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Spectroscopic characterization, DFT studies, molecular docking and cytotoxic evaluation of 4‐nitro‐indole‐3‐carboxaldehyde: A potent lung cancer agent
The 4‐nitro‐1H‐indole‐carboxaldehyde (NICA) molecule was characterized experimentally using FT‐IR, FT‐Raman and UV‐Vis spectra, and it was studied theoretically using DFT calculations. The optimized structure of the NICA molecule was determined by DFT calculations using B3LYP functional with cc‐pVTZ...
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Published in: | Journal of molecular recognition 2021-01, Vol.34 (1), p.e2872-n/a |
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description | The 4‐nitro‐1H‐indole‐carboxaldehyde (NICA) molecule was characterized experimentally using FT‐IR, FT‐Raman and UV‐Vis spectra, and it was studied theoretically using DFT calculations. The optimized structure of the NICA molecule was determined by DFT calculations using B3LYP functional with cc‐pVTZ basis set. The electron localization function (ELF) and local orbital localizer (LOL) studies were performed to visualize the electron delocalization in the molecule. The experimental and theoretical wavenumbers of the title molecule were assigned using VEDA 4.0 program. The charge delocalization and stability of the title molecule were investigated using natural bond orbital (NBO) analysis. Frontier molecular orbitals (FMOs) and related molecular properties were calculated. UV‐Vis spectrum was calculated theoretically and validated experimentally. The reactive sites of the molecule were studied from the MEP surface and Fukui function analysis. The molecular docking analysis reveals that the NICA ligand shows better inhibitory activity against RAS, which causes lung cancer. The in vitro cytotoxic activity of the molecule against human lung cancer cell lines (A549) was determined by MTT assay. Thus, the NICA molecule can be used as a potential candidate for the development of the drug against lung cancer. |
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The optimized structure of the NICA molecule was determined by DFT calculations using B3LYP functional with cc‐pVTZ basis set. The electron localization function (ELF) and local orbital localizer (LOL) studies were performed to visualize the electron delocalization in the molecule. The experimental and theoretical wavenumbers of the title molecule were assigned using VEDA 4.0 program. The charge delocalization and stability of the title molecule were investigated using natural bond orbital (NBO) analysis. Frontier molecular orbitals (FMOs) and related molecular properties were calculated. UV‐Vis spectrum was calculated theoretically and validated experimentally. The reactive sites of the molecule were studied from the MEP surface and Fukui function analysis. The molecular docking analysis reveals that the NICA ligand shows better inhibitory activity against RAS, which causes lung cancer. The in vitro cytotoxic activity of the molecule against human lung cancer cell lines (A549) was determined by MTT assay. Thus, the NICA molecule can be used as a potential candidate for the development of the drug against lung cancer.</description><identifier>ISSN: 0952-3499</identifier><identifier>EISSN: 1099-1352</identifier><identifier>DOI: 10.1002/jmr.2872</identifier><identifier>PMID: 32815220</identifier><language>eng</language><publisher>England: Wiley Subscription Services, Inc</publisher><subject>4‐nitro‐indole‐3‐carboxaldehyde ; A549 ; A549 Cells ; Antineoplastic Agents - pharmacology ; Cytotoxicity ; Density Functional Theory ; ELF ; Fukui function ; Function analysis ; Humans ; Indoles ; Localization ; Lung cancer ; Lung Neoplasms - drug therapy ; Mathematical analysis ; Molecular docking ; Molecular Docking Simulation ; Molecular orbitals ; Molecular structure ; MTT assay ; Spectrophotometry, Ultraviolet ; Spectroscopy, Fourier Transform Infrared ; Spectrum Analysis, Raman ; Tumor cell lines</subject><ispartof>Journal of molecular recognition, 2021-01, Vol.34 (1), p.e2872-n/a</ispartof><rights>2020 John Wiley & Sons Ltd</rights><rights>2020 John Wiley & Sons Ltd.</rights><rights>2020 John Wiley & Sons, Ltd.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2642-2e8ec9b50af1919efbbfbd4dcc0acdbe39e1a23e1db9e5f36a5f00587d1811593</citedby><cites>FETCH-LOGICAL-c2642-2e8ec9b50af1919efbbfbd4dcc0acdbe39e1a23e1db9e5f36a5f00587d1811593</cites><orcidid>0000-0001-7235-2310</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32815220$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Christopher Jeyaseelan, S.</creatorcontrib><creatorcontrib>Milton Franklin Benial, A.</creatorcontrib><title>Spectroscopic characterization, DFT studies, molecular docking and cytotoxic evaluation of 4‐nitro‐indole‐3‐carboxaldehyde: A potent lung cancer agent</title><title>Journal of molecular recognition</title><addtitle>J Mol Recognit</addtitle><description>The 4‐nitro‐1H‐indole‐carboxaldehyde (NICA) molecule was characterized experimentally using FT‐IR, FT‐Raman and UV‐Vis spectra, and it was studied theoretically using DFT calculations. The optimized structure of the NICA molecule was determined by DFT calculations using B3LYP functional with cc‐pVTZ basis set. The electron localization function (ELF) and local orbital localizer (LOL) studies were performed to visualize the electron delocalization in the molecule. The experimental and theoretical wavenumbers of the title molecule were assigned using VEDA 4.0 program. The charge delocalization and stability of the title molecule were investigated using natural bond orbital (NBO) analysis. Frontier molecular orbitals (FMOs) and related molecular properties were calculated. UV‐Vis spectrum was calculated theoretically and validated experimentally. The reactive sites of the molecule were studied from the MEP surface and Fukui function analysis. The molecular docking analysis reveals that the NICA ligand shows better inhibitory activity against RAS, which causes lung cancer. The in vitro cytotoxic activity of the molecule against human lung cancer cell lines (A549) was determined by MTT assay. Thus, the NICA molecule can be used as a potential candidate for the development of the drug against lung cancer.</description><subject>4‐nitro‐indole‐3‐carboxaldehyde</subject><subject>A549</subject><subject>A549 Cells</subject><subject>Antineoplastic Agents - pharmacology</subject><subject>Cytotoxicity</subject><subject>Density Functional Theory</subject><subject>ELF</subject><subject>Fukui function</subject><subject>Function analysis</subject><subject>Humans</subject><subject>Indoles</subject><subject>Localization</subject><subject>Lung cancer</subject><subject>Lung Neoplasms - drug therapy</subject><subject>Mathematical analysis</subject><subject>Molecular docking</subject><subject>Molecular Docking Simulation</subject><subject>Molecular orbitals</subject><subject>Molecular structure</subject><subject>MTT assay</subject><subject>Spectrophotometry, Ultraviolet</subject><subject>Spectroscopy, Fourier Transform Infrared</subject><subject>Spectrum Analysis, Raman</subject><subject>Tumor cell lines</subject><issn>0952-3499</issn><issn>1099-1352</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp1kctu1TAQhi0EooeCxBMgS2xYNMWXOCdmVxXKRUVIUNaRM560PjhxajvQw4pH4Al4OJ4E9wJISCyssexvPo3mJ-QhZ_ucMfF0M8Z90a7FLbLiTOuKSyVukxXTSlSy1nqH3Etpw1j5U-wu2ZGi5UoItiI_PswIOYYEYXZA4cxEAxmj-2qyC9MefX50QlNerMO0R8fgERZvIrUBPrnplJrJUtjmkMNFacfPxi9XjTQMtP757fvkirxUN9nSWy6yHDCxDxfGWzzbWnxGD-gcMk6Z-qUowUyAkZrT8nKf3BmMT_jgpu6Sj0cvTg5fVcfvXr4-PDiuQDS1qAS2CLpXzAxcc41D3w-9rS0AM2B7lBq5ERK57TWqQTZGDYypdm15y7nScpc8ufbOMZwvmHI3ugTovZkwLKkTtVRr1TRaFvTxP-gmLHEq0xWqaeS6LL_9K4Sy2xRx6OboRhO3HWfdZWZdyay7zKygj26ESz-i_QP-DqkA1TXwxXnc_lfUvXn7_kr4C3xFp1I</recordid><startdate>202101</startdate><enddate>202101</enddate><creator>Christopher Jeyaseelan, S.</creator><creator>Milton Franklin Benial, A.</creator><general>Wiley Subscription Services, Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QF</scope><scope>7QO</scope><scope>7QP</scope><scope>7QQ</scope><scope>7SE</scope><scope>7SR</scope><scope>7TA</scope><scope>7TK</scope><scope>7TM</scope><scope>8BQ</scope><scope>8FD</scope><scope>F28</scope><scope>FR3</scope><scope>H8G</scope><scope>JG9</scope><scope>P64</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-7235-2310</orcidid></search><sort><creationdate>202101</creationdate><title>Spectroscopic characterization, DFT studies, molecular docking and cytotoxic evaluation of 4‐nitro‐indole‐3‐carboxaldehyde: A potent lung cancer agent</title><author>Christopher Jeyaseelan, S. ; Milton Franklin Benial, A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2642-2e8ec9b50af1919efbbfbd4dcc0acdbe39e1a23e1db9e5f36a5f00587d1811593</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>4‐nitro‐indole‐3‐carboxaldehyde</topic><topic>A549</topic><topic>A549 Cells</topic><topic>Antineoplastic Agents - pharmacology</topic><topic>Cytotoxicity</topic><topic>Density Functional Theory</topic><topic>ELF</topic><topic>Fukui function</topic><topic>Function analysis</topic><topic>Humans</topic><topic>Indoles</topic><topic>Localization</topic><topic>Lung cancer</topic><topic>Lung Neoplasms - drug therapy</topic><topic>Mathematical analysis</topic><topic>Molecular docking</topic><topic>Molecular Docking Simulation</topic><topic>Molecular orbitals</topic><topic>Molecular structure</topic><topic>MTT assay</topic><topic>Spectrophotometry, Ultraviolet</topic><topic>Spectroscopy, Fourier Transform Infrared</topic><topic>Spectrum Analysis, Raman</topic><topic>Tumor cell lines</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Christopher Jeyaseelan, S.</creatorcontrib><creatorcontrib>Milton Franklin Benial, A.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Aluminium Industry Abstracts</collection><collection>Biotechnology Research Abstracts</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Ceramic Abstracts</collection><collection>Corrosion Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Materials Business File</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>ANTE: Abstracts in New Technology & Engineering</collection><collection>Engineering Research Database</collection><collection>Copper Technical Reference Library</collection><collection>Materials Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of molecular recognition</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Christopher Jeyaseelan, S.</au><au>Milton Franklin Benial, A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Spectroscopic characterization, DFT studies, molecular docking and cytotoxic evaluation of 4‐nitro‐indole‐3‐carboxaldehyde: A potent lung cancer agent</atitle><jtitle>Journal of molecular recognition</jtitle><addtitle>J Mol Recognit</addtitle><date>2021-01</date><risdate>2021</risdate><volume>34</volume><issue>1</issue><spage>e2872</spage><epage>n/a</epage><pages>e2872-n/a</pages><issn>0952-3499</issn><eissn>1099-1352</eissn><abstract>The 4‐nitro‐1H‐indole‐carboxaldehyde (NICA) molecule was characterized experimentally using FT‐IR, FT‐Raman and UV‐Vis spectra, and it was studied theoretically using DFT calculations. The optimized structure of the NICA molecule was determined by DFT calculations using B3LYP functional with cc‐pVTZ basis set. The electron localization function (ELF) and local orbital localizer (LOL) studies were performed to visualize the electron delocalization in the molecule. The experimental and theoretical wavenumbers of the title molecule were assigned using VEDA 4.0 program. The charge delocalization and stability of the title molecule were investigated using natural bond orbital (NBO) analysis. Frontier molecular orbitals (FMOs) and related molecular properties were calculated. UV‐Vis spectrum was calculated theoretically and validated experimentally. The reactive sites of the molecule were studied from the MEP surface and Fukui function analysis. The molecular docking analysis reveals that the NICA ligand shows better inhibitory activity against RAS, which causes lung cancer. 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subjects | 4‐nitro‐indole‐3‐carboxaldehyde A549 A549 Cells Antineoplastic Agents - pharmacology Cytotoxicity Density Functional Theory ELF Fukui function Function analysis Humans Indoles Localization Lung cancer Lung Neoplasms - drug therapy Mathematical analysis Molecular docking Molecular Docking Simulation Molecular orbitals Molecular structure MTT assay Spectrophotometry, Ultraviolet Spectroscopy, Fourier Transform Infrared Spectrum Analysis, Raman Tumor cell lines |
title | Spectroscopic characterization, DFT studies, molecular docking and cytotoxic evaluation of 4‐nitro‐indole‐3‐carboxaldehyde: A potent lung cancer agent |
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