Large-Scale Comparative Analyses of Tick Genomes Elucidate Their Genetic Diversity and Vector Capacities

• Published in: Cell 2020-09, Vol.182 (5), p.1328-1340.e13
• Main Authors: Jia, Na, Wang, Jinfeng, Shi, Wenqiang, Du, Lifeng, Sun, Yi, Zhan, Wei, Jiang, Jia-Fu, Wang, Qian, Zhang, Bing, Ji, Peifeng, Bell-Sakyi, Lesley, Cui, Xiao-Ming, Yuan, Ting-Ting, Jiang, Bao-Gui, Yang, Wei-Fei, Lam, Tommy Tsan-Yuk, Chang, Qiao-Cheng, Ding, Shu-Jun, Wang, Xian-Jun, Zhu, Jin-Guo, Ruan, Xiang-Dong, Zhao, Lin, Wei, Jia-Te, Ye, Run-Ze, Que, Teng Cheng, Du, Chun-Hong, Zhou, Yu-Hao, Cheng, Jing Xia, Dai, Pei-Fang, Guo, Wen-Bin, Han, Xiao-Hu, Huang, En-Jiong, Li, Lian-Feng, Wei, Wei, Gao, Yu-Chi, Liu, Jing-Ze, Shao, Hong-Ze, Wang, Xin, Wang, Chong-Cai, Yang, Tian-Ci, Huo, Qiu-Bo, Li, Wei, Chen, Hai-Ying, Chen, Shen-En, Zhou, Ling-Guo, Ni, Xue-Bing, Tian, Jun-Hua, Sheng, Yue, Liu, Tao, Pan, Yu-Sheng, Xia, Luo-Yuan, Li, Jie, Zhao, Fangqing, Cao, Wu-Chun
• Format: Article
• Language: English
• Subjects: Animals; Cell Line; Disease Vectors; genetic diversity; Genetic Variation - genetics; genome; hematophagy; Host Specificity - genetics; metagenome; tick; Tick-Borne Diseases - microbiology; tick-borne pathogen; Ticks - genetics; vector capacity
• ISSN: 0092-8674; 1097-4172
• DOI: 10.1016/j.cell.2020.07.023

Among arthropod vectors, ticks transmit the most diverse human and animal pathogens, leading to an increasing number of new challenges worldwide. Here we sequenced and assembled high-quality genomes of six ixodid tick species and further resequenced 678 tick specimens to understand three key aspects of ticks: genetic diversity, population structure, and pathogen distribution. We explored the genetic basis common to ticks, including heme and hemoglobin digestion, iron metabolism, and reactive oxygen species, and unveiled for the first time that genetic structure and pathogen composition in different tick species are mainly shaped by ecological and geographic factors. We further identified species-specific determinants associated with different host ranges, life cycles, and distributions. The findings of this study are an invaluable resource for research and control of ticks and tick-borne diseases. [Display omitted] •Six high-quality ixodid tick genomes and 678 re-sequenced tick specimens•Insights into the genetic basis of tick hematophagy and related phenotypes•Population structure and genetic diversity of six tick species•Tick-borne pathogen composition and distribution by metagenome analyses The high-quality genomes of six ixodid tick species and resequencing of 678 tick specimens are a resource to understand the genetic diversity, population structure, and pathogen distribution of ticks with implications for control of ticks and tick-borne diseases.