Chromosome engineering of the TCA cycle in Halomonas bluephagenesis for production of copolymers of 3-hydroxybutyrate and 3-hydroxyvalerate (PHBV)

• Published in: Metabolic engineering 2019-07, Vol.54, p.69-82
• Main Authors: Chen, Yong, Chen, Xin-Yu, Du, He-Tong, Zhang, Xu, Ma, Yi-Ming, Chen, Jin-Chun, Ye, Jian-Wen, Jiang, Xiao-Ran, Chen, Guo-Qiang
• Format: Article
• Language: English
• Subjects: 3-Hydroxybutyric Acid - genetics; 3-Hydroxybutyric Acid - metabolism; 3-Hydroxyvalerate; Bioplastics; Chromosome engineering; Chromosomes, Bacterial - genetics; Chromosomes, Bacterial - metabolism; Citric Acid Cycle - genetics; Genetic Engineering; Halomonas - genetics; Halomonas - metabolism; Halomonas bluephagenesis; Metabolic engineering; Next generation industrial biotechnology; Pentanoic Acids - metabolism; PHBV; Polyesters - metabolism; Synthetic biology
• ISSN: 1096-7176; 1096-7184
• DOI: 10.1016/j.ymben.2019.03.006

Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV) is a promising biopolyester with good mechanical properties and biodegradability. Large-scale production of PHBV is still hindered by the high production cost. CRISPR/Cas9 method was used to engineer the TCA cycle in Halomonas bluephagenesis on its chromosome for production of PHBV from glucose as a sole carbon source. Two TCA cycle related genes sdhE and icl encoding succinate dehydrogenase assembly factor 2 and isocitrate lysase were deleted, respectively, in H. bluephagenesis TD08AB containing PHBV synthesis genes on the chromosome, to channel more flux to increase the 3-hydroxyvalerate (3HV) ratio of PHBV. Due to a poor growth behavior of the mutant strains, H. bluephagenesis TY194 equipped with a medium strength Pporin-194 promoter was selected for further studies. The sdhE and/or icl mutant strains of H. bluephagenesis TY194 were constructed to show enhanced cell growth, PHBV synthesis and 3HV molar ratio. Gluconate was used to activate ED pathway and thus TCA cycle to increase 3HV content. H. bluephagenesis TY194 (ΔsdhEΔicl) was found to synthesize 17mol% 3HV in PHBV. Supported by the synergetic function of phosphoenolpyruvate carboxylase and Vitreoscilla hemoglobin encoded by genes ppc and vgb inserted into the chromosome of H. bluephagenesis TY194 (ΔsdhE) serving to enhance TCA cycle activity, a series of strains were generated that could produce PHBV containing 3–18mol% 3HV using glucose as a sole carbon source. Shake flask studies showed that H. bluephagenesis TY194 (ΔsdhE, G7::Pporin-ppc) produced 6.3 g/L cell dry weight (CDW), 65% PHBV in CDW and 25mol% 3HV in PHBV when grown in glucose and gluconate. 25mol% 3HV was the highest reported via chromosomal expression system. PHBV copolymers with different 3HV molar ratios were extracted and characterized. Next-generation industrial biotechnology (NGIB) based on recombinant H. bluephagenesis grown under unsterile and continuous conditions, allows production of P(3HB-0∼25mol% 3HV) in a convenient way with reduced production complexity and cost. •Deletion on two TCA cycle related genes sdhE and icl of H. bluephagenesis channels flux to 3HV synthesis.•Promoter engineering was conducted to control 3HV synthesis operon to construct a better performance strain.•Gluconate was used to regulate NADH/NAD+ to improve TCA cycle activity for enhanced 3HV synthesis.•Chromosomal expression of ppc and vgb in recombinant strain grown on glucose led to formation of