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Tetracycline degradation by Klebsiella sp. strain TR5: Proposed degradation pathway and possible genes involved
Microorganisms with high tetracycline (TC) degradation efficiencies are required for biological processes for TC-containing wastewater treatment. With multiple enrichment cultures, a TC-degrading strain TR5 was isolated from chicken manure mixture in a large broiler farm, which was identified as Kle...
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Published in: | Chemosphere (Oxford) 2020-08, Vol.253, p.126729-126729, Article 126729 |
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description | Microorganisms with high tetracycline (TC) degradation efficiencies are required for biological processes for TC-containing wastewater treatment. With multiple enrichment cultures, a TC-degrading strain TR5 was isolated from chicken manure mixture in a large broiler farm, which was identified as Klebsiella pneumoniae by 16S rRNA gene sequencing and biochemical properties. Strain TR5 could degrade TC quickly (∼90% within 36 h) with the initial TC concentration of 200 mg/L under optimized conditions via single-factor experiment coupled with RSM. Strain TR5 could detoxify TC and generate much less toxic products as long as cultured more than one day. Three TC-degrading pathways were proposed based on 8 possible products. A transformant containing a plasmid from TR5 acquired TC-degrading ability, indicating that TC-degrading genes were located on this plasmid. Complete sequencing of pYK5 showed that isomerase-, oxidoreductase-, and transferases-encoding genes were found and were inferred to be involved in TC degradation. TR5 may not degrade TC completely and it can utilize some carbon-containing compounds derived from TC via the effect of formylglutathione hydrolase-encoding gene. Our findings showed that strain TR5 could be a promising agent for wastewater treatment, and genes involved in TC degradation are worthy of further investigations for enzyme preparations development.
•TR5 degrades high concentration of TC quickly (∼90% within 36 h).•TR5 detoxifies TC and generates less toxic products.•TC-degrading pathways are proposed.•Possible genes involved in TC degradation are discussed. |
doi_str_mv | 10.1016/j.chemosphere.2020.126729 |
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•TR5 degrades high concentration of TC quickly (∼90% within 36 h).•TR5 detoxifies TC and generates less toxic products.•TC-degrading pathways are proposed.•Possible genes involved in TC degradation are discussed.</description><subject>Degradation</subject><subject>Klebsiella</subject><subject>Pathway</subject><subject>Plasmid</subject><subject>Tetracycline</subject><issn>0045-6535</issn><issn>1879-1298</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNqNkEtrGzEURkVISZzHXwjKLptx9BiNRt0VkxcJtBR3LfS4jmXGo6k0dvC_r4yTku66Ekjn073fQeiakikltLldTd0S1jEPS0gwZYSVe9ZIpo7QhLZSVZSp9hhNCKlF1QguTtFZzitCSlioE3TKGWtVQ8kExTmMybid60IP2MNrMt6MIfbY7vBzBzYH6DqD8zDFuZChx_Of4iv-keIQM_h_IoMZl29mh03vcXnNwXaAX6GHjEO_jd0W_AX6sjBdhsv38xz9ur-bzx6rl-8PT7NvL5XjUo6Vldb52rGWGF8qC8-oaImV3Foha8GsWRBLuLfS1M5RbpmsOVNuwWqn6tbwc3Rz-HdI8fcG8qjXIbt9lR7iJmvGFaG1bBpaUHVAXSo7J1joIYW1STtNid771iv9ybfe-9YH3yV79T5mY9fg_yY_BBdgdgCglN0GSDq7AL0DHxK4UfsY_mPMH1rbmOE</recordid><startdate>202008</startdate><enddate>202008</enddate><creator>Yin, Zhifeng</creator><creator>Xia, Dan</creator><creator>Shen, Min</creator><creator>Zhu, Dewei</creator><creator>Cai, Haijie</creator><creator>Wu, Meng</creator><creator>Zhu, Qiurong</creator><creator>Kang, Yijun</creator><general>Elsevier Ltd</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>202008</creationdate><title>Tetracycline degradation by Klebsiella sp. strain TR5: Proposed degradation pathway and possible genes involved</title><author>Yin, Zhifeng ; Xia, Dan ; Shen, Min ; Zhu, Dewei ; Cai, Haijie ; Wu, Meng ; Zhu, Qiurong ; Kang, Yijun</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c377t-b7bcd4c280ad1015d21580b73bb57452baf0b03db7a4cc13b274329cf24c948a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Degradation</topic><topic>Klebsiella</topic><topic>Pathway</topic><topic>Plasmid</topic><topic>Tetracycline</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yin, Zhifeng</creatorcontrib><creatorcontrib>Xia, Dan</creatorcontrib><creatorcontrib>Shen, Min</creatorcontrib><creatorcontrib>Zhu, Dewei</creatorcontrib><creatorcontrib>Cai, Haijie</creatorcontrib><creatorcontrib>Wu, Meng</creatorcontrib><creatorcontrib>Zhu, Qiurong</creatorcontrib><creatorcontrib>Kang, Yijun</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Chemosphere (Oxford)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yin, Zhifeng</au><au>Xia, Dan</au><au>Shen, Min</au><au>Zhu, Dewei</au><au>Cai, Haijie</au><au>Wu, Meng</au><au>Zhu, Qiurong</au><au>Kang, Yijun</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Tetracycline degradation by Klebsiella sp. strain TR5: Proposed degradation pathway and possible genes involved</atitle><jtitle>Chemosphere (Oxford)</jtitle><addtitle>Chemosphere</addtitle><date>2020-08</date><risdate>2020</risdate><volume>253</volume><spage>126729</spage><epage>126729</epage><pages>126729-126729</pages><artnum>126729</artnum><issn>0045-6535</issn><eissn>1879-1298</eissn><abstract>Microorganisms with high tetracycline (TC) degradation efficiencies are required for biological processes for TC-containing wastewater treatment. With multiple enrichment cultures, a TC-degrading strain TR5 was isolated from chicken manure mixture in a large broiler farm, which was identified as Klebsiella pneumoniae by 16S rRNA gene sequencing and biochemical properties. Strain TR5 could degrade TC quickly (∼90% within 36 h) with the initial TC concentration of 200 mg/L under optimized conditions via single-factor experiment coupled with RSM. Strain TR5 could detoxify TC and generate much less toxic products as long as cultured more than one day. Three TC-degrading pathways were proposed based on 8 possible products. A transformant containing a plasmid from TR5 acquired TC-degrading ability, indicating that TC-degrading genes were located on this plasmid. Complete sequencing of pYK5 showed that isomerase-, oxidoreductase-, and transferases-encoding genes were found and were inferred to be involved in TC degradation. TR5 may not degrade TC completely and it can utilize some carbon-containing compounds derived from TC via the effect of formylglutathione hydrolase-encoding gene. Our findings showed that strain TR5 could be a promising agent for wastewater treatment, and genes involved in TC degradation are worthy of further investigations for enzyme preparations development.
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subjects | Degradation Klebsiella Pathway Plasmid Tetracycline |
title | Tetracycline degradation by Klebsiella sp. strain TR5: Proposed degradation pathway and possible genes involved |
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