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Diagnosis of post-surgical fine-needle aspiration biopsies of thyroid lesions with indeterminate cytology using HRMAS NMR-based metabolomics
Introduction Ultrasound examination coupled with fine-needle aspiration (FNA) cytology is the gold standard for the diagnosis of thyroid cancer. However, about 10–40% of these analyses cannot be conclusive on the malignancy of the lesions and lead to surgery. The cytological indeterminate FNA biopsi...
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Published in: | Metabolomics 2018-10, Vol.14 (10), p.141-10, Article 141 |
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description | Introduction
Ultrasound examination coupled with fine-needle aspiration (FNA) cytology is the gold standard for the diagnosis of thyroid cancer. However, about 10–40% of these analyses cannot be conclusive on the malignancy of the lesions and lead to surgery. The cytological indeterminate FNA biopsies are mainly constituted of follicular—patterned lesions, which are benign in 80% of the cases.
Objectives
The development of a FNAB classification approach based on the metabolic phenotype of the lesions, complementary to cytology and other molecular tests in order to limit the number of patients undergoing unnecessary thyroidectomy.
Methods
We explored the potential of a NMR-based metabolomics approach to improve the quality of the diagnosis from FNABs, using thyroid tissues collected post-surgically.
Results
The NMR-detected metabolites were used to produce a robust OPLSDA model to discriminate between benign and malignant tumours. Malignancy was correlated with amino acids such as tyrosine, serine, alanine, leucine and phenylalanine and anti-correlated with myo-inositol, scyllo-inositol and citrate. Diagnosis accuracy was of 84.8% when only indeterminate lesions were considered.
Conclusion
These results on model FNAB indicate that there is a clear interest in exploring the possibility to export NMR metabolomics to pre-surgical diagnostics. |
doi_str_mv | 10.1007/s11306-018-1437-6 |
format | article |
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Ultrasound examination coupled with fine-needle aspiration (FNA) cytology is the gold standard for the diagnosis of thyroid cancer. However, about 10–40% of these analyses cannot be conclusive on the malignancy of the lesions and lead to surgery. The cytological indeterminate FNA biopsies are mainly constituted of follicular—patterned lesions, which are benign in 80% of the cases.
Objectives
The development of a FNAB classification approach based on the metabolic phenotype of the lesions, complementary to cytology and other molecular tests in order to limit the number of patients undergoing unnecessary thyroidectomy.
Methods
We explored the potential of a NMR-based metabolomics approach to improve the quality of the diagnosis from FNABs, using thyroid tissues collected post-surgically.
Results
The NMR-detected metabolites were used to produce a robust OPLSDA model to discriminate between benign and malignant tumours. Malignancy was correlated with amino acids such as tyrosine, serine, alanine, leucine and phenylalanine and anti-correlated with myo-inositol, scyllo-inositol and citrate. Diagnosis accuracy was of 84.8% when only indeterminate lesions were considered.
Conclusion
These results on model FNAB indicate that there is a clear interest in exploring the possibility to export NMR metabolomics to pre-surgical diagnostics.</description><identifier>ISSN: 1573-3882</identifier><identifier>EISSN: 1573-3890</identifier><identifier>DOI: 10.1007/s11306-018-1437-6</identifier><identifier>PMID: 30830426</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Alanine ; Benign ; Biochemistry ; Biomedical and Life Sciences ; Biomedicine ; Biopsy ; Biopsy, Fine-Needle ; Cell Biology ; Cellular biology ; Citric acid ; Cytology ; Developmental Biology ; Diagnosis ; Female ; Humans ; Inositol ; Leucine ; Life Sciences ; Male ; Malignancy ; Metabolites ; Metabolomics ; Molecular Medicine ; Multivariate Analysis ; NMR ; Nuclear magnetic resonance ; Nuclear Magnetic Resonance, Biomolecular ; Original Article ; Phenotypes ; Phenylalanine ; Serine ; Surgery ; Thyroid cancer ; Thyroid gland ; Thyroid Neoplasms - diagnosis ; Thyroid Neoplasms - metabolism ; Thyroid Neoplasms - surgery ; Thyroid Nodule - diagnosis ; Thyroid Nodule - metabolism ; Thyroid Nodule - surgery ; Thyroidectomy ; Tumors ; Tyrosine ; Ultrasound</subject><ispartof>Metabolomics, 2018-10, Vol.14 (10), p.141-10, Article 141</ispartof><rights>Springer Science+Business Media, LLC, part of Springer Nature 2018</rights><rights>Metabolomics is a copyright of Springer, (2018). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c372t-a928cc9c31e08d224e9c99765fe79d6f52fab02c3424d7c6c40aff11d9d9ee083</citedby><cites>FETCH-LOGICAL-c372t-a928cc9c31e08d224e9c99765fe79d6f52fab02c3424d7c6c40aff11d9d9ee083</cites><orcidid>0000-0003-2730-121X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30830426$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Rezig, Lamya</creatorcontrib><creatorcontrib>Servadio, Adele</creatorcontrib><creatorcontrib>Torregrossa, Liborio</creatorcontrib><creatorcontrib>Miccoli, Paolo</creatorcontrib><creatorcontrib>Basolo, Fulvio</creatorcontrib><creatorcontrib>Shintu, Laetitia</creatorcontrib><creatorcontrib>Caldarelli, Stefano</creatorcontrib><title>Diagnosis of post-surgical fine-needle aspiration biopsies of thyroid lesions with indeterminate cytology using HRMAS NMR-based metabolomics</title><title>Metabolomics</title><addtitle>Metabolomics</addtitle><addtitle>Metabolomics</addtitle><description>Introduction
Ultrasound examination coupled with fine-needle aspiration (FNA) cytology is the gold standard for the diagnosis of thyroid cancer. However, about 10–40% of these analyses cannot be conclusive on the malignancy of the lesions and lead to surgery. The cytological indeterminate FNA biopsies are mainly constituted of follicular—patterned lesions, which are benign in 80% of the cases.
Objectives
The development of a FNAB classification approach based on the metabolic phenotype of the lesions, complementary to cytology and other molecular tests in order to limit the number of patients undergoing unnecessary thyroidectomy.
Methods
We explored the potential of a NMR-based metabolomics approach to improve the quality of the diagnosis from FNABs, using thyroid tissues collected post-surgically.
Results
The NMR-detected metabolites were used to produce a robust OPLSDA model to discriminate between benign and malignant tumours. Malignancy was correlated with amino acids such as tyrosine, serine, alanine, leucine and phenylalanine and anti-correlated with myo-inositol, scyllo-inositol and citrate. Diagnosis accuracy was of 84.8% when only indeterminate lesions were considered.
Conclusion
These results on model FNAB indicate that there is a clear interest in exploring the possibility to export NMR metabolomics to pre-surgical diagnostics.</description><subject>Alanine</subject><subject>Benign</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Biopsy</subject><subject>Biopsy, Fine-Needle</subject><subject>Cell Biology</subject><subject>Cellular biology</subject><subject>Citric acid</subject><subject>Cytology</subject><subject>Developmental Biology</subject><subject>Diagnosis</subject><subject>Female</subject><subject>Humans</subject><subject>Inositol</subject><subject>Leucine</subject><subject>Life Sciences</subject><subject>Male</subject><subject>Malignancy</subject><subject>Metabolites</subject><subject>Metabolomics</subject><subject>Molecular Medicine</subject><subject>Multivariate Analysis</subject><subject>NMR</subject><subject>Nuclear magnetic resonance</subject><subject>Nuclear Magnetic Resonance, Biomolecular</subject><subject>Original Article</subject><subject>Phenotypes</subject><subject>Phenylalanine</subject><subject>Serine</subject><subject>Surgery</subject><subject>Thyroid cancer</subject><subject>Thyroid gland</subject><subject>Thyroid Neoplasms - diagnosis</subject><subject>Thyroid Neoplasms - metabolism</subject><subject>Thyroid Neoplasms - surgery</subject><subject>Thyroid Nodule - diagnosis</subject><subject>Thyroid Nodule - metabolism</subject><subject>Thyroid Nodule - surgery</subject><subject>Thyroidectomy</subject><subject>Tumors</subject><subject>Tyrosine</subject><subject>Ultrasound</subject><issn>1573-3882</issn><issn>1573-3890</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNp1kV9r1jAUh4sobk4_gDcS8MabaP60TXM5pm7CpjD1uqTJSZfRJjUnRd7v4IdeX985QfDqBM7z-53AU1UvOXvLGVPvkHPJWsp4R3ktFW0fVce8UZLKTrPHD-9OHFXPEG8Zq2ut2NPqSLJOslq0x9Wv98GMMWFAkjxZEhaKax6DNRPxIQKNAG4CYnAJ2ZSQIhlCWjDA70C52eUUHJkAtxWSn6HckBAdFMhziKYAsbuSpjTuyIohjuTi-ur0K_l8dU0Hg-DIDMUMGzAHi8-rJ95MCC_u50n1_eOHb2cX9PLL-aez00tqpRKFGi06a7WVHFjnhKhBW61V23hQ2rW-Ed4MTFhZi9op29qaGe85d9pp2CLypHpz6F1y-rECln4OaGGaTIS0Yi94p3TT1U27oa__QW_TmuP2u43iSvGWqz3FD5TNCTGD75ccZpN3PWf9XlV_UNVvqvq9qn6feXXfvA4zuIfEHzcbIA4Abqs4Qv57-v-tdyouoO8</recordid><startdate>20181001</startdate><enddate>20181001</enddate><creator>Rezig, Lamya</creator><creator>Servadio, Adele</creator><creator>Torregrossa, Liborio</creator><creator>Miccoli, Paolo</creator><creator>Basolo, Fulvio</creator><creator>Shintu, Laetitia</creator><creator>Caldarelli, Stefano</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-2730-121X</orcidid></search><sort><creationdate>20181001</creationdate><title>Diagnosis of post-surgical fine-needle aspiration biopsies of thyroid lesions with indeterminate cytology using HRMAS NMR-based metabolomics</title><author>Rezig, Lamya ; Servadio, Adele ; Torregrossa, Liborio ; Miccoli, Paolo ; Basolo, Fulvio ; Shintu, Laetitia ; Caldarelli, Stefano</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c372t-a928cc9c31e08d224e9c99765fe79d6f52fab02c3424d7c6c40aff11d9d9ee083</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Alanine</topic><topic>Benign</topic><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Biopsy</topic><topic>Biopsy, Fine-Needle</topic><topic>Cell Biology</topic><topic>Cellular biology</topic><topic>Citric acid</topic><topic>Cytology</topic><topic>Developmental Biology</topic><topic>Diagnosis</topic><topic>Female</topic><topic>Humans</topic><topic>Inositol</topic><topic>Leucine</topic><topic>Life Sciences</topic><topic>Male</topic><topic>Malignancy</topic><topic>Metabolites</topic><topic>Metabolomics</topic><topic>Molecular Medicine</topic><topic>Multivariate Analysis</topic><topic>NMR</topic><topic>Nuclear magnetic resonance</topic><topic>Nuclear Magnetic Resonance, Biomolecular</topic><topic>Original Article</topic><topic>Phenotypes</topic><topic>Phenylalanine</topic><topic>Serine</topic><topic>Surgery</topic><topic>Thyroid cancer</topic><topic>Thyroid gland</topic><topic>Thyroid Neoplasms - diagnosis</topic><topic>Thyroid Neoplasms - metabolism</topic><topic>Thyroid Neoplasms - surgery</topic><topic>Thyroid Nodule - diagnosis</topic><topic>Thyroid Nodule - metabolism</topic><topic>Thyroid Nodule - surgery</topic><topic>Thyroidectomy</topic><topic>Tumors</topic><topic>Tyrosine</topic><topic>Ultrasound</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Rezig, Lamya</creatorcontrib><creatorcontrib>Servadio, Adele</creatorcontrib><creatorcontrib>Torregrossa, Liborio</creatorcontrib><creatorcontrib>Miccoli, Paolo</creatorcontrib><creatorcontrib>Basolo, Fulvio</creatorcontrib><creatorcontrib>Shintu, Laetitia</creatorcontrib><creatorcontrib>Caldarelli, Stefano</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest_Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection (Proquest) (PQ_SDU_P3)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>ProQuest Biological Science Journals</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><jtitle>Metabolomics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rezig, Lamya</au><au>Servadio, Adele</au><au>Torregrossa, Liborio</au><au>Miccoli, Paolo</au><au>Basolo, Fulvio</au><au>Shintu, Laetitia</au><au>Caldarelli, Stefano</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Diagnosis of post-surgical fine-needle aspiration biopsies of thyroid lesions with indeterminate cytology using HRMAS NMR-based metabolomics</atitle><jtitle>Metabolomics</jtitle><stitle>Metabolomics</stitle><addtitle>Metabolomics</addtitle><date>2018-10-01</date><risdate>2018</risdate><volume>14</volume><issue>10</issue><spage>141</spage><epage>10</epage><pages>141-10</pages><artnum>141</artnum><issn>1573-3882</issn><eissn>1573-3890</eissn><abstract>Introduction
Ultrasound examination coupled with fine-needle aspiration (FNA) cytology is the gold standard for the diagnosis of thyroid cancer. However, about 10–40% of these analyses cannot be conclusive on the malignancy of the lesions and lead to surgery. The cytological indeterminate FNA biopsies are mainly constituted of follicular—patterned lesions, which are benign in 80% of the cases.
Objectives
The development of a FNAB classification approach based on the metabolic phenotype of the lesions, complementary to cytology and other molecular tests in order to limit the number of patients undergoing unnecessary thyroidectomy.
Methods
We explored the potential of a NMR-based metabolomics approach to improve the quality of the diagnosis from FNABs, using thyroid tissues collected post-surgically.
Results
The NMR-detected metabolites were used to produce a robust OPLSDA model to discriminate between benign and malignant tumours. Malignancy was correlated with amino acids such as tyrosine, serine, alanine, leucine and phenylalanine and anti-correlated with myo-inositol, scyllo-inositol and citrate. Diagnosis accuracy was of 84.8% when only indeterminate lesions were considered.
Conclusion
These results on model FNAB indicate that there is a clear interest in exploring the possibility to export NMR metabolomics to pre-surgical diagnostics.</abstract><cop>New York</cop><pub>Springer US</pub><pmid>30830426</pmid><doi>10.1007/s11306-018-1437-6</doi><tpages>10</tpages><orcidid>https://orcid.org/0000-0003-2730-121X</orcidid></addata></record> |
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subjects | Alanine Benign Biochemistry Biomedical and Life Sciences Biomedicine Biopsy Biopsy, Fine-Needle Cell Biology Cellular biology Citric acid Cytology Developmental Biology Diagnosis Female Humans Inositol Leucine Life Sciences Male Malignancy Metabolites Metabolomics Molecular Medicine Multivariate Analysis NMR Nuclear magnetic resonance Nuclear Magnetic Resonance, Biomolecular Original Article Phenotypes Phenylalanine Serine Surgery Thyroid cancer Thyroid gland Thyroid Neoplasms - diagnosis Thyroid Neoplasms - metabolism Thyroid Neoplasms - surgery Thyroid Nodule - diagnosis Thyroid Nodule - metabolism Thyroid Nodule - surgery Thyroidectomy Tumors Tyrosine Ultrasound |
title | Diagnosis of post-surgical fine-needle aspiration biopsies of thyroid lesions with indeterminate cytology using HRMAS NMR-based metabolomics |
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