Recurrent EP300-BCOR Fusions in Pediatric Gliomas With Distinct Clinicopathologic Features

Abstract BCOR is an epigenetic regulator and is genetically altered by mutation, deletion, or gene fusion in a range of cancers. “Central nervous system high-grade neuroepithelial tumor with BCOR alteration” is a recently described entity with characteristic internal tandem duplications within exon...

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Bibliographic Details
Published in:Journal of neuropathology and experimental neurology 2019-04, Vol.78 (4), p.305-314
Main Authors: Torre, Matthew, Meredith, David M, Dubuc, Adrian, Solomon, David A, Perry, Arie, Vasudevaraja, Varshini, Serrano, Jonathan, Snuderl, Matija, Ligon, Keith L, Alexandrescu, Sanda
Format: Article
Language:English
Subjects:
Brain cancer
Case studies
Deoxyribonucleic acid
Diagnosis
DNA
DNA methylation
Exons (Molecular genetics)
Genetic aspects
Genomes
Glioma
Gliomas
Leukemia
Mutation
Nervous system
Pathology
Patients
Pediatric research
Pediatric tumors
Pediatrics
Tumors
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Summary:Abstract BCOR is an epigenetic regulator and is genetically altered by mutation, deletion, or gene fusion in a range of cancers. “Central nervous system high-grade neuroepithelial tumor with BCOR alteration” is a recently described entity with characteristic internal tandem duplications within exon 15 of the BCOR gene (hereafter: CNS HGNET-BCOR ex15 ITD). In this case series of 3 patients, we report the clinicopathologic, molecular, and methylome features of gliomas with novel EP300-BCOR in-frame gene fusions, thus expanding the spectrum of BCOR alterations seen in CNS tumors. The gliomas in this series arise in children (ages 10–18), involve the supratentorial compartment, and have an infiltrative pattern of growth and a myxoid/microcystic background with frequent psammomatous calcifications and prominent chicken-wire vessels. All 3 cases had areas with low-grade morphology and 2 of them demonstrated histologic high-grade transformation. In contrast to CNS HGNET-BCOR ex15 ITD, they lack perivascular pseudorosettes. On a t-Distributed Stochastic Neighbor Embedding plot they cluster perfectly together, away from CNS HGNET-BCOR ex15ITD, consistent with a different entity. Gliomas with EP300-BCOR fusions and high-grade histology can demonstrate relatively rapid regrowth after debulking or subtotal resection.
ISSN:0022-3069
1554-6578
DOI:10.1093/jnen/nlz011