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Rapid Solution-Phase Hydrogen/Deuterium Exchange for Metabolite Compound Identification
Rapid, solution-phase hydrogen/deuterium exchange (HDX) coupled with mass spectrometry (MS) is demonstrated as a means for distinguishing small-molecule metabolites. HDX is achieved using capillary vibrating sharp-edge spray ionization (cVSSI) to allow sufficient time for reagent mixing and exchange...
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Published in: | Journal of the American Society for Mass Spectrometry 2019-06, Vol.30 (6), p.1102-1114 |
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container_title | Journal of the American Society for Mass Spectrometry |
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creator | Majuta, Sandra N. Li, Chong Jayasundara, Kinkini Kiani Karanji, Ahmad Attanayake, Kushani Ranganathan, Nandhini Li, Peng Valentine, Stephen J. |
description | Rapid, solution-phase hydrogen/deuterium exchange (HDX) coupled with mass spectrometry (MS) is demonstrated as a means for distinguishing small-molecule metabolites. HDX is achieved using capillary vibrating sharp-edge spray ionization (cVSSI) to allow sufficient time for reagent mixing and exchange in micrometer-sized droplets. Different compounds are observed to incorporate deuterium with varying efficiencies resulting in unique isotopic patterns as revealed in the MS spectra. Using linear regression techniques, parameters representing contribution to exchange by different hydrogen types can be computed. In this proof-of-concept study, the exchange parameters are shown to be useful in the retrodiction of the amount of deuterium incorporated within different compounds. On average, the exchange parameters retrodict the exchange level with ~ 2.2-fold greater accuracy than treating all exchangeable hydrogens equally. The parameters can be used to produce hypothetical isotopic distributions that agree (± 16% RMSD) with experimental measurements. These initial studies are discussed in light of their potential value for identifying challenging metabolite species. |
doi_str_mv | 10.1007/s13361-019-02163-0 |
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HDX is achieved using capillary vibrating sharp-edge spray ionization (cVSSI) to allow sufficient time for reagent mixing and exchange in micrometer-sized droplets. Different compounds are observed to incorporate deuterium with varying efficiencies resulting in unique isotopic patterns as revealed in the MS spectra. Using linear regression techniques, parameters representing contribution to exchange by different hydrogen types can be computed. In this proof-of-concept study, the exchange parameters are shown to be useful in the retrodiction of the amount of deuterium incorporated within different compounds. On average, the exchange parameters retrodict the exchange level with ~ 2.2-fold greater accuracy than treating all exchangeable hydrogens equally. The parameters can be used to produce hypothetical isotopic distributions that agree (± 16% RMSD) with experimental measurements. These initial studies are discussed in light of their potential value for identifying challenging metabolite species.</description><identifier>ISSN: 1044-0305</identifier><identifier>EISSN: 1879-1123</identifier><identifier>DOI: 10.1007/s13361-019-02163-0</identifier><identifier>PMID: 30980382</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Analytical Chemistry ; Bioinformatics ; Biotechnology ; Chemistry ; Chemistry and Materials Science ; Deuterium ; Deuterium - chemistry ; Deuterium Exchange Measurement - economics ; Deuterium Exchange Measurement - instrumentation ; Equipment Design ; Exchanging ; Focus: Ion Mobility Spectrometry (IMS): Research Article ; Hydrogen ; Hydrogen - chemistry ; Ionization ; Mass spectrometry ; Mass Spectrometry - economics ; Mass Spectrometry - instrumentation ; Metabolites ; Metabolomics - economics ; Metabolomics - instrumentation ; Organic Chemistry ; Parameters ; Proteomics ; Reagents ; Time Factors</subject><ispartof>Journal of the American Society for Mass Spectrometry, 2019-06, Vol.30 (6), p.1102-1114</ispartof><rights>American Society for Mass Spectrometry 2019</rights><rights>Journal of The American Society for Mass Spectrometry is a copyright of Springer, (2019). All Rights Reserved.</rights><rights>American Society for Mass Spectrometry 2019.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c403t-eeeb38642324bc884d83b38ef4a1ac68ae5554dabc21f0cadee49534018c7ef93</citedby><cites>FETCH-LOGICAL-c403t-eeeb38642324bc884d83b38ef4a1ac68ae5554dabc21f0cadee49534018c7ef93</cites><orcidid>0000-0003-4360-2928</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30980382$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Majuta, Sandra N.</creatorcontrib><creatorcontrib>Li, Chong</creatorcontrib><creatorcontrib>Jayasundara, Kinkini</creatorcontrib><creatorcontrib>Kiani Karanji, Ahmad</creatorcontrib><creatorcontrib>Attanayake, Kushani</creatorcontrib><creatorcontrib>Ranganathan, Nandhini</creatorcontrib><creatorcontrib>Li, Peng</creatorcontrib><creatorcontrib>Valentine, Stephen J.</creatorcontrib><title>Rapid Solution-Phase Hydrogen/Deuterium Exchange for Metabolite Compound Identification</title><title>Journal of the American Society for Mass Spectrometry</title><addtitle>J. Am. Soc. Mass Spectrom</addtitle><addtitle>J Am Soc Mass Spectrom</addtitle><description>Rapid, solution-phase hydrogen/deuterium exchange (HDX) coupled with mass spectrometry (MS) is demonstrated as a means for distinguishing small-molecule metabolites. HDX is achieved using capillary vibrating sharp-edge spray ionization (cVSSI) to allow sufficient time for reagent mixing and exchange in micrometer-sized droplets. Different compounds are observed to incorporate deuterium with varying efficiencies resulting in unique isotopic patterns as revealed in the MS spectra. Using linear regression techniques, parameters representing contribution to exchange by different hydrogen types can be computed. In this proof-of-concept study, the exchange parameters are shown to be useful in the retrodiction of the amount of deuterium incorporated within different compounds. On average, the exchange parameters retrodict the exchange level with ~ 2.2-fold greater accuracy than treating all exchangeable hydrogens equally. The parameters can be used to produce hypothetical isotopic distributions that agree (± 16% RMSD) with experimental measurements. These initial studies are discussed in light of their potential value for identifying challenging metabolite species.</description><subject>Analytical Chemistry</subject><subject>Bioinformatics</subject><subject>Biotechnology</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>Deuterium</subject><subject>Deuterium - chemistry</subject><subject>Deuterium Exchange Measurement - economics</subject><subject>Deuterium Exchange Measurement - instrumentation</subject><subject>Equipment Design</subject><subject>Exchanging</subject><subject>Focus: Ion Mobility Spectrometry (IMS): Research Article</subject><subject>Hydrogen</subject><subject>Hydrogen - chemistry</subject><subject>Ionization</subject><subject>Mass spectrometry</subject><subject>Mass Spectrometry - economics</subject><subject>Mass Spectrometry - instrumentation</subject><subject>Metabolites</subject><subject>Metabolomics - economics</subject><subject>Metabolomics - instrumentation</subject><subject>Organic Chemistry</subject><subject>Parameters</subject><subject>Proteomics</subject><subject>Reagents</subject><subject>Time Factors</subject><issn>1044-0305</issn><issn>1879-1123</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNp9kUtLxDAQx4Movr-AByl48RKdPNqmR1kfK6woPvAY0nSqlbZZkxb025t1fYAHTxkyv_knzI-QPQZHDCA_DkyIjFFgBQXOMkFhhWwylReUMS5WYw1SUhCQbpCtEF4AWA5Fvk42BBQKhOKb5PHWzJsquXPtODSupzfPJmAyfa-8e8L--BTHAX0zdsnZm302_RMmtfPJFQ6mdG0zYDJx3dyNfZVcVtgPTd1YswjaIWu1aQPufp3b5OH87H4ypbPri8vJyYxaCWKgiFgKlUkuuCytUrJSIl5gLQ0zNlMG0zSVlSktZzVYUyHKIhUSmLI51oXYJofL3Ll3ryOGQXdNsNi2pkc3Bs05FBmDPOMRPfiDvrjR9_F3keIpB5XK4n8qIov9Lii-pKx3IXis9dw3nfHvmoFeyNFLOTrK0Z9yNMSh_a_oseyw-hn5thEBsQRCbMVd-9-3_4n9AKH7mUo</recordid><startdate>20190601</startdate><enddate>20190601</enddate><creator>Majuta, Sandra N.</creator><creator>Li, Chong</creator><creator>Jayasundara, Kinkini</creator><creator>Kiani Karanji, Ahmad</creator><creator>Attanayake, Kushani</creator><creator>Ranganathan, Nandhini</creator><creator>Li, Peng</creator><creator>Valentine, Stephen J.</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>K9.</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-4360-2928</orcidid></search><sort><creationdate>20190601</creationdate><title>Rapid Solution-Phase Hydrogen/Deuterium Exchange for Metabolite Compound Identification</title><author>Majuta, Sandra N. ; Li, Chong ; Jayasundara, Kinkini ; Kiani Karanji, Ahmad ; Attanayake, Kushani ; Ranganathan, Nandhini ; Li, Peng ; Valentine, Stephen J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c403t-eeeb38642324bc884d83b38ef4a1ac68ae5554dabc21f0cadee49534018c7ef93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Analytical Chemistry</topic><topic>Bioinformatics</topic><topic>Biotechnology</topic><topic>Chemistry</topic><topic>Chemistry and Materials Science</topic><topic>Deuterium</topic><topic>Deuterium - chemistry</topic><topic>Deuterium Exchange Measurement - economics</topic><topic>Deuterium Exchange Measurement - instrumentation</topic><topic>Equipment Design</topic><topic>Exchanging</topic><topic>Focus: Ion Mobility Spectrometry (IMS): Research Article</topic><topic>Hydrogen</topic><topic>Hydrogen - chemistry</topic><topic>Ionization</topic><topic>Mass spectrometry</topic><topic>Mass Spectrometry - economics</topic><topic>Mass Spectrometry - instrumentation</topic><topic>Metabolites</topic><topic>Metabolomics - economics</topic><topic>Metabolomics - instrumentation</topic><topic>Organic Chemistry</topic><topic>Parameters</topic><topic>Proteomics</topic><topic>Reagents</topic><topic>Time Factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Majuta, Sandra N.</creatorcontrib><creatorcontrib>Li, Chong</creatorcontrib><creatorcontrib>Jayasundara, Kinkini</creatorcontrib><creatorcontrib>Kiani Karanji, Ahmad</creatorcontrib><creatorcontrib>Attanayake, Kushani</creatorcontrib><creatorcontrib>Ranganathan, Nandhini</creatorcontrib><creatorcontrib>Li, Peng</creatorcontrib><creatorcontrib>Valentine, Stephen J.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of the American Society for Mass Spectrometry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Majuta, Sandra N.</au><au>Li, Chong</au><au>Jayasundara, Kinkini</au><au>Kiani Karanji, Ahmad</au><au>Attanayake, Kushani</au><au>Ranganathan, Nandhini</au><au>Li, Peng</au><au>Valentine, Stephen J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Rapid Solution-Phase Hydrogen/Deuterium Exchange for Metabolite Compound Identification</atitle><jtitle>Journal of the American Society for Mass Spectrometry</jtitle><stitle>J. Am. Soc. Mass Spectrom</stitle><addtitle>J Am Soc Mass Spectrom</addtitle><date>2019-06-01</date><risdate>2019</risdate><volume>30</volume><issue>6</issue><spage>1102</spage><epage>1114</epage><pages>1102-1114</pages><issn>1044-0305</issn><eissn>1879-1123</eissn><abstract>Rapid, solution-phase hydrogen/deuterium exchange (HDX) coupled with mass spectrometry (MS) is demonstrated as a means for distinguishing small-molecule metabolites. HDX is achieved using capillary vibrating sharp-edge spray ionization (cVSSI) to allow sufficient time for reagent mixing and exchange in micrometer-sized droplets. Different compounds are observed to incorporate deuterium with varying efficiencies resulting in unique isotopic patterns as revealed in the MS spectra. Using linear regression techniques, parameters representing contribution to exchange by different hydrogen types can be computed. 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subjects | Analytical Chemistry Bioinformatics Biotechnology Chemistry Chemistry and Materials Science Deuterium Deuterium - chemistry Deuterium Exchange Measurement - economics Deuterium Exchange Measurement - instrumentation Equipment Design Exchanging Focus: Ion Mobility Spectrometry (IMS): Research Article Hydrogen Hydrogen - chemistry Ionization Mass spectrometry Mass Spectrometry - economics Mass Spectrometry - instrumentation Metabolites Metabolomics - economics Metabolomics - instrumentation Organic Chemistry Parameters Proteomics Reagents Time Factors |
title | Rapid Solution-Phase Hydrogen/Deuterium Exchange for Metabolite Compound Identification |
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