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Personalized prediction of depression in patients with newly diagnosed Parkinson's disease: A prospective cohort study
•Promising tools were developed to provide personalized estimates of depression in early PD.•The DARGDS score was derived.•The novel machine learning technique was applied.•2 PD-specific and 4 nonspecific factors were identified as important predictors of depression in PD.•An addition to understandi...
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Published in: | Journal of affective disorders 2020-05, Vol.268, p.118-126 |
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container_title | Journal of affective disorders |
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creator | Gu, Si-Chun Zhou, Jie Yuan, Can-Xing Ye, Qing |
description | •Promising tools were developed to provide personalized estimates of depression in early PD.•The DARGDS score was derived.•The novel machine learning technique was applied.•2 PD-specific and 4 nonspecific factors were identified as important predictors of depression in PD.•An addition to understanding of the relationship between depression and PD.
Depressive disturbances in Parkinson's disease (dPD) have been identified as the most important determinant of quality of life in patients with Parkinson's disease (PD). Prediction models to triage patients at risk of depression early in the disease course are needed for prognosis and stratification of participants in clinical trials.
One machine learning algorithm called extreme gradient boosting (XGBoost) and the logistic regression technique were applied for the prediction of clinically significant depression (defined as The 15-item Geriatric Depression Scale [GDS-15] ≥ 5) using a prospective cohort study of 312 drug-naïve patients with newly diagnosed PD during 2-year follow-up from the Parkinson's Progression Markers Initiative (PPMI) database. Established models were assessed with out-of-sample validation and the whole sample was divided into training and testing samples by the ratio of 7:3.
Both XGBoost model and logistic regression model achieved good discrimination and calibration. 2 PD-specific factors (age at onset, duration) and 4 nonspecific factors (baseline GDS-15 score, State Trait Anxiety Inventory [STAI] score, Rapid Eye Movement Sleep Behavior Disorder Screening Questionnaire [RBDSQ] score, and history of depression) were identified as important predictors by two models.
Access to several variables was limited by database.
In this longitudinal study, we developed promising tools to provide personalized estimates of depression in early PD and studied the relative contribution of PD-specific and nonspecific predictors, constituting a substantial addition to the current understanding of dPD.
[Display omitted] |
doi_str_mv | 10.1016/j.jad.2020.02.046 |
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Depressive disturbances in Parkinson's disease (dPD) have been identified as the most important determinant of quality of life in patients with Parkinson's disease (PD). Prediction models to triage patients at risk of depression early in the disease course are needed for prognosis and stratification of participants in clinical trials.
One machine learning algorithm called extreme gradient boosting (XGBoost) and the logistic regression technique were applied for the prediction of clinically significant depression (defined as The 15-item Geriatric Depression Scale [GDS-15] ≥ 5) using a prospective cohort study of 312 drug-naïve patients with newly diagnosed PD during 2-year follow-up from the Parkinson's Progression Markers Initiative (PPMI) database. Established models were assessed with out-of-sample validation and the whole sample was divided into training and testing samples by the ratio of 7:3.
Both XGBoost model and logistic regression model achieved good discrimination and calibration. 2 PD-specific factors (age at onset, duration) and 4 nonspecific factors (baseline GDS-15 score, State Trait Anxiety Inventory [STAI] score, Rapid Eye Movement Sleep Behavior Disorder Screening Questionnaire [RBDSQ] score, and history of depression) were identified as important predictors by two models.
Access to several variables was limited by database.
In this longitudinal study, we developed promising tools to provide personalized estimates of depression in early PD and studied the relative contribution of PD-specific and nonspecific predictors, constituting a substantial addition to the current understanding of dPD.
[Display omitted]</description><identifier>ISSN: 0165-0327</identifier><identifier>EISSN: 1573-2517</identifier><identifier>DOI: 10.1016/j.jad.2020.02.046</identifier><identifier>PMID: 32158001</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Aged ; Depression ; Depression - diagnosis ; Depression - epidemiology ; Humans ; Longitudinal Studies ; Machine learning ; Parkinson Disease - complications ; Parkinson's disease ; Prediction model ; Prospective Studies ; Quality of Life</subject><ispartof>Journal of affective disorders, 2020-05, Vol.268, p.118-126</ispartof><rights>2020</rights><rights>Copyright © 2020. Published by Elsevier B.V.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c353t-d81db163483f748907326200a50e7069be5678030ab5218157851da0e9e47d753</citedby><cites>FETCH-LOGICAL-c353t-d81db163483f748907326200a50e7069be5678030ab5218157851da0e9e47d753</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32158001$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gu, Si-Chun</creatorcontrib><creatorcontrib>Zhou, Jie</creatorcontrib><creatorcontrib>Yuan, Can-Xing</creatorcontrib><creatorcontrib>Ye, Qing</creatorcontrib><title>Personalized prediction of depression in patients with newly diagnosed Parkinson's disease: A prospective cohort study</title><title>Journal of affective disorders</title><addtitle>J Affect Disord</addtitle><description>•Promising tools were developed to provide personalized estimates of depression in early PD.•The DARGDS score was derived.•The novel machine learning technique was applied.•2 PD-specific and 4 nonspecific factors were identified as important predictors of depression in PD.•An addition to understanding of the relationship between depression and PD.
Depressive disturbances in Parkinson's disease (dPD) have been identified as the most important determinant of quality of life in patients with Parkinson's disease (PD). Prediction models to triage patients at risk of depression early in the disease course are needed for prognosis and stratification of participants in clinical trials.
One machine learning algorithm called extreme gradient boosting (XGBoost) and the logistic regression technique were applied for the prediction of clinically significant depression (defined as The 15-item Geriatric Depression Scale [GDS-15] ≥ 5) using a prospective cohort study of 312 drug-naïve patients with newly diagnosed PD during 2-year follow-up from the Parkinson's Progression Markers Initiative (PPMI) database. Established models were assessed with out-of-sample validation and the whole sample was divided into training and testing samples by the ratio of 7:3.
Both XGBoost model and logistic regression model achieved good discrimination and calibration. 2 PD-specific factors (age at onset, duration) and 4 nonspecific factors (baseline GDS-15 score, State Trait Anxiety Inventory [STAI] score, Rapid Eye Movement Sleep Behavior Disorder Screening Questionnaire [RBDSQ] score, and history of depression) were identified as important predictors by two models.
Access to several variables was limited by database.
In this longitudinal study, we developed promising tools to provide personalized estimates of depression in early PD and studied the relative contribution of PD-specific and nonspecific predictors, constituting a substantial addition to the current understanding of dPD.
[Display omitted]</description><subject>Aged</subject><subject>Depression</subject><subject>Depression - diagnosis</subject><subject>Depression - epidemiology</subject><subject>Humans</subject><subject>Longitudinal Studies</subject><subject>Machine learning</subject><subject>Parkinson Disease - complications</subject><subject>Parkinson's disease</subject><subject>Prediction model</subject><subject>Prospective Studies</subject><subject>Quality of Life</subject><issn>0165-0327</issn><issn>1573-2517</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNp9kMFOGzEQhq2qqKS0D9AL8q297DK24_WGnhAqbSUkOMDZctaT4rBZB88mKDw9E4X22JM11j-f5v-E-KKgVqCas2W9DLHWoKEGXcO0eScmyjpTaavcezHhjK3AaHcsPhItAaCZOfggjo1WtgVQE7G9xUJ5CH16wSjXBWPqxpQHmRcyIs9E-ykNch3GhMNI8jmND3LA534nYwp_hky8eRvKYxqY9JX4lzAQnssLBmZaIxO3KLv8kMsoadzE3SdxtAg94ee390TcX_24u_xVXd_8_H15cV11xpqxiq2Kc9WYaWsWbtrOwBndaIBgAR2XmaNtXAsGwtxq1XL31qoYAGc4ddFZcyK-Hbh8yNMGafSrRB32fRgwb8hr4xqtjWk0R9Uh2vHNVHDh1yWtQtl5BX6v2y896_Z73R60Z928c_qG38xXGP9t_PXLge-HAHLJbcLiqWOLHWsurMXHnP6DfwUrVpB0</recordid><startdate>20200501</startdate><enddate>20200501</enddate><creator>Gu, Si-Chun</creator><creator>Zhou, Jie</creator><creator>Yuan, Can-Xing</creator><creator>Ye, Qing</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20200501</creationdate><title>Personalized prediction of depression in patients with newly diagnosed Parkinson's disease: A prospective cohort study</title><author>Gu, Si-Chun ; Zhou, Jie ; Yuan, Can-Xing ; Ye, Qing</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c353t-d81db163483f748907326200a50e7069be5678030ab5218157851da0e9e47d753</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Aged</topic><topic>Depression</topic><topic>Depression - diagnosis</topic><topic>Depression - epidemiology</topic><topic>Humans</topic><topic>Longitudinal Studies</topic><topic>Machine learning</topic><topic>Parkinson Disease - complications</topic><topic>Parkinson's disease</topic><topic>Prediction model</topic><topic>Prospective Studies</topic><topic>Quality of Life</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gu, Si-Chun</creatorcontrib><creatorcontrib>Zhou, Jie</creatorcontrib><creatorcontrib>Yuan, Can-Xing</creatorcontrib><creatorcontrib>Ye, Qing</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of affective disorders</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gu, Si-Chun</au><au>Zhou, Jie</au><au>Yuan, Can-Xing</au><au>Ye, Qing</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Personalized prediction of depression in patients with newly diagnosed Parkinson's disease: A prospective cohort study</atitle><jtitle>Journal of affective disorders</jtitle><addtitle>J Affect Disord</addtitle><date>2020-05-01</date><risdate>2020</risdate><volume>268</volume><spage>118</spage><epage>126</epage><pages>118-126</pages><issn>0165-0327</issn><eissn>1573-2517</eissn><abstract>•Promising tools were developed to provide personalized estimates of depression in early PD.•The DARGDS score was derived.•The novel machine learning technique was applied.•2 PD-specific and 4 nonspecific factors were identified as important predictors of depression in PD.•An addition to understanding of the relationship between depression and PD.
Depressive disturbances in Parkinson's disease (dPD) have been identified as the most important determinant of quality of life in patients with Parkinson's disease (PD). Prediction models to triage patients at risk of depression early in the disease course are needed for prognosis and stratification of participants in clinical trials.
One machine learning algorithm called extreme gradient boosting (XGBoost) and the logistic regression technique were applied for the prediction of clinically significant depression (defined as The 15-item Geriatric Depression Scale [GDS-15] ≥ 5) using a prospective cohort study of 312 drug-naïve patients with newly diagnosed PD during 2-year follow-up from the Parkinson's Progression Markers Initiative (PPMI) database. Established models were assessed with out-of-sample validation and the whole sample was divided into training and testing samples by the ratio of 7:3.
Both XGBoost model and logistic regression model achieved good discrimination and calibration. 2 PD-specific factors (age at onset, duration) and 4 nonspecific factors (baseline GDS-15 score, State Trait Anxiety Inventory [STAI] score, Rapid Eye Movement Sleep Behavior Disorder Screening Questionnaire [RBDSQ] score, and history of depression) were identified as important predictors by two models.
Access to several variables was limited by database.
In this longitudinal study, we developed promising tools to provide personalized estimates of depression in early PD and studied the relative contribution of PD-specific and nonspecific predictors, constituting a substantial addition to the current understanding of dPD.
[Display omitted]</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>32158001</pmid><doi>10.1016/j.jad.2020.02.046</doi><tpages>9</tpages></addata></record> |
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subjects | Aged Depression Depression - diagnosis Depression - epidemiology Humans Longitudinal Studies Machine learning Parkinson Disease - complications Parkinson's disease Prediction model Prospective Studies Quality of Life |
title | Personalized prediction of depression in patients with newly diagnosed Parkinson's disease: A prospective cohort study |
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