A Hyperspectral Library of Foliar Diseases of Wheat

• Published in: Phytopathology 2021-09, Vol.111 (9), p.1583-1593
• Main Authors: Bohnenkamp, David, Behmann, Jan, Paulus, Stefan, Steiner, Ulrike, Mahlein, Anne-Katrin
• Format: Article
• Language: English
• Subjects: Plant Diseases; Triticum
• ISSN: 0031-949X; 1943-7684
• DOI: 10.1094/PHYTO-09-19-0335-R

This work established a hyperspectral library of important foliar diseases of wheat induced by different fungal pathogens, representing a time series from infection to symptom appearance for the purpose of detecting spectral changes. The data were generated under controlled conditions at the leaf scale. The transition from healthy to diseased leaf tissue was assessed, and spectral shifts were identified and used in combination with histological investigations to define developmental stages in pathogenesis for each disease. The spectral signatures of each plant disease that indicate a specific developmental stage during pathogenesis, defined as turning points, were combined into a spectral library. Machine learning analysis methods were applied and compared to test the potential of this library to detect and quantify foliar diseases in hyperspectral images. All evaluated classifiers had high accuracy (≤99%) for the detection and identification of both biotrophic and necrotrophic fungi. The potential of applying spectral analysis methods in combination with a spectral library for the detection and identification of plant diseases is demonstrated. Further evaluation and development of these algorithms should contribute to a robust detection and identification system for plant diseases at different developmental stages and the promotion and development of site-specific management techniques for plant diseases under field conditions.