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Sensitivity and specificity of piroplasm indirect fluorescent antibody test and PCR for Theileria annulata infection in clinically asymptomatic large ruminants using Bayesian latent class analysis
There is limited information about the accuracy of molecular and serological diagnostic assays for tropical theileriosis in asymptomatic carrier large ruminants. This study has estimated the sensitivity (Se) and specificity (Sp) of PCR and an indirect fluorescent antibody test (IFAT) in the diagnosi...
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Published in: | Veterinary parasitology (Amsterdam) 2021-04, Vol.24, p.100563-100563, Article 100563 |
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description | There is limited information about the accuracy of molecular and serological diagnostic assays for tropical theileriosis in asymptomatic carrier large ruminants. This study has estimated the sensitivity (Se) and specificity (Sp) of PCR and an indirect fluorescent antibody test (IFAT) in the diagnosis of tropical theileriosis in cattle and buffaloes via a Bayesian latent class analysis (BLCA) framework. Blood samples were collected from 70 cattle and water buffaloes (Bubalus bubalis) raised under a smallholder production system in different Egyptian localities. T. annulata infection status was detected by PCR, and IFAT and the test results were subjected to BLCA without assuming the existence of a reference test. Our findings showed that the performance of PCR was superior to that of IFAT. PCR showed a higher Se [0.83 (95% PCI: 0.63–0.98)] in comparison to IFAT [0.72 (95% PCI: 0.68–0.75)]. Similarly, PCR showed a higher Sp [0.95 (95% PCI: 0.77–1.00)] than IFAT [0.82 (95% PCI: 0.80–0.84)]. Se and Sp of the two tests did not differ by species implying that the diagnostics' performance for T. annulata infection in bovines is the same regardless of the species under consideration.
In conclusion, PCR outperforms IFAT in the detection of T. annulata infection and can thus be applied to routine control of tropical theileriosis in endemic situations where cattle and buffaloes are kept under traditional smallholder production systems.
•Bayesian analysis was used for estimation accuracy of PCR and IFAT for theileriosis•PCR was superior to IFAT and thus lends itself to control of bovine theileriosis•Sensitivity and specificity of PCR and IFAT did not differ by bovine species•PCR can support assessment of carrier status of T. annulata in large ruminants |
doi_str_mv | 10.1016/j.vprsr.2021.100563 |
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In conclusion, PCR outperforms IFAT in the detection of T. annulata infection and can thus be applied to routine control of tropical theileriosis in endemic situations where cattle and buffaloes are kept under traditional smallholder production systems.
•Bayesian analysis was used for estimation accuracy of PCR and IFAT for theileriosis•PCR was superior to IFAT and thus lends itself to control of bovine theileriosis•Sensitivity and specificity of PCR and IFAT did not differ by bovine species•PCR can support assessment of carrier status of T. annulata in large ruminants</description><identifier>ISSN: 2405-9390</identifier><identifier>EISSN: 2405-9390</identifier><identifier>DOI: 10.1016/j.vprsr.2021.100563</identifier><identifier>PMID: 34024379</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Animals ; Bayes Theorem ; Bayesian modeling ; Buffaloes ; Carriers ; Cattle ; Indirect fluorescent antibody test ; Latent Class Analysis ; Percutaneous Coronary Intervention - veterinary ; Polymerase Chain Reaction - veterinary ; Sensitivity ; Specificity ; Theileria annulata - genetics ; Tropical theileriosis</subject><ispartof>Veterinary parasitology (Amsterdam), 2021-04, Vol.24, p.100563-100563, Article 100563</ispartof><rights>2021 Elsevier B.V.</rights><rights>Copyright © 2021 Elsevier B.V. All rights reserved.</rights><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c359t-f93c7fb771ec0a6c8a589eb60ecabee1ad1f1a13d7558db2b6ae218e11b652d53</citedby><cites>FETCH-LOGICAL-c359t-f93c7fb771ec0a6c8a589eb60ecabee1ad1f1a13d7558db2b6ae218e11b652d53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34024379$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>El Damaty, Hend M.</creatorcontrib><creatorcontrib>Yousef, Sarah G.</creatorcontrib><creatorcontrib>Mahmmod, Yasser S.</creatorcontrib><creatorcontrib>El-Balkemy, Farouk A.</creatorcontrib><creatorcontrib>Mweu, Marshal M.</creatorcontrib><title>Sensitivity and specificity of piroplasm indirect fluorescent antibody test and PCR for Theileria annulata infection in clinically asymptomatic large ruminants using Bayesian latent class analysis</title><title>Veterinary parasitology (Amsterdam)</title><addtitle>Vet Parasitol Reg Stud Reports</addtitle><description>There is limited information about the accuracy of molecular and serological diagnostic assays for tropical theileriosis in asymptomatic carrier large ruminants. This study has estimated the sensitivity (Se) and specificity (Sp) of PCR and an indirect fluorescent antibody test (IFAT) in the diagnosis of tropical theileriosis in cattle and buffaloes via a Bayesian latent class analysis (BLCA) framework. Blood samples were collected from 70 cattle and water buffaloes (Bubalus bubalis) raised under a smallholder production system in different Egyptian localities. T. annulata infection status was detected by PCR, and IFAT and the test results were subjected to BLCA without assuming the existence of a reference test. Our findings showed that the performance of PCR was superior to that of IFAT. PCR showed a higher Se [0.83 (95% PCI: 0.63–0.98)] in comparison to IFAT [0.72 (95% PCI: 0.68–0.75)]. Similarly, PCR showed a higher Sp [0.95 (95% PCI: 0.77–1.00)] than IFAT [0.82 (95% PCI: 0.80–0.84)]. Se and Sp of the two tests did not differ by species implying that the diagnostics' performance for T. annulata infection in bovines is the same regardless of the species under consideration.
In conclusion, PCR outperforms IFAT in the detection of T. annulata infection and can thus be applied to routine control of tropical theileriosis in endemic situations where cattle and buffaloes are kept under traditional smallholder production systems.
•Bayesian analysis was used for estimation accuracy of PCR and IFAT for theileriosis•PCR was superior to IFAT and thus lends itself to control of bovine theileriosis•Sensitivity and specificity of PCR and IFAT did not differ by bovine species•PCR can support assessment of carrier status of T. annulata in large ruminants</description><subject>Animals</subject><subject>Bayes Theorem</subject><subject>Bayesian modeling</subject><subject>Buffaloes</subject><subject>Carriers</subject><subject>Cattle</subject><subject>Indirect fluorescent antibody test</subject><subject>Latent Class Analysis</subject><subject>Percutaneous Coronary Intervention - veterinary</subject><subject>Polymerase Chain Reaction - veterinary</subject><subject>Sensitivity</subject><subject>Specificity</subject><subject>Theileria annulata - genetics</subject><subject>Tropical theileriosis</subject><issn>2405-9390</issn><issn>2405-9390</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp9UUtv1DAQjhCIVqW_AAn5yGUXP9bJ5sABVrykSiAoZ2viTMqsHDvYzkr5f_wwvE1BnDh5PP4eM_6q6rngW8FF_eq4PU0xxa3kUpQO17V6VF3KHdebVrX88T_1RXWd0pHzQmtEW-un1YXacblTTXtZ_fqGPlGmE-WFge9ZmtDSQPZ8DwObKIbJQRoZ-Z4i2swGN4eIyaLPhZGpC_3CMqZ8z_9y-MqGENntDySHkaB0_ewgQ1EYCp-CLxWzjjxZcK7YpmWcchghk2UO4h2yOI_ki3hicyJ_x97CgonAl-d89rVlpFSUwS2J0rPqyQAu4fXDeVV9f__u9vBxc_P5w6fDm5uNVbrNm6FVthm6phFoOdR2D3rfYldztNAhCujFIECovtF633eyqwGl2KMQXa1lr9VV9XLVnWL4OZeNzUjlH5wDj2FORmol9E4JKQtUrVAbQ0oRBzNFGiEuRnBzTtAczX2C5pygWRMsrBcPBnM3Yv-X8yevAni9ArCseSKMJllCb3HNxvSB_mvwG85HtMw</recordid><startdate>202104</startdate><enddate>202104</enddate><creator>El Damaty, Hend M.</creator><creator>Yousef, Sarah G.</creator><creator>Mahmmod, Yasser S.</creator><creator>El-Balkemy, Farouk A.</creator><creator>Mweu, Marshal M.</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>202104</creationdate><title>Sensitivity and specificity of piroplasm indirect fluorescent antibody test and PCR for Theileria annulata infection in clinically asymptomatic large ruminants using Bayesian latent class analysis</title><author>El Damaty, Hend M. ; Yousef, Sarah G. ; Mahmmod, Yasser S. ; El-Balkemy, Farouk A. ; Mweu, Marshal M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c359t-f93c7fb771ec0a6c8a589eb60ecabee1ad1f1a13d7558db2b6ae218e11b652d53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Animals</topic><topic>Bayes Theorem</topic><topic>Bayesian modeling</topic><topic>Buffaloes</topic><topic>Carriers</topic><topic>Cattle</topic><topic>Indirect fluorescent antibody test</topic><topic>Latent Class Analysis</topic><topic>Percutaneous Coronary Intervention - veterinary</topic><topic>Polymerase Chain Reaction - veterinary</topic><topic>Sensitivity</topic><topic>Specificity</topic><topic>Theileria annulata - genetics</topic><topic>Tropical theileriosis</topic><toplevel>online_resources</toplevel><creatorcontrib>El Damaty, Hend M.</creatorcontrib><creatorcontrib>Yousef, Sarah G.</creatorcontrib><creatorcontrib>Mahmmod, Yasser S.</creatorcontrib><creatorcontrib>El-Balkemy, Farouk A.</creatorcontrib><creatorcontrib>Mweu, Marshal M.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Veterinary parasitology (Amsterdam)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>El Damaty, Hend M.</au><au>Yousef, Sarah G.</au><au>Mahmmod, Yasser S.</au><au>El-Balkemy, Farouk A.</au><au>Mweu, Marshal M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Sensitivity and specificity of piroplasm indirect fluorescent antibody test and PCR for Theileria annulata infection in clinically asymptomatic large ruminants using Bayesian latent class analysis</atitle><jtitle>Veterinary parasitology (Amsterdam)</jtitle><addtitle>Vet Parasitol Reg Stud Reports</addtitle><date>2021-04</date><risdate>2021</risdate><volume>24</volume><spage>100563</spage><epage>100563</epage><pages>100563-100563</pages><artnum>100563</artnum><issn>2405-9390</issn><eissn>2405-9390</eissn><abstract>There is limited information about the accuracy of molecular and serological diagnostic assays for tropical theileriosis in asymptomatic carrier large ruminants. This study has estimated the sensitivity (Se) and specificity (Sp) of PCR and an indirect fluorescent antibody test (IFAT) in the diagnosis of tropical theileriosis in cattle and buffaloes via a Bayesian latent class analysis (BLCA) framework. Blood samples were collected from 70 cattle and water buffaloes (Bubalus bubalis) raised under a smallholder production system in different Egyptian localities. T. annulata infection status was detected by PCR, and IFAT and the test results were subjected to BLCA without assuming the existence of a reference test. Our findings showed that the performance of PCR was superior to that of IFAT. PCR showed a higher Se [0.83 (95% PCI: 0.63–0.98)] in comparison to IFAT [0.72 (95% PCI: 0.68–0.75)]. Similarly, PCR showed a higher Sp [0.95 (95% PCI: 0.77–1.00)] than IFAT [0.82 (95% PCI: 0.80–0.84)]. Se and Sp of the two tests did not differ by species implying that the diagnostics' performance for T. annulata infection in bovines is the same regardless of the species under consideration.
In conclusion, PCR outperforms IFAT in the detection of T. annulata infection and can thus be applied to routine control of tropical theileriosis in endemic situations where cattle and buffaloes are kept under traditional smallholder production systems.
•Bayesian analysis was used for estimation accuracy of PCR and IFAT for theileriosis•PCR was superior to IFAT and thus lends itself to control of bovine theileriosis•Sensitivity and specificity of PCR and IFAT did not differ by bovine species•PCR can support assessment of carrier status of T. annulata in large ruminants</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>34024379</pmid><doi>10.1016/j.vprsr.2021.100563</doi><tpages>1</tpages></addata></record> |
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subjects | Animals Bayes Theorem Bayesian modeling Buffaloes Carriers Cattle Indirect fluorescent antibody test Latent Class Analysis Percutaneous Coronary Intervention - veterinary Polymerase Chain Reaction - veterinary Sensitivity Specificity Theileria annulata - genetics Tropical theileriosis |
title | Sensitivity and specificity of piroplasm indirect fluorescent antibody test and PCR for Theileria annulata infection in clinically asymptomatic large ruminants using Bayesian latent class analysis |
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