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Relationship Between Peat Type and Microbial Ecology in Sphagnum-Containing Peatlands of the Adirondack Mountains, NY, USA
Peatland microbial community composition varies with respect to a range of biological and physicochemical variables. While the extent of peat degradation (humification) has been linked to microbial community composition along vertical stratification gradients within peatland sites, across-site varia...
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Published in: | Microbial ecology 2021-08, Vol.82 (2), p.429-441 |
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container_title | Microbial ecology |
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creator | St. James, Andrew R. Lin, Janni Richardson, Ruth E. |
description | Peatland microbial community composition varies with respect to a range of biological and physicochemical variables. While the extent of peat degradation (humification) has been linked to microbial community composition along vertical stratification gradients within peatland sites, across-site variations have been relatively unexplored. In this study, we compared microbial communities across ten pristine
Sphagnum
-containing peatlands in the Adirondack Mountains, NY, which represented three different peat types—humic fen peat, humic bog peat, and fibric bog peat. Using 16S amplicon sequencing and network correlation analysis, we demonstrate that microbial community composition is primarily linked to peat type, and that distinct taxa networks distinguish microbial communities in each type. Shotgun metagenomic sequencing of the active water table region (mesotelm) from two
Sphagnum
-dominated bogs—one with fibric peat and one with humic peat—revealed differences in primary carbon degradation pathways, with the fibric peat being dominated by carbohydrate metabolism and hydrogenotrophic methanogenesis, and the humic peat being dominated by aliphatic carbon metabolism and aceticlastic methanogenesis. Our results suggest that peat humification is a major factor driving microbial community dynamics across peatland ecosystems. |
doi_str_mv | 10.1007/s00248-020-01651-1 |
format | article |
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Sphagnum
-containing peatlands in the Adirondack Mountains, NY, which represented three different peat types—humic fen peat, humic bog peat, and fibric bog peat. Using 16S amplicon sequencing and network correlation analysis, we demonstrate that microbial community composition is primarily linked to peat type, and that distinct taxa networks distinguish microbial communities in each type. Shotgun metagenomic sequencing of the active water table region (mesotelm) from two
Sphagnum
-dominated bogs—one with fibric peat and one with humic peat—revealed differences in primary carbon degradation pathways, with the fibric peat being dominated by carbohydrate metabolism and hydrogenotrophic methanogenesis, and the humic peat being dominated by aliphatic carbon metabolism and aceticlastic methanogenesis. Our results suggest that peat humification is a major factor driving microbial community dynamics across peatland ecosystems.</description><identifier>ISSN: 0095-3628</identifier><identifier>EISSN: 1432-184X</identifier><identifier>DOI: 10.1007/s00248-020-01651-1</identifier><identifier>PMID: 33410936</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Biomedical and Life Sciences ; Bogs ; Carbohydrate metabolism ; Carbohydrates ; Carbon ; Community composition ; Composition ; Correlation analysis ; Degradation ; Ecology ; Geoecology/Natural Processes ; Groundwater table ; Humification ; Life Sciences ; Metabolism ; Metagenomics ; Methanogenesis ; Microbial activity ; Microbial Ecology ; Microbiology ; Microorganisms ; Mountains ; Nature Conservation ; Peat ; Peatlands ; Sequencing ; Soil Microbiology ; Sphagnum ; Stratification ; Vertical distribution ; Water Quality/Water Pollution ; Water table</subject><ispartof>Microbial ecology, 2021-08, Vol.82 (2), p.429-441</ispartof><rights>Springer Science+Business Media, LLC, part of Springer Nature 2021</rights><rights>Springer Science+Business Media, LLC, part of Springer Nature 2021.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c375t-ed371f9fbcb2946d5d57793ba6d69073b63193373639c01fe11a3401fe555f9a3</citedby><cites>FETCH-LOGICAL-c375t-ed371f9fbcb2946d5d57793ba6d69073b63193373639c01fe11a3401fe555f9a3</cites><orcidid>0000-0002-5607-2789</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33410936$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>St. James, Andrew R.</creatorcontrib><creatorcontrib>Lin, Janni</creatorcontrib><creatorcontrib>Richardson, Ruth E.</creatorcontrib><title>Relationship Between Peat Type and Microbial Ecology in Sphagnum-Containing Peatlands of the Adirondack Mountains, NY, USA</title><title>Microbial ecology</title><addtitle>Microb Ecol</addtitle><addtitle>Microb Ecol</addtitle><description>Peatland microbial community composition varies with respect to a range of biological and physicochemical variables. While the extent of peat degradation (humification) has been linked to microbial community composition along vertical stratification gradients within peatland sites, across-site variations have been relatively unexplored. In this study, we compared microbial communities across ten pristine
Sphagnum
-containing peatlands in the Adirondack Mountains, NY, which represented three different peat types—humic fen peat, humic bog peat, and fibric bog peat. Using 16S amplicon sequencing and network correlation analysis, we demonstrate that microbial community composition is primarily linked to peat type, and that distinct taxa networks distinguish microbial communities in each type. Shotgun metagenomic sequencing of the active water table region (mesotelm) from two
Sphagnum
-dominated bogs—one with fibric peat and one with humic peat—revealed differences in primary carbon degradation pathways, with the fibric peat being dominated by carbohydrate metabolism and hydrogenotrophic methanogenesis, and the humic peat being dominated by aliphatic carbon metabolism and aceticlastic methanogenesis. Our results suggest that peat humification is a major factor driving microbial community dynamics across peatland ecosystems.</description><subject>Biomedical and Life Sciences</subject><subject>Bogs</subject><subject>Carbohydrate metabolism</subject><subject>Carbohydrates</subject><subject>Carbon</subject><subject>Community composition</subject><subject>Composition</subject><subject>Correlation analysis</subject><subject>Degradation</subject><subject>Ecology</subject><subject>Geoecology/Natural Processes</subject><subject>Groundwater table</subject><subject>Humification</subject><subject>Life Sciences</subject><subject>Metabolism</subject><subject>Metagenomics</subject><subject>Methanogenesis</subject><subject>Microbial activity</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>Microorganisms</subject><subject>Mountains</subject><subject>Nature Conservation</subject><subject>Peat</subject><subject>Peatlands</subject><subject>Sequencing</subject><subject>Soil Microbiology</subject><subject>Sphagnum</subject><subject>Stratification</subject><subject>Vertical distribution</subject><subject>Water Quality/Water Pollution</subject><subject>Water 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Between Peat Type and Microbial Ecology in Sphagnum-Containing Peatlands of the Adirondack Mountains, NY, USA</title><author>St. James, Andrew R. ; Lin, Janni ; Richardson, Ruth E.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c375t-ed371f9fbcb2946d5d57793ba6d69073b63193373639c01fe11a3401fe555f9a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Biomedical and Life Sciences</topic><topic>Bogs</topic><topic>Carbohydrate metabolism</topic><topic>Carbohydrates</topic><topic>Carbon</topic><topic>Community composition</topic><topic>Composition</topic><topic>Correlation analysis</topic><topic>Degradation</topic><topic>Ecology</topic><topic>Geoecology/Natural Processes</topic><topic>Groundwater table</topic><topic>Humification</topic><topic>Life Sciences</topic><topic>Metabolism</topic><topic>Metagenomics</topic><topic>Methanogenesis</topic><topic>Microbial 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Sphagnum
-containing peatlands in the Adirondack Mountains, NY, which represented three different peat types—humic fen peat, humic bog peat, and fibric bog peat. Using 16S amplicon sequencing and network correlation analysis, we demonstrate that microbial community composition is primarily linked to peat type, and that distinct taxa networks distinguish microbial communities in each type. Shotgun metagenomic sequencing of the active water table region (mesotelm) from two
Sphagnum
-dominated bogs—one with fibric peat and one with humic peat—revealed differences in primary carbon degradation pathways, with the fibric peat being dominated by carbohydrate metabolism and hydrogenotrophic methanogenesis, and the humic peat being dominated by aliphatic carbon metabolism and aceticlastic methanogenesis. Our results suggest that peat humification is a major factor driving microbial community dynamics across peatland ecosystems.</abstract><cop>New York</cop><pub>Springer US</pub><pmid>33410936</pmid><doi>10.1007/s00248-020-01651-1</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0002-5607-2789</orcidid></addata></record> |
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subjects | Biomedical and Life Sciences Bogs Carbohydrate metabolism Carbohydrates Carbon Community composition Composition Correlation analysis Degradation Ecology Geoecology/Natural Processes Groundwater table Humification Life Sciences Metabolism Metagenomics Methanogenesis Microbial activity Microbial Ecology Microbiology Microorganisms Mountains Nature Conservation Peat Peatlands Sequencing Soil Microbiology Sphagnum Stratification Vertical distribution Water Quality/Water Pollution Water table |
title | Relationship Between Peat Type and Microbial Ecology in Sphagnum-Containing Peatlands of the Adirondack Mountains, NY, USA |
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