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Identification of a novel esterase from the thermophilic bacterium Geobacillus thermodenitrificans NG80-2
In the framework of the discovery of new thermophilic enzymes of potential biotechnological interest, we embarked in the characterization of a new thermophilic esterase from the thermophilic bacterium Geobacillus thermodenitrificans . The phylogenetic analysis of the GTNG_0744 esterase indicated tha...
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Published in: | Extremophiles : life under extreme conditions 2019-07, Vol.23 (4), p.407-419 |
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description | In the framework of the discovery of new thermophilic enzymes of potential biotechnological interest, we embarked in the characterization of a new thermophilic esterase from the thermophilic bacterium
Geobacillus thermodenitrificans
. The phylogenetic analysis of the GTNG_0744 esterase indicated that the sequence belongs to the enterochelin/enterobactin esterase group, which have never been recognized as a family in the lipases/esterase classification. These enzymes catalyze the last step in the acquisition of environmental Fe
3+
through siderophore hydrolysis. In silico analysis revealed, for the first time, that the machinery for the uptake of siderophores is present in
G. thermodenitrificans
. The purified recombinant enzyme, EstGtA3, showed different substrate specificity from known enterochelin/enterobactin esterases, recognizing short chain esters with a higher specificity constant for 4-NP caprylate. The enzyme does not require cofactors for its activity, is active in the pH range 7.0–8.5, has highest activity at 60 °C and is 100% stable when incubated for 16 h at 55 °C. DTT, β-mercaptoethanol and Triton X-100 have an activating effect on the enzymatic activity. Organic solvents have in general a negative effect on the enzyme, but n-hexane is a strong activator up to 150, making EstGtA3 a good candidate for applications in biotechnology. |
doi_str_mv | 10.1007/s00792-019-01093-9 |
format | article |
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Geobacillus thermodenitrificans
. The phylogenetic analysis of the GTNG_0744 esterase indicated that the sequence belongs to the enterochelin/enterobactin esterase group, which have never been recognized as a family in the lipases/esterase classification. These enzymes catalyze the last step in the acquisition of environmental Fe
3+
through siderophore hydrolysis. In silico analysis revealed, for the first time, that the machinery for the uptake of siderophores is present in
G. thermodenitrificans
. The purified recombinant enzyme, EstGtA3, showed different substrate specificity from known enterochelin/enterobactin esterases, recognizing short chain esters with a higher specificity constant for 4-NP caprylate. The enzyme does not require cofactors for its activity, is active in the pH range 7.0–8.5, has highest activity at 60 °C and is 100% stable when incubated for 16 h at 55 °C. DTT, β-mercaptoethanol and Triton X-100 have an activating effect on the enzymatic activity. Organic solvents have in general a negative effect on the enzyme, but n-hexane is a strong activator up to 150, making EstGtA3 a good candidate for applications in biotechnology.</description><identifier>ISSN: 1431-0651</identifier><identifier>EISSN: 1433-4909</identifier><identifier>DOI: 10.1007/s00792-019-01093-9</identifier><identifier>PMID: 31053933</identifier><language>eng</language><publisher>Tokyo: Springer Japan</publisher><subject>12th International Congress on Extremophiles ; Bacteria ; Biochemistry ; Biomedical and Life Sciences ; Biotechnology ; Cofactors ; Dithiothreitol ; Enterobactin ; Enzymatic activity ; Enzyme activity ; Enzymes ; Esterase ; Esterases ; Esters ; Geobacillus thermodenitrificans ; Iron ; Life Sciences ; Microbial Ecology ; Microbiology ; n-Hexane ; Organic solvents ; Original Paper ; Phylogeny ; Recombinants ; Siderophores ; Space life sciences ; Specificity ; Substrate specificity ; Substrates ; Uptake</subject><ispartof>Extremophiles : life under extreme conditions, 2019-07, Vol.23 (4), p.407-419</ispartof><rights>Springer Japan KK, part of Springer Nature 2019</rights><rights>Extremophiles is a copyright of Springer, (2019). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c441t-524f518f4c457f1c7441963d40cba1af22c22b2944b2c054a3fb6af5676ed3e13</citedby><cites>FETCH-LOGICAL-c441t-524f518f4c457f1c7441963d40cba1af22c22b2944b2c054a3fb6af5676ed3e13</cites><orcidid>0000-0002-8211-2297</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,27905,27906</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31053933$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Curci, Nicola</creatorcontrib><creatorcontrib>Strazzulli, Andrea</creatorcontrib><creatorcontrib>De Lise, Federica</creatorcontrib><creatorcontrib>Iacono, Roberta</creatorcontrib><creatorcontrib>Maurelli, Luisa</creatorcontrib><creatorcontrib>Dal Piaz, Fabrizio</creatorcontrib><creatorcontrib>Cobucci-Ponzano, Beatrice</creatorcontrib><creatorcontrib>Moracci, Marco</creatorcontrib><title>Identification of a novel esterase from the thermophilic bacterium Geobacillus thermodenitrificans NG80-2</title><title>Extremophiles : life under extreme conditions</title><addtitle>Extremophiles</addtitle><addtitle>Extremophiles</addtitle><description>In the framework of the discovery of new thermophilic enzymes of potential biotechnological interest, we embarked in the characterization of a new thermophilic esterase from the thermophilic bacterium
Geobacillus thermodenitrificans
. The phylogenetic analysis of the GTNG_0744 esterase indicated that the sequence belongs to the enterochelin/enterobactin esterase group, which have never been recognized as a family in the lipases/esterase classification. These enzymes catalyze the last step in the acquisition of environmental Fe
3+
through siderophore hydrolysis. In silico analysis revealed, for the first time, that the machinery for the uptake of siderophores is present in
G. thermodenitrificans
. The purified recombinant enzyme, EstGtA3, showed different substrate specificity from known enterochelin/enterobactin esterases, recognizing short chain esters with a higher specificity constant for 4-NP caprylate. The enzyme does not require cofactors for its activity, is active in the pH range 7.0–8.5, has highest activity at 60 °C and is 100% stable when incubated for 16 h at 55 °C. DTT, β-mercaptoethanol and Triton X-100 have an activating effect on the enzymatic activity. Organic solvents have in general a negative effect on the enzyme, but n-hexane is a strong activator up to 150, making EstGtA3 a good candidate for applications in biotechnology.</description><subject>12th International Congress on Extremophiles</subject><subject>Bacteria</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Cofactors</subject><subject>Dithiothreitol</subject><subject>Enterobactin</subject><subject>Enzymatic activity</subject><subject>Enzyme activity</subject><subject>Enzymes</subject><subject>Esterase</subject><subject>Esterases</subject><subject>Esters</subject><subject>Geobacillus thermodenitrificans</subject><subject>Iron</subject><subject>Life Sciences</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>n-Hexane</subject><subject>Organic solvents</subject><subject>Original Paper</subject><subject>Phylogeny</subject><subject>Recombinants</subject><subject>Siderophores</subject><subject>Space life sciences</subject><subject>Specificity</subject><subject>Substrate specificity</subject><subject>Substrates</subject><subject>Uptake</subject><issn>1431-0651</issn><issn>1433-4909</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNp9kctOAyEUhonR2Fp9AReGxI0blNtcWJpGaxOjG10ThgFLMzNUmDHx7aWdqokLF4fb-c4PnB-Ac4KvCcbFTUyDoAgTkQILhsQBmBLOGOICi8PdmiCcZ2QCTmJcY0yylDgGE0ZwxgRjU-CWtel6Z51WvfMd9BYq2PkP00ATexNUNNAG38J-ZbYRWr9ZucZpWCmd8m5o4cL4tHFNM8Q9kjRdH3aqXYRPixIjegqOrGqiOdvPM_B6f_cyf0CPz4vl_PYRac5JjzLKbUZKyzXPCkt0kU5FzmqOdaWIspRqSisqOK-oxhlXzFa5slle5KZmhrAZuBp1N8G_D-kTsnVRm6ZRnfFDlJRSQVmJGU3o5R907YfQpdcliqT-lDwXiaIjpYOPMRgrN8G1KnxKguXWCDkaIZMRcmeE3BZd7KWHqjX1T8l35xPARiCmVPdmwu_d_8h-AVHdkys</recordid><startdate>20190701</startdate><enddate>20190701</enddate><creator>Curci, 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of a novel esterase from the thermophilic bacterium Geobacillus thermodenitrificans NG80-2</title><author>Curci, Nicola ; Strazzulli, Andrea ; De Lise, Federica ; Iacono, Roberta ; Maurelli, Luisa ; Dal Piaz, Fabrizio ; Cobucci-Ponzano, Beatrice ; Moracci, Marco</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c441t-524f518f4c457f1c7441963d40cba1af22c22b2944b2c054a3fb6af5676ed3e13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>12th International Congress on Extremophiles</topic><topic>Bacteria</topic><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Cofactors</topic><topic>Dithiothreitol</topic><topic>Enterobactin</topic><topic>Enzymatic activity</topic><topic>Enzyme activity</topic><topic>Enzymes</topic><topic>Esterase</topic><topic>Esterases</topic><topic>Esters</topic><topic>Geobacillus 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Luisa</au><au>Dal Piaz, Fabrizio</au><au>Cobucci-Ponzano, Beatrice</au><au>Moracci, Marco</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of a novel esterase from the thermophilic bacterium Geobacillus thermodenitrificans NG80-2</atitle><jtitle>Extremophiles : life under extreme conditions</jtitle><stitle>Extremophiles</stitle><addtitle>Extremophiles</addtitle><date>2019-07-01</date><risdate>2019</risdate><volume>23</volume><issue>4</issue><spage>407</spage><epage>419</epage><pages>407-419</pages><issn>1431-0651</issn><eissn>1433-4909</eissn><abstract>In the framework of the discovery of new thermophilic enzymes of potential biotechnological interest, we embarked in the characterization of a new thermophilic esterase from the thermophilic bacterium
Geobacillus thermodenitrificans
. The phylogenetic analysis of the GTNG_0744 esterase indicated that the sequence belongs to the enterochelin/enterobactin esterase group, which have never been recognized as a family in the lipases/esterase classification. These enzymes catalyze the last step in the acquisition of environmental Fe
3+
through siderophore hydrolysis. In silico analysis revealed, for the first time, that the machinery for the uptake of siderophores is present in
G. thermodenitrificans
. The purified recombinant enzyme, EstGtA3, showed different substrate specificity from known enterochelin/enterobactin esterases, recognizing short chain esters with a higher specificity constant for 4-NP caprylate. The enzyme does not require cofactors for its activity, is active in the pH range 7.0–8.5, has highest activity at 60 °C and is 100% stable when incubated for 16 h at 55 °C. DTT, β-mercaptoethanol and Triton X-100 have an activating effect on the enzymatic activity. Organic solvents have in general a negative effect on the enzyme, but n-hexane is a strong activator up to 150, making EstGtA3 a good candidate for applications in biotechnology.</abstract><cop>Tokyo</cop><pub>Springer Japan</pub><pmid>31053933</pmid><doi>10.1007/s00792-019-01093-9</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0002-8211-2297</orcidid></addata></record> |
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subjects | 12th International Congress on Extremophiles Bacteria Biochemistry Biomedical and Life Sciences Biotechnology Cofactors Dithiothreitol Enterobactin Enzymatic activity Enzyme activity Enzymes Esterase Esterases Esters Geobacillus thermodenitrificans Iron Life Sciences Microbial Ecology Microbiology n-Hexane Organic solvents Original Paper Phylogeny Recombinants Siderophores Space life sciences Specificity Substrate specificity Substrates Uptake |
title | Identification of a novel esterase from the thermophilic bacterium Geobacillus thermodenitrificans NG80-2 |
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