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Availability of HLA-allele-matched unrelated donors and registry size: Estimation from haplotype frequency in the Italian population
In Italy, an HLA-matched unrelated donor is currently the primary donor when a HLA matched sibling is not found for allogeneic haematopoietic stem cell transplantation (HSCT). Better outcomes for transplantation require optimal matching between donor and recipient at least at the HLA-A, -B, -C, and...
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Published in: | Human immunology 2021-10, Vol.82 (10), p.758-766 |
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creator | Sacchi, N. Ciceri, F. Bonifazi, F. Algeri, M. Gallina, A. Pollichieni, S. Raggio, E. Hadj-Amar, B. Lombardini, L. Pupella, S. Liumbruno, G. Cardillo, M. |
description | In Italy, an HLA-matched unrelated donor is currently the primary donor when a HLA matched sibling is not found for allogeneic haematopoietic stem cell transplantation (HSCT). Better outcomes for transplantation require optimal matching between donor and recipient at least at the HLA-A, -B, -C, and -DRB1 loci; therefore, the availability of HLA-matched unrelated donors is important. The enormous HLA polymorphism has always necessitated registries with a large number of individuals in order to be able to provide well-matched donors to a substantial percentage of patients. In order to increase the efficiency of the Italian Bone Marrow Donor Registry (IBMDR) in providing Italian patients with a suitable donor, the probability of finding an HLA-A, -B, -C, and -DRB1 allele-matched (8/8) or a single mismatch unrelated donor (7/8) was estimated in this study according to IBMDR size. Using a biostatistical approach based on HLA haplotype frequencies of more than 100,000 Italian donors enrolled in the IBMDR and HLA-typed at high-resolution level, the probability of finding an 8/8 HLA-matched donor was 23.8%; 33.4%; and 41.4% in simulated registry sizes of 200,000; 500,000; and 1,000,000 donors; respectively. More than 2 million recruited donors are needed to increase the likelihood of identifying an HLA 8/8 matched donor for 50% of Italian patients.
If one single mismatch at HLA I class loci was accepted, the probability of finding a 7/8 HLA-matched donor was 62.8%; 73.7%; and 80.3% in 200,000 donors; 500,000; and 1,000,000 donors; respectively.
Using the regional haplotype frequencies of IBMDR donors, the probability of recruiting a donor with a new HLA phenotype, in the different Italian regions, was also calculated. Our findings are highly relevant in estimating the optimal size of the national registry, in planning a cost-effective strategy for donor recruitment in Italy, and determining the regional priority setting of recruitment activity in order to increase the phenotypic variability of IBMDR as well as its efficiency. |
doi_str_mv | 10.1016/j.humimm.2021.07.012 |
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If one single mismatch at HLA I class loci was accepted, the probability of finding a 7/8 HLA-matched donor was 62.8%; 73.7%; and 80.3% in 200,000 donors; 500,000; and 1,000,000 donors; respectively.
Using the regional haplotype frequencies of IBMDR donors, the probability of recruiting a donor with a new HLA phenotype, in the different Italian regions, was also calculated. Our findings are highly relevant in estimating the optimal size of the national registry, in planning a cost-effective strategy for donor recruitment in Italy, and determining the regional priority setting of recruitment activity in order to increase the phenotypic variability of IBMDR as well as its efficiency.</description><identifier>ISSN: 0198-8859</identifier><identifier>EISSN: 1879-1166</identifier><identifier>DOI: 10.1016/j.humimm.2021.07.012</identifier><identifier>PMID: 34353675</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Algorithms ; Alleles ; Donor- patient matching ; Gene Frequency ; Genetics, Population ; Haplotype frequency ; Haplotypes ; Hematopoietic Stem Cell Transplantation ; Histocompatibility Testing - methods ; HLA alleles ; HLA Antigens - genetics ; Humans ; Italy ; Likelihood Functions ; Matching probability ; Models, Theoretical ; Probability ; Registries ; Tissue Donors ; Unrelated donor registry ; Unrelated Donors</subject><ispartof>Human immunology, 2021-10, Vol.82 (10), p.758-766</ispartof><rights>2021 The Author(s)</rights><rights>Copyright © 2021 The Author(s). Published by Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c408t-606aece74854d92eea5ea847ba53a07d7d06ccb0f33f553a798270e3de6010653</citedby><cites>FETCH-LOGICAL-c408t-606aece74854d92eea5ea847ba53a07d7d06ccb0f33f553a798270e3de6010653</cites><orcidid>0000-0002-2265-0712 ; 0000-0002-7164-401X ; 0000-0002-5356-6003 ; 0000-0001-6633-6007</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34353675$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sacchi, N.</creatorcontrib><creatorcontrib>Ciceri, F.</creatorcontrib><creatorcontrib>Bonifazi, F.</creatorcontrib><creatorcontrib>Algeri, M.</creatorcontrib><creatorcontrib>Gallina, A.</creatorcontrib><creatorcontrib>Pollichieni, S.</creatorcontrib><creatorcontrib>Raggio, E.</creatorcontrib><creatorcontrib>Hadj-Amar, B.</creatorcontrib><creatorcontrib>Lombardini, L.</creatorcontrib><creatorcontrib>Pupella, S.</creatorcontrib><creatorcontrib>Liumbruno, G.</creatorcontrib><creatorcontrib>Cardillo, M.</creatorcontrib><title>Availability of HLA-allele-matched unrelated donors and registry size: Estimation from haplotype frequency in the Italian population</title><title>Human immunology</title><addtitle>Hum Immunol</addtitle><description>In Italy, an HLA-matched unrelated donor is currently the primary donor when a HLA matched sibling is not found for allogeneic haematopoietic stem cell transplantation (HSCT). Better outcomes for transplantation require optimal matching between donor and recipient at least at the HLA-A, -B, -C, and -DRB1 loci; therefore, the availability of HLA-matched unrelated donors is important. The enormous HLA polymorphism has always necessitated registries with a large number of individuals in order to be able to provide well-matched donors to a substantial percentage of patients. In order to increase the efficiency of the Italian Bone Marrow Donor Registry (IBMDR) in providing Italian patients with a suitable donor, the probability of finding an HLA-A, -B, -C, and -DRB1 allele-matched (8/8) or a single mismatch unrelated donor (7/8) was estimated in this study according to IBMDR size. Using a biostatistical approach based on HLA haplotype frequencies of more than 100,000 Italian donors enrolled in the IBMDR and HLA-typed at high-resolution level, the probability of finding an 8/8 HLA-matched donor was 23.8%; 33.4%; and 41.4% in simulated registry sizes of 200,000; 500,000; and 1,000,000 donors; respectively. More than 2 million recruited donors are needed to increase the likelihood of identifying an HLA 8/8 matched donor for 50% of Italian patients.
If one single mismatch at HLA I class loci was accepted, the probability of finding a 7/8 HLA-matched donor was 62.8%; 73.7%; and 80.3% in 200,000 donors; 500,000; and 1,000,000 donors; respectively.
Using the regional haplotype frequencies of IBMDR donors, the probability of recruiting a donor with a new HLA phenotype, in the different Italian regions, was also calculated. Our findings are highly relevant in estimating the optimal size of the national registry, in planning a cost-effective strategy for donor recruitment in Italy, and determining the regional priority setting of recruitment activity in order to increase the phenotypic variability of IBMDR as well as its efficiency.</description><subject>Algorithms</subject><subject>Alleles</subject><subject>Donor- patient matching</subject><subject>Gene Frequency</subject><subject>Genetics, Population</subject><subject>Haplotype frequency</subject><subject>Haplotypes</subject><subject>Hematopoietic Stem Cell Transplantation</subject><subject>Histocompatibility Testing - methods</subject><subject>HLA alleles</subject><subject>HLA Antigens - genetics</subject><subject>Humans</subject><subject>Italy</subject><subject>Likelihood Functions</subject><subject>Matching probability</subject><subject>Models, Theoretical</subject><subject>Probability</subject><subject>Registries</subject><subject>Tissue Donors</subject><subject>Unrelated donor registry</subject><subject>Unrelated Donors</subject><issn>0198-8859</issn><issn>1879-1166</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp9kMFu1DAQhi0EotvCGyDkI5cs4yS2Ew5Iq6q0lVbiAmfLa09Yr5w42E6l9MyD47KFIyfbo-_3zHyEvGOwZcDEx9P2uIxuHLc11GwLcgusfkE2rJN9xZgQL8kGWN9VXcf7C3KZ0gkAJMj2Nblo2oY3QvIN-bV70M7rg_MurzQM9G6_q7T36LEadTZHtHSZInqdy82GKcRE9WRpxB8u5bjS5B7xE71J2RXehYkOMYz0qGcf8jpjeeLPBSezUjfRfER6n7V3eqJzmBf_J_KGvBq0T_j2-bwi37_cfLu-q_Zfb--vd_vKtNDlSoDQaFC2HW9tXyNqjrpr5UHzRoO00oIw5gBD0wy8lGTf1RKwsSiAgeDNFflw_neOocyUshpdMui9njAsSdWc921TC1EXtD2jJoaUIg5qjmXBuCoG6sm_Oqmzf_XkX4FUxX-JvX_usBxGtP9Cf4UX4PMZwLLng8OoknHFDloX0WRlg_t_h98Tpps_</recordid><startdate>202110</startdate><enddate>202110</enddate><creator>Sacchi, N.</creator><creator>Ciceri, F.</creator><creator>Bonifazi, F.</creator><creator>Algeri, M.</creator><creator>Gallina, A.</creator><creator>Pollichieni, S.</creator><creator>Raggio, E.</creator><creator>Hadj-Amar, B.</creator><creator>Lombardini, L.</creator><creator>Pupella, S.</creator><creator>Liumbruno, G.</creator><creator>Cardillo, M.</creator><general>Elsevier Inc</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-2265-0712</orcidid><orcidid>https://orcid.org/0000-0002-7164-401X</orcidid><orcidid>https://orcid.org/0000-0002-5356-6003</orcidid><orcidid>https://orcid.org/0000-0001-6633-6007</orcidid></search><sort><creationdate>202110</creationdate><title>Availability of HLA-allele-matched unrelated donors and registry size: Estimation from haplotype frequency in the Italian population</title><author>Sacchi, N. ; Ciceri, F. ; Bonifazi, F. ; Algeri, M. ; Gallina, A. ; Pollichieni, S. ; Raggio, E. ; Hadj-Amar, B. ; Lombardini, L. ; Pupella, S. ; Liumbruno, G. ; Cardillo, M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c408t-606aece74854d92eea5ea847ba53a07d7d06ccb0f33f553a798270e3de6010653</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Algorithms</topic><topic>Alleles</topic><topic>Donor- patient matching</topic><topic>Gene Frequency</topic><topic>Genetics, Population</topic><topic>Haplotype frequency</topic><topic>Haplotypes</topic><topic>Hematopoietic Stem Cell Transplantation</topic><topic>Histocompatibility Testing - methods</topic><topic>HLA alleles</topic><topic>HLA Antigens - genetics</topic><topic>Humans</topic><topic>Italy</topic><topic>Likelihood Functions</topic><topic>Matching probability</topic><topic>Models, Theoretical</topic><topic>Probability</topic><topic>Registries</topic><topic>Tissue Donors</topic><topic>Unrelated donor registry</topic><topic>Unrelated Donors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sacchi, N.</creatorcontrib><creatorcontrib>Ciceri, F.</creatorcontrib><creatorcontrib>Bonifazi, F.</creatorcontrib><creatorcontrib>Algeri, M.</creatorcontrib><creatorcontrib>Gallina, A.</creatorcontrib><creatorcontrib>Pollichieni, S.</creatorcontrib><creatorcontrib>Raggio, E.</creatorcontrib><creatorcontrib>Hadj-Amar, B.</creatorcontrib><creatorcontrib>Lombardini, L.</creatorcontrib><creatorcontrib>Pupella, S.</creatorcontrib><creatorcontrib>Liumbruno, G.</creatorcontrib><creatorcontrib>Cardillo, M.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Human immunology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sacchi, N.</au><au>Ciceri, F.</au><au>Bonifazi, F.</au><au>Algeri, M.</au><au>Gallina, A.</au><au>Pollichieni, S.</au><au>Raggio, E.</au><au>Hadj-Amar, B.</au><au>Lombardini, L.</au><au>Pupella, S.</au><au>Liumbruno, G.</au><au>Cardillo, M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Availability of HLA-allele-matched unrelated donors and registry size: Estimation from haplotype frequency in the Italian population</atitle><jtitle>Human immunology</jtitle><addtitle>Hum Immunol</addtitle><date>2021-10</date><risdate>2021</risdate><volume>82</volume><issue>10</issue><spage>758</spage><epage>766</epage><pages>758-766</pages><issn>0198-8859</issn><eissn>1879-1166</eissn><abstract>In Italy, an HLA-matched unrelated donor is currently the primary donor when a HLA matched sibling is not found for allogeneic haematopoietic stem cell transplantation (HSCT). Better outcomes for transplantation require optimal matching between donor and recipient at least at the HLA-A, -B, -C, and -DRB1 loci; therefore, the availability of HLA-matched unrelated donors is important. The enormous HLA polymorphism has always necessitated registries with a large number of individuals in order to be able to provide well-matched donors to a substantial percentage of patients. In order to increase the efficiency of the Italian Bone Marrow Donor Registry (IBMDR) in providing Italian patients with a suitable donor, the probability of finding an HLA-A, -B, -C, and -DRB1 allele-matched (8/8) or a single mismatch unrelated donor (7/8) was estimated in this study according to IBMDR size. Using a biostatistical approach based on HLA haplotype frequencies of more than 100,000 Italian donors enrolled in the IBMDR and HLA-typed at high-resolution level, the probability of finding an 8/8 HLA-matched donor was 23.8%; 33.4%; and 41.4% in simulated registry sizes of 200,000; 500,000; and 1,000,000 donors; respectively. More than 2 million recruited donors are needed to increase the likelihood of identifying an HLA 8/8 matched donor for 50% of Italian patients.
If one single mismatch at HLA I class loci was accepted, the probability of finding a 7/8 HLA-matched donor was 62.8%; 73.7%; and 80.3% in 200,000 donors; 500,000; and 1,000,000 donors; respectively.
Using the regional haplotype frequencies of IBMDR donors, the probability of recruiting a donor with a new HLA phenotype, in the different Italian regions, was also calculated. Our findings are highly relevant in estimating the optimal size of the national registry, in planning a cost-effective strategy for donor recruitment in Italy, and determining the regional priority setting of recruitment activity in order to increase the phenotypic variability of IBMDR as well as its efficiency.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>34353675</pmid><doi>10.1016/j.humimm.2021.07.012</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0002-2265-0712</orcidid><orcidid>https://orcid.org/0000-0002-7164-401X</orcidid><orcidid>https://orcid.org/0000-0002-5356-6003</orcidid><orcidid>https://orcid.org/0000-0001-6633-6007</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Algorithms Alleles Donor- patient matching Gene Frequency Genetics, Population Haplotype frequency Haplotypes Hematopoietic Stem Cell Transplantation Histocompatibility Testing - methods HLA alleles HLA Antigens - genetics Humans Italy Likelihood Functions Matching probability Models, Theoretical Probability Registries Tissue Donors Unrelated donor registry Unrelated Donors |
title | Availability of HLA-allele-matched unrelated donors and registry size: Estimation from haplotype frequency in the Italian population |
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