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Cell-free expression of natively folded hydrophobins
Hydrophobins are a family of cysteine-rich proteins unique to filamentous fungi. The proteins are produced in a soluble form but self-assemble into organised amphipathic layers at hydrophilic:hydrophobic interfaces. These layers contribute to transitions between wet and dry environments, spore dispe...
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Published in: | Protein expression and purification 2020-06, Vol.170, p.105591-105591, Article 105591 |
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creator | Siddiquee, Rezwan Choi, Samuel Sung-chan Lam, Shirley Siuley Wang, Patrick Qi, Ruhu Otting, Gottfried Sunde, Margaret Kwan, Ann Hau-yu |
description | Hydrophobins are a family of cysteine-rich proteins unique to filamentous fungi. The proteins are produced in a soluble form but self-assemble into organised amphipathic layers at hydrophilic:hydrophobic interfaces. These layers contribute to transitions between wet and dry environments, spore dispersal and attachment to surfaces for growth and infection. Hydrophobins are characterised by four disulphide bonds that are critical to their structure and function. Thus, obtaining correctly folded, soluble and functional hydrophobins directly from bacterial recombinant expression is challenging and in most cases, initial denaturation from inclusion bodies followed by oxidative refolding are required to obtain folded proteins.
Here, we report the use of cell-free expression with E. coli cell lysate to directly obtain natively folded hydrophobins. All six of the hydrophobins tested could be expressed after optimisation of redox conditions. For some hydrophobins, the inclusion of the disulfide isomerase DsbC further enhanced expression levels. We are able to achieve a yield of up to 1 mg of natively folded hydrophobin per mL of reaction. This has allowed the confirmation of the correct folding of hydrophobins with the use of 15N-cysteine and 15N–1H nuclear magnetic resonance experiments within 24 h of starting from plasmid stocks.
•Cell-free expression with E. coli cell lysate can be used to directly obtain natively folded hydrophobins.•For some hydrophobins, addition of the disulfide isomerase DsbC can further enhance hydrophobin expression levels.•After optimisation, a yield of 0.1 to 1 milligram of natively folded hydrophobins per mL of reaction can be obtained.•The use of 15N-cysteine and NMR experiments enables an assessment of correct hydrophobin folding within 24 hours. |
doi_str_mv | 10.1016/j.pep.2020.105591 |
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Here, we report the use of cell-free expression with E. coli cell lysate to directly obtain natively folded hydrophobins. All six of the hydrophobins tested could be expressed after optimisation of redox conditions. For some hydrophobins, the inclusion of the disulfide isomerase DsbC further enhanced expression levels. We are able to achieve a yield of up to 1 mg of natively folded hydrophobin per mL of reaction. This has allowed the confirmation of the correct folding of hydrophobins with the use of 15N-cysteine and 15N–1H nuclear magnetic resonance experiments within 24 h of starting from plasmid stocks.
•Cell-free expression with E. coli cell lysate can be used to directly obtain natively folded hydrophobins.•For some hydrophobins, addition of the disulfide isomerase DsbC can further enhance hydrophobin expression levels.•After optimisation, a yield of 0.1 to 1 milligram of natively folded hydrophobins per mL of reaction can be obtained.•The use of 15N-cysteine and NMR experiments enables an assessment of correct hydrophobin folding within 24 hours.</description><identifier>ISSN: 1046-5928</identifier><identifier>EISSN: 1096-0279</identifier><identifier>DOI: 10.1016/j.pep.2020.105591</identifier><identifier>PMID: 32032769</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Amino Acid Sequence ; Binding Sites ; Cell-free expression ; Cloning, Molecular ; Cysteine - chemistry ; Cysteine - metabolism ; Disulphide bond ; Escherichia coli - chemistry ; Escherichia coli Proteins - genetics ; Escherichia coli Proteins - metabolism ; Fungal Proteins - chemistry ; Fungal Proteins - genetics ; Fungal Proteins - isolation & purification ; Fungal Proteins - metabolism ; Gene Expression ; Genetic Vectors - chemistry ; Genetic Vectors - metabolism ; Hydrophobic and Hydrophilic Interactions ; Hydrophobin ; Isotope Labeling ; Kinetics ; Models, Molecular ; Nitrogen Isotopes - chemistry ; NMR spectroscopy ; Nuclear Magnetic Resonance, Biomolecular ; Protein Binding ; Protein Conformation, alpha-Helical ; Protein Conformation, beta-Strand ; Protein Disulfide-Isomerases - genetics ; Protein Disulfide-Isomerases - metabolism ; Protein Interaction Domains and Motifs ; Recombinant Proteins - chemistry ; Recombinant Proteins - genetics ; Recombinant Proteins - metabolism ; Sequence Alignment ; Sequence Homology, Amino Acid ; Subcellular Fractions - metabolism</subject><ispartof>Protein expression and purification, 2020-06, Vol.170, p.105591-105591, Article 105591</ispartof><rights>2020 Elsevier Inc.</rights><rights>Copyright © 2020 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c396t-dffd0a982c861c77b313043aa5a2ca743f050a74082a0c740168495680f1d0b93</citedby><cites>FETCH-LOGICAL-c396t-dffd0a982c861c77b313043aa5a2ca743f050a74082a0c740168495680f1d0b93</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32032769$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Siddiquee, Rezwan</creatorcontrib><creatorcontrib>Choi, Samuel Sung-chan</creatorcontrib><creatorcontrib>Lam, Shirley Siuley</creatorcontrib><creatorcontrib>Wang, Patrick</creatorcontrib><creatorcontrib>Qi, Ruhu</creatorcontrib><creatorcontrib>Otting, Gottfried</creatorcontrib><creatorcontrib>Sunde, Margaret</creatorcontrib><creatorcontrib>Kwan, Ann Hau-yu</creatorcontrib><title>Cell-free expression of natively folded hydrophobins</title><title>Protein expression and purification</title><addtitle>Protein Expr Purif</addtitle><description>Hydrophobins are a family of cysteine-rich proteins unique to filamentous fungi. The proteins are produced in a soluble form but self-assemble into organised amphipathic layers at hydrophilic:hydrophobic interfaces. These layers contribute to transitions between wet and dry environments, spore dispersal and attachment to surfaces for growth and infection. Hydrophobins are characterised by four disulphide bonds that are critical to their structure and function. Thus, obtaining correctly folded, soluble and functional hydrophobins directly from bacterial recombinant expression is challenging and in most cases, initial denaturation from inclusion bodies followed by oxidative refolding are required to obtain folded proteins.
Here, we report the use of cell-free expression with E. coli cell lysate to directly obtain natively folded hydrophobins. All six of the hydrophobins tested could be expressed after optimisation of redox conditions. For some hydrophobins, the inclusion of the disulfide isomerase DsbC further enhanced expression levels. We are able to achieve a yield of up to 1 mg of natively folded hydrophobin per mL of reaction. This has allowed the confirmation of the correct folding of hydrophobins with the use of 15N-cysteine and 15N–1H nuclear magnetic resonance experiments within 24 h of starting from plasmid stocks.
•Cell-free expression with E. coli cell lysate can be used to directly obtain natively folded hydrophobins.•For some hydrophobins, addition of the disulfide isomerase DsbC can further enhance hydrophobin expression levels.•After optimisation, a yield of 0.1 to 1 milligram of natively folded hydrophobins per mL of reaction can be obtained.•The use of 15N-cysteine and NMR experiments enables an assessment of correct hydrophobin folding within 24 hours.</description><subject>Amino Acid Sequence</subject><subject>Binding Sites</subject><subject>Cell-free expression</subject><subject>Cloning, Molecular</subject><subject>Cysteine - chemistry</subject><subject>Cysteine - metabolism</subject><subject>Disulphide bond</subject><subject>Escherichia coli - chemistry</subject><subject>Escherichia coli Proteins - genetics</subject><subject>Escherichia coli Proteins - metabolism</subject><subject>Fungal Proteins - chemistry</subject><subject>Fungal Proteins - genetics</subject><subject>Fungal Proteins - isolation & purification</subject><subject>Fungal Proteins - metabolism</subject><subject>Gene Expression</subject><subject>Genetic Vectors - chemistry</subject><subject>Genetic Vectors - metabolism</subject><subject>Hydrophobic and Hydrophilic Interactions</subject><subject>Hydrophobin</subject><subject>Isotope Labeling</subject><subject>Kinetics</subject><subject>Models, Molecular</subject><subject>Nitrogen Isotopes - chemistry</subject><subject>NMR spectroscopy</subject><subject>Nuclear Magnetic Resonance, Biomolecular</subject><subject>Protein Binding</subject><subject>Protein Conformation, alpha-Helical</subject><subject>Protein Conformation, beta-Strand</subject><subject>Protein Disulfide-Isomerases - genetics</subject><subject>Protein Disulfide-Isomerases - metabolism</subject><subject>Protein Interaction Domains and Motifs</subject><subject>Recombinant Proteins - chemistry</subject><subject>Recombinant Proteins - genetics</subject><subject>Recombinant Proteins - metabolism</subject><subject>Sequence Alignment</subject><subject>Sequence Homology, Amino Acid</subject><subject>Subcellular Fractions - metabolism</subject><issn>1046-5928</issn><issn>1096-0279</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNp9kE9LAzEQxYMoVqsfwIvs0cvWSbLJbvAkxX9Q8KLnkCYTmrLdrElb7Ld3S6tHT28G3nvM_Ai5oTChQOX9ctJjP2HA9rsQip6QCwpKlsBqdbqfK1kKxZoRucx5CUCpBHFORpwBZ7VUF6SaYtuWPiEW-N0nzDnEroi-6Mw6bLHdFT62Dl2x2LkU-0Wchy5fkTNv2ozXRx2Tz-enj-lrOXt_eZs-zkrLlVyXznsHRjXMNpLaup5zyqHixgjDrKkr7kHAoNAwA3ZQKptKCdmApw7mio_J3aG3T_Frg3mtVyHb4WDTYdxkzbhgsqJKisFKD1abYs4Jve5TWJm00xT0HpZe6gGW3sPSB1hD5vZYv5mv0P0lfukMhoeDAYcntwGTzjZgZ9GFhHatXQz_1P8AO2d4Sw</recordid><startdate>202006</startdate><enddate>202006</enddate><creator>Siddiquee, Rezwan</creator><creator>Choi, Samuel Sung-chan</creator><creator>Lam, Shirley Siuley</creator><creator>Wang, Patrick</creator><creator>Qi, Ruhu</creator><creator>Otting, Gottfried</creator><creator>Sunde, Margaret</creator><creator>Kwan, Ann Hau-yu</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>202006</creationdate><title>Cell-free expression of natively folded hydrophobins</title><author>Siddiquee, Rezwan ; Choi, Samuel Sung-chan ; Lam, Shirley Siuley ; Wang, Patrick ; Qi, Ruhu ; Otting, Gottfried ; Sunde, Margaret ; Kwan, Ann Hau-yu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c396t-dffd0a982c861c77b313043aa5a2ca743f050a74082a0c740168495680f1d0b93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Amino Acid Sequence</topic><topic>Binding Sites</topic><topic>Cell-free expression</topic><topic>Cloning, Molecular</topic><topic>Cysteine - chemistry</topic><topic>Cysteine - metabolism</topic><topic>Disulphide bond</topic><topic>Escherichia coli - chemistry</topic><topic>Escherichia coli Proteins - genetics</topic><topic>Escherichia coli Proteins - metabolism</topic><topic>Fungal Proteins - chemistry</topic><topic>Fungal Proteins - genetics</topic><topic>Fungal Proteins - isolation & purification</topic><topic>Fungal Proteins - metabolism</topic><topic>Gene Expression</topic><topic>Genetic Vectors - chemistry</topic><topic>Genetic Vectors - metabolism</topic><topic>Hydrophobic and Hydrophilic Interactions</topic><topic>Hydrophobin</topic><topic>Isotope Labeling</topic><topic>Kinetics</topic><topic>Models, Molecular</topic><topic>Nitrogen Isotopes - chemistry</topic><topic>NMR spectroscopy</topic><topic>Nuclear Magnetic Resonance, Biomolecular</topic><topic>Protein Binding</topic><topic>Protein Conformation, alpha-Helical</topic><topic>Protein Conformation, beta-Strand</topic><topic>Protein Disulfide-Isomerases - genetics</topic><topic>Protein Disulfide-Isomerases - metabolism</topic><topic>Protein Interaction Domains and Motifs</topic><topic>Recombinant Proteins - chemistry</topic><topic>Recombinant Proteins - genetics</topic><topic>Recombinant Proteins - metabolism</topic><topic>Sequence Alignment</topic><topic>Sequence Homology, Amino Acid</topic><topic>Subcellular Fractions - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Siddiquee, Rezwan</creatorcontrib><creatorcontrib>Choi, Samuel Sung-chan</creatorcontrib><creatorcontrib>Lam, Shirley Siuley</creatorcontrib><creatorcontrib>Wang, Patrick</creatorcontrib><creatorcontrib>Qi, Ruhu</creatorcontrib><creatorcontrib>Otting, Gottfried</creatorcontrib><creatorcontrib>Sunde, Margaret</creatorcontrib><creatorcontrib>Kwan, Ann Hau-yu</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Protein expression and purification</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Siddiquee, Rezwan</au><au>Choi, Samuel Sung-chan</au><au>Lam, Shirley Siuley</au><au>Wang, Patrick</au><au>Qi, Ruhu</au><au>Otting, Gottfried</au><au>Sunde, Margaret</au><au>Kwan, Ann Hau-yu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cell-free expression of natively folded hydrophobins</atitle><jtitle>Protein expression and purification</jtitle><addtitle>Protein Expr Purif</addtitle><date>2020-06</date><risdate>2020</risdate><volume>170</volume><spage>105591</spage><epage>105591</epage><pages>105591-105591</pages><artnum>105591</artnum><issn>1046-5928</issn><eissn>1096-0279</eissn><abstract>Hydrophobins are a family of cysteine-rich proteins unique to filamentous fungi. The proteins are produced in a soluble form but self-assemble into organised amphipathic layers at hydrophilic:hydrophobic interfaces. These layers contribute to transitions between wet and dry environments, spore dispersal and attachment to surfaces for growth and infection. Hydrophobins are characterised by four disulphide bonds that are critical to their structure and function. Thus, obtaining correctly folded, soluble and functional hydrophobins directly from bacterial recombinant expression is challenging and in most cases, initial denaturation from inclusion bodies followed by oxidative refolding are required to obtain folded proteins.
Here, we report the use of cell-free expression with E. coli cell lysate to directly obtain natively folded hydrophobins. All six of the hydrophobins tested could be expressed after optimisation of redox conditions. For some hydrophobins, the inclusion of the disulfide isomerase DsbC further enhanced expression levels. We are able to achieve a yield of up to 1 mg of natively folded hydrophobin per mL of reaction. This has allowed the confirmation of the correct folding of hydrophobins with the use of 15N-cysteine and 15N–1H nuclear magnetic resonance experiments within 24 h of starting from plasmid stocks.
•Cell-free expression with E. coli cell lysate can be used to directly obtain natively folded hydrophobins.•For some hydrophobins, addition of the disulfide isomerase DsbC can further enhance hydrophobin expression levels.•After optimisation, a yield of 0.1 to 1 milligram of natively folded hydrophobins per mL of reaction can be obtained.•The use of 15N-cysteine and NMR experiments enables an assessment of correct hydrophobin folding within 24 hours.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>32032769</pmid><doi>10.1016/j.pep.2020.105591</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Binding Sites Cell-free expression Cloning, Molecular Cysteine - chemistry Cysteine - metabolism Disulphide bond Escherichia coli - chemistry Escherichia coli Proteins - genetics Escherichia coli Proteins - metabolism Fungal Proteins - chemistry Fungal Proteins - genetics Fungal Proteins - isolation & purification Fungal Proteins - metabolism Gene Expression Genetic Vectors - chemistry Genetic Vectors - metabolism Hydrophobic and Hydrophilic Interactions Hydrophobin Isotope Labeling Kinetics Models, Molecular Nitrogen Isotopes - chemistry NMR spectroscopy Nuclear Magnetic Resonance, Biomolecular Protein Binding Protein Conformation, alpha-Helical Protein Conformation, beta-Strand Protein Disulfide-Isomerases - genetics Protein Disulfide-Isomerases - metabolism Protein Interaction Domains and Motifs Recombinant Proteins - chemistry Recombinant Proteins - genetics Recombinant Proteins - metabolism Sequence Alignment Sequence Homology, Amino Acid Subcellular Fractions - metabolism |
title | Cell-free expression of natively folded hydrophobins |
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