Clinical validation of 13‐gene DNA methylation analysis in oral brushing samples for detection of oral carcinoma: Italian multicenter study

• Published in: Head & neck 2021-05, Vol.43 (5), p.1563-1573
• Main Authors: Gissi, Davide B., Morandi, Luca, Colella, Giuseppe, De Luca, Roberto, Campisi, Giuseppina, Mauceri, Rodolfo, Romeo, Umberto, Tenore, Gianluca, Mignogna, Michele D., Adamo, Daniela, Oteri, Giacomo, Marcianò, Antonia, Vescovi, Paolo, Meleti, Marco, Serpico, Rosario, Di Stasio, Dario, Pentenero, Monica, Santarelli, Andrea, Bianchi, Alberto, Crimi, Salvatore, Marchetti, Claudio, Tarsitano, Achille, Foschini, Maria Pia, Montebugnoli, Lucio
• Format: Article
• Language: English
• Subjects: algorithm; bisulfite sequencing; Blindness; Deoxyribonucleic acid; diagnostic test; DNA; DNA methylation; Head and neck; oral brushing; Oral cancer; Oral carcinoma; Oral squamous cell carcinoma; quantitative DNA methylation analysis; Squamous cell carcinoma
• ISSN: 1043-3074; 1097-0347
• DOI: 10.1002/hed.26624

Background The aim of this Italian multicenter study was to evaluate the diagnostic performance of a minimally invasive method for the detection of oral squamous cell carcinoma (OSCC) based on 13‐gene DNA methylation analysis in oral brushing samples. Methods Oral brushing specimens were collected in 11 oral medicine centers across Italy. Twenty brushing specimens were collected by each center, 10 from patients with OSCC, and 10 from healthy volunteers. DNA methylation analysis was performed in blindness, and each sample was determined as positive or negative based on a predefined cutoff value. Results DNA amplification failed in 4 of 220 (1.8%) samples. Of the specimens derived from patients with OSCC, 93.6% (103/110) were detected as positive, and 84.9% (90/106) of the samples from healthy volunteers were negative. Conclusion These data confirmed the diagnostic performance of our novel procedure in a large cohort of brushing specimens collected from 11 different centers and analyzed in blindness.