creator><creator>Naik, R.</creator><creator>Chowdhury, G.</creator><creator>Deb, A.K.</creator><creator>Mukhopadhyay, A.K.</creator><creator>Chatterjee, N.S.</creator><general>Oxford University Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7T7</scope><scope>7TM</scope><scope>7U7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-7043-0725</orcidid></search><sort><creationdate>201901</creationdate><title>Identification of common virulence factors present in enterotoxigenic Escherichia coli isolated from diarrhoeal patients in Kolkata, India</title><author>Bhakat, D. ; Debnath, A. ; Naik, R. ; Chowdhury, G. ; Deb, A.K. ; Mukhopadhyay, A.K. ; Chatterjee, N.S.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3530-8b664376069b67a39a814d56c2d7275f6b57f0fa053205d5ea3dd1b630284e073</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Bacteria</topic><topic>colonization factor</topic><topic>Diarrhea - microbiology</topic><topic>diarrhoea</topic><topic>E coli</topic><topic>enterotoxigenic Escherichia coli</topic><topic>Enterotoxigenic Escherichia coli - genetics</topic><topic>Enterotoxigenic Escherichia coli - pathogenicity</topic><topic>Enterotoxins</topic><topic>Escherichia coli</topic><topic>Escherichia coli Infections - microbiology</topic><topic>ETEC</topic><topic>Genes</topic><topic>Humans</topic><topic>India</topic><topic>Multiplex Polymerase Chain Reaction</topic><topic>nonclassical virulence factor</topic><topic>Toxins</topic><topic>vaccine</topic><topic>Vaccines</topic><topic>Virulence</topic><topic>Virulence factors</topic><topic>Virulence Factors - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bhakat, D.</creatorcontrib><creatorcontrib>Debnath, A.</creatorcontrib><creatorcontrib>Naik, R.</creatorcontrib><creatorcontrib>Chowdhury, G.</creatorcontrib><creatorcontrib>Deb, A.K.</creatorcontrib><creatorcontrib>Mukhopadhyay, A.K.</creatorcontrib><creatorcontrib>Chatterjee, N.S.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of applied microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bhakat, D.</au><au>Debnath, A.</au><au>Naik, R.</au><au>Chowdhury, G.</au><au>Deb, A.K.</au><au>Mukhopadhyay, A.K.</au><au>Chatterjee, N.S.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of common virulence factors present in enterotoxigenic Escherichia coli isolated from diarrhoeal patients in Kolkata, India</atitle><jtitle>Journal of applied microbiology</jtitle><addtitle>J Appl Microbiol</addtitle><date>2019-01</date><risdate>2019</risdate><volume>126</volume><issue>1</issue><spage>255</spage><epage>265</epage><pages>255-265</pages><issn>1364-5072</issn><eissn>1365-2672</eissn><abstract>Aims Development of an effective vaccine against enterotoxigenic Escherichia coli (ETEC) is largely dependent on the conscientious understanding of different virulence associated factors from diverse geographical areas. So, the objective of this study is to elucidate the distribution of enterotoxins, CF and NCVF in clinical ETEC strains isolated between 2008 and 2014 from two hospitals in Kolkata, India. Methods and Results Multiplex PCR method was used for detection of two enterotoxin genes, 11 common CFs and five common NCVFs. Among the 350 tested ETEC strains, 61% strains possessed est+elt genes, 25% est and 14% elt. Among 56% CF positive ETEC strains, CS21 was the prevalent one (37%) followed by CS6 (36%). NCVF genes were present in 59% of the ETEC strains; eatA was the most prevalent (65%) followed by etpA (51%). There were 29% strains negative for any CFs or NCVFs. Conclusions We conclude that a pattern exists between CS6, eatA and toxins. We observed est with or without elt, CS6 with or without CS5 and with or without eatA were present in 24% of clinical ETEC strains (59/250) analysed. CS21 has emerged as another predominant CF but it had diverse CFs and NCVFs. Significance and Impact of the Study Prevalence of ETEC virulence factors would help in tracking ETEC globally and suggests the need of a multivalent ETEC vaccine.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>30153365</pmid><doi>10.1111/jam.14090</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0001-7043-0725</orcidid></addata></record>
fulltext fulltext
identifier ISSN: 1364-5072
ispartof Journal of applied microbiology, 2019-01, Vol.126 (1), p.255-265
issn 1364-5072
1365-2672
language eng
recordid cdi_proquest_miscellaneous_2096558254
source Alma/SFX Local Collection
subjects Bacteria
colonization factor
Diarrhea - microbiology
diarrhoea
E coli
enterotoxigenic Escherichia coli
Enterotoxigenic Escherichia coli - genetics
Enterotoxigenic Escherichia coli - pathogenicity
Enterotoxins
Escherichia coli
Escherichia coli Infections - microbiology
ETEC
Genes
Humans
India
Multiplex Polymerase Chain Reaction
nonclassical virulence factor
Toxins
vaccine
Vaccines
Virulence
Virulence factors
Virulence Factors - genetics
title Identification of common virulence factors present in enterotoxigenic Escherichia coli isolated from diarrhoeal patients in Kolkata, India
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-27T21%3A39%3A15IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Identification%20of%20common%20virulence%20factors%20present%20in%20enterotoxigenic%20Escherichia%20coli%20isolated%20from%20diarrhoeal%20patients%20in%20Kolkata,%20India&rft.jtitle=Journal%20of%20applied%20microbiology&rft.au=Bhakat,%20D.&rft.date=2019-01&rft.volume=126&rft.issue=1&rft.spage=255&rft.epage=265&rft.pages=255-265&rft.issn=1364-5072&rft.eissn=1365-2672&rft_id=info:doi/10.1111/jam.14090&rft_dat=%3Cproquest_cross%3E2096558254%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c3530-8b664376069b67a39a814d56c2d7275f6b57f0fa053205d5ea3dd1b630284e073%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2157328873&rft_id=info:pmid/30153365&rfr_iscdi=true