Complete chloroplast genome of Corylopsis spicata and phylogenetic analysis

The complete plastid genome of Corylopsis spicata was sequenced and analyzed in this study. It was found to be 159,507 bp and consisted of a large (88,243 bp) and small (18,716 bp) single-copy regions, separated by a pair of identical inverted repeats (26,274 bp). The GC content of the whole genome...

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Bibliographic Details
Published in:Mitochondrial DNA. Part B. Resources 2019-07, Vol.4 (2), p.2700-2701
Main Authors: Kim, Sang-Chul, Shin, Sookyung, Ahn, Ji-Young, Lee, Jei-Wan
Format: Article
Language:English
Subjects:
Chloroplasts
complete chloroplast genome
Corylopsis spicata
Gene order
Genomes
Hamamelidaceae
Mitogenome Announcement
phylogenetic analysis
Phylogenetics
Phylogeny
rRNA
tRNA
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Summary:The complete plastid genome of Corylopsis spicata was sequenced and analyzed in this study. It was found to be 159,507 bp and consisted of a large (88,243 bp) and small (18,716 bp) single-copy regions, separated by a pair of identical inverted repeats (26,274 bp). The GC content of the whole genome was 36.9%, and there were 85 unique protein-coding genes, 37 tRNA, and eight rRNA. The gene order and organization were consistent with those of other complete plastid genomes from the Hamamelidaceae. A phylogenetic tree was constructed based on 76 protein-coding genes that demonstrated a sister relationship within the genus Corylopsis.
ISSN:2380-2359
2380-2359
DOI:10.1080/23802359.2019.1644223