Smeared multiscale finite element model for electrophysiology and ionic transport in biological tissue

• Published in: Computers in biology and medicine 2019-05, Vol.108, p.288-304
• Main Authors: Kojic, M., Milosevic, M., Simic, V., Geroski, V., Ziemys, A., Filipovic, N., Ferrari, M.
• Format: Article
• Language: English
• Subjects: Biological properties; Biological tissue; Blood vessels; Brain; Cell interior; Charged particles; Composite smeared finite elements; Computation; Computational neuroscience; Cytoplasm; Electric fields; Electrical properties; Electrophysiology; Finite element method; Heart; Mass transport; Mathematical analysis; Mathematical models; Membranes; Multiscale analysis; Multiscale models; Nerve network; Nervous system; Neural networks; Organelles; Physiology; Potassium; Propagation; Tissues
• ISSN: 0010-4825; 1879-0534
• DOI: 10.1016/j.compbiomed.2019.03.023

Basic functions of living organisms are governed by the nervous system through bidirectional signals transmitted from the brain to neural networks. These signals are similar to electrical waves. In electrophysiology the goal is to study the electrical properties of biological cells and tissues, and the transmission of signals. From a physics perspective, there exists a field of electrical potential within the living body, the nervous system, extracellular space and cells. Electrophysiological problems can be investigated experimentally and also theoretically by developing appropriate mathematical or computational models. Due to the enormous complexity of biological systems, it would be almost impossible to establish a detailed computational model of the electrical field, even for only a single organ (e.g. heart), including the entirety of cells comprising the neural network. In order to make computational models feasible for practical applications, we here introduce the concept of smeared fields, which represents a generalization of the previously formulated multiscale smeared methodology for mass transport in blood vessels, lymph, and tissue. We demonstrate the accuracy of the smeared finite element computational models for the electric field in numerical examples. The electrical field is further coupled with ionic mass transport within tissue composed of interstitial spaces extracellularly and by cytoplasm and organelles intracellularly. The proposed methodology, which couples electrophysiology and molecular ionic transport, is applicable to a variety of biological systems.