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Identification of common virulence factors present in enterotoxigenic Escherichia coli isolated from diarrhoeal patients in Kolkata, India
Aims Development of an effective vaccine against enterotoxigenic Escherichia coli (ETEC) is largely dependent on the conscientious understanding of different virulence associated factors from diverse geographical areas. So, the objective of this study is to elucidate the distribution of enterotoxins...
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Published in: | Journal of applied microbiology 2019-01, Vol.126 (1), p.255-265 |
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container_title | Journal of applied microbiology |
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creator | Bhakat, D. Debnath, A. Naik, R. Chowdhury, G. Deb, A.K. Mukhopadhyay, A.K. Chatterjee, N.S. |
description | Aims
Development of an effective vaccine against enterotoxigenic Escherichia coli (ETEC) is largely dependent on the conscientious understanding of different virulence associated factors from diverse geographical areas. So, the objective of this study is to elucidate the distribution of enterotoxins, CF and NCVF in clinical ETEC strains isolated between 2008 and 2014 from two hospitals in Kolkata, India.
Methods and Results
Multiplex PCR method was used for detection of two enterotoxin genes, 11 common CFs and five common NCVFs. Among the 350 tested ETEC strains, 61% strains possessed est+elt genes, 25% est and 14% elt. Among 56% CF positive ETEC strains, CS21 was the prevalent one (37%) followed by CS6 (36%). NCVF genes were present in 59% of the ETEC strains; eatA was the most prevalent (65%) followed by etpA (51%). There were 29% strains negative for any CFs or NCVFs.
Conclusions
We conclude that a pattern exists between CS6, eatA and toxins. We observed est with or without elt, CS6 with or without CS5 and with or without eatA were present in 24% of clinical ETEC strains (59/250) analysed. CS21 has emerged as another predominant CF but it had diverse CFs and NCVFs.
Significance and Impact of the Study
Prevalence of ETEC virulence factors would help in tracking ETEC globally and suggests the need of a multivalent ETEC vaccine. |
doi_str_mv | 10.1111/jam.14090 |
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Development of an effective vaccine against enterotoxigenic Escherichia coli (ETEC) is largely dependent on the conscientious understanding of different virulence associated factors from diverse geographical areas. So, the objective of this study is to elucidate the distribution of enterotoxins, CF and NCVF in clinical ETEC strains isolated between 2008 and 2014 from two hospitals in Kolkata, India.
Methods and Results
Multiplex PCR method was used for detection of two enterotoxin genes, 11 common CFs and five common NCVFs. Among the 350 tested ETEC strains, 61% strains possessed est+elt genes, 25% est and 14% elt. Among 56% CF positive ETEC strains, CS21 was the prevalent one (37%) followed by CS6 (36%). NCVF genes were present in 59% of the ETEC strains; eatA was the most prevalent (65%) followed by etpA (51%). There were 29% strains negative for any CFs or NCVFs.
Conclusions
We conclude that a pattern exists between CS6, eatA and toxins. We observed est with or without elt, CS6 with or without CS5 and with or without eatA were present in 24% of clinical ETEC strains (59/250) analysed. CS21 has emerged as another predominant CF but it had diverse CFs and NCVFs.
Significance and Impact of the Study
Prevalence of ETEC virulence factors would help in tracking ETEC globally and suggests the need of a multivalent ETEC vaccine.</description><identifier>ISSN: 1364-5072</identifier><identifier>EISSN: 1365-2672</identifier><identifier>DOI: 10.1111/jam.14090</identifier><identifier>PMID: 30153365</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Bacteria ; colonization factor ; Diarrhea - microbiology ; diarrhoea ; E coli ; enterotoxigenic Escherichia coli ; Enterotoxigenic Escherichia coli - genetics ; Enterotoxigenic Escherichia coli - pathogenicity ; Enterotoxins ; Escherichia coli ; Escherichia coli Infections - microbiology ; ETEC ; Genes ; Humans ; India ; Multiplex Polymerase Chain Reaction ; nonclassical virulence factor ; Toxins ; vaccine ; Vaccines ; Virulence ; Virulence factors ; Virulence Factors - genetics</subject><ispartof>Journal of applied microbiology, 2019-01, Vol.126 (1), p.255-265</ispartof><rights>2018 The Society for Applied Microbiology</rights><rights>2018 The Society for Applied Microbiology.</rights><rights>Copyright © 2019 The Society for Applied Microbiology</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3530-8b664376069b67a39a814d56c2d7275f6b57f0fa053205d5ea3dd1b630284e073</citedby><cites>FETCH-LOGICAL-c3530-8b664376069b67a39a814d56c2d7275f6b57f0fa053205d5ea3dd1b630284e073</cites><orcidid>0000-0001-7043-0725</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30153365$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bhakat, D.</creatorcontrib><creatorcontrib>Debnath, A.</creatorcontrib><creatorcontrib>Naik, R.</creatorcontrib><creatorcontrib>Chowdhury, G.</creatorcontrib><creatorcontrib>Deb, A.K.</creatorcontrib><creatorcontrib>Mukhopadhyay, A.K.</creatorcontrib><creatorcontrib>Chatterjee, N.S.</creatorcontrib><title>Identification of common virulence factors present in enterotoxigenic Escherichia coli isolated from diarrhoeal patients in Kolkata, India</title><title>Journal of applied microbiology</title><addtitle>J Appl Microbiol</addtitle><description>Aims
Development of an effective vaccine against enterotoxigenic Escherichia coli (ETEC) is largely dependent on the conscientious understanding of different virulence associated factors from diverse geographical areas. So, the objective of this study is to elucidate the distribution of enterotoxins, CF and NCVF in clinical ETEC strains isolated between 2008 and 2014 from two hospitals in Kolkata, India.
Methods and Results
Multiplex PCR method was used for detection of two enterotoxin genes, 11 common CFs and five common NCVFs. Among the 350 tested ETEC strains, 61% strains possessed est+elt genes, 25% est and 14% elt. Among 56% CF positive ETEC strains, CS21 was the prevalent one (37%) followed by CS6 (36%). NCVF genes were present in 59% of the ETEC strains; eatA was the most prevalent (65%) followed by etpA (51%). There were 29% strains negative for any CFs or NCVFs.
Conclusions
We conclude that a pattern exists between CS6, eatA and toxins. We observed est with or without elt, CS6 with or without CS5 and with or without eatA were present in 24% of clinical ETEC strains (59/250) analysed. CS21 has emerged as another predominant CF but it had diverse CFs and NCVFs.
Significance and Impact of the Study
Prevalence of ETEC virulence factors would help in tracking ETEC globally and suggests the need of a multivalent ETEC vaccine.</description><subject>Bacteria</subject><subject>colonization factor</subject><subject>Diarrhea - microbiology</subject><subject>diarrhoea</subject><subject>E coli</subject><subject>enterotoxigenic Escherichia coli</subject><subject>Enterotoxigenic Escherichia coli - genetics</subject><subject>Enterotoxigenic Escherichia coli - pathogenicity</subject><subject>Enterotoxins</subject><subject>Escherichia coli</subject><subject>Escherichia coli Infections - microbiology</subject><subject>ETEC</subject><subject>Genes</subject><subject>Humans</subject><subject>India</subject><subject>Multiplex Polymerase Chain Reaction</subject><subject>nonclassical virulence factor</subject><subject>Toxins</subject><subject>vaccine</subject><subject>Vaccines</subject><subject>Virulence</subject><subject>Virulence factors</subject><subject>Virulence Factors - genetics</subject><issn>1364-5072</issn><issn>1365-2672</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNp10c9OFTEUBvDGSACRhS9gmrjRhIH-mbZzl4SgXsC4gXXTaU-9vXam13ZG4RV4agoXXJjYzenid742-RB6R8kxredkbYZj2pIFeYX2KZeiYVKx10_3thFEsT30ppQ1IZQTIXfRHidU8Ar30f3SwTgFH6yZQhpx8timYai33yHPEUYL2Bs7pVzwJkOpGIcR1wE5Tek2_IAxWHxe7ApysKtg6n4MOJQUzQQO-5wG7ILJeZXARLyp79Tt8phymeJPM5kjvByreIt2vIkFDp_nAbr5fH599rW5-v5leXZ61VguOGm6XsqWK0nkopfK8IXpaOuEtMwppoSXvVCeeEMEZ0Q4AYY7R3vJCetaIIofoI_b3E1Ov2Yokx5CsRCjGSHNRTOykEJ0TLSVfviHrtOcx_o7zahQnHWd4lV92iqbUykZvN7kMJh8pynRjwXpWpB-Kqja98-Jcz-A-ytfGqngZAv-hAh3_0_SF6fftpEPRZuazA</recordid><startdate>201901</startdate><enddate>201901</enddate><creator>Bhakat, D.</creator><creator>Debnath, A.</creator><creator>Naik, R.</creator><creator>Chowdhury, G.</creator><creator>Deb, A.K.</creator><creator>Mukhopadhyay, A.K.</creator><creator>Chatterjee, N.S.</creator><general>Oxford University Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7T7</scope><scope>7TM</scope><scope>7U7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-7043-0725</orcidid></search><sort><creationdate>201901</creationdate><title>Identification of common virulence factors present in enterotoxigenic Escherichia coli isolated from diarrhoeal patients in Kolkata, India</title><author>Bhakat, D. ; Debnath, A. ; Naik, R. ; Chowdhury, G. ; Deb, A.K. ; Mukhopadhyay, A.K. ; Chatterjee, N.S.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3530-8b664376069b67a39a814d56c2d7275f6b57f0fa053205d5ea3dd1b630284e073</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Bacteria</topic><topic>colonization factor</topic><topic>Diarrhea - microbiology</topic><topic>diarrhoea</topic><topic>E coli</topic><topic>enterotoxigenic Escherichia coli</topic><topic>Enterotoxigenic Escherichia coli - genetics</topic><topic>Enterotoxigenic Escherichia coli - pathogenicity</topic><topic>Enterotoxins</topic><topic>Escherichia coli</topic><topic>Escherichia coli Infections - microbiology</topic><topic>ETEC</topic><topic>Genes</topic><topic>Humans</topic><topic>India</topic><topic>Multiplex Polymerase Chain Reaction</topic><topic>nonclassical virulence factor</topic><topic>Toxins</topic><topic>vaccine</topic><topic>Vaccines</topic><topic>Virulence</topic><topic>Virulence factors</topic><topic>Virulence Factors - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bhakat, D.</creatorcontrib><creatorcontrib>Debnath, A.</creatorcontrib><creatorcontrib>Naik, R.</creatorcontrib><creatorcontrib>Chowdhury, G.</creatorcontrib><creatorcontrib>Deb, A.K.</creatorcontrib><creatorcontrib>Mukhopadhyay, A.K.</creatorcontrib><creatorcontrib>Chatterjee, N.S.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of applied microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bhakat, D.</au><au>Debnath, A.</au><au>Naik, R.</au><au>Chowdhury, G.</au><au>Deb, A.K.</au><au>Mukhopadhyay, A.K.</au><au>Chatterjee, N.S.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of common virulence factors present in enterotoxigenic Escherichia coli isolated from diarrhoeal patients in Kolkata, India</atitle><jtitle>Journal of applied microbiology</jtitle><addtitle>J Appl Microbiol</addtitle><date>2019-01</date><risdate>2019</risdate><volume>126</volume><issue>1</issue><spage>255</spage><epage>265</epage><pages>255-265</pages><issn>1364-5072</issn><eissn>1365-2672</eissn><abstract>Aims
Development of an effective vaccine against enterotoxigenic Escherichia coli (ETEC) is largely dependent on the conscientious understanding of different virulence associated factors from diverse geographical areas. So, the objective of this study is to elucidate the distribution of enterotoxins, CF and NCVF in clinical ETEC strains isolated between 2008 and 2014 from two hospitals in Kolkata, India.
Methods and Results
Multiplex PCR method was used for detection of two enterotoxin genes, 11 common CFs and five common NCVFs. Among the 350 tested ETEC strains, 61% strains possessed est+elt genes, 25% est and 14% elt. Among 56% CF positive ETEC strains, CS21 was the prevalent one (37%) followed by CS6 (36%). NCVF genes were present in 59% of the ETEC strains; eatA was the most prevalent (65%) followed by etpA (51%). There were 29% strains negative for any CFs or NCVFs.
Conclusions
We conclude that a pattern exists between CS6, eatA and toxins. We observed est with or without elt, CS6 with or without CS5 and with or without eatA were present in 24% of clinical ETEC strains (59/250) analysed. CS21 has emerged as another predominant CF but it had diverse CFs and NCVFs.
Significance and Impact of the Study
Prevalence of ETEC virulence factors would help in tracking ETEC globally and suggests the need of a multivalent ETEC vaccine.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>30153365</pmid><doi>10.1111/jam.14090</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0001-7043-0725</orcidid></addata></record> |
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subjects | Bacteria colonization factor Diarrhea - microbiology diarrhoea E coli enterotoxigenic Escherichia coli Enterotoxigenic Escherichia coli - genetics Enterotoxigenic Escherichia coli - pathogenicity Enterotoxins Escherichia coli Escherichia coli Infections - microbiology ETEC Genes Humans India Multiplex Polymerase Chain Reaction nonclassical virulence factor Toxins vaccine Vaccines Virulence Virulence factors Virulence Factors - genetics |
title | Identification of common virulence factors present in enterotoxigenic Escherichia coli isolated from diarrhoeal patients in Kolkata, India |
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