Transboundary introduction of potato-infecting Ralstonia solanacearum in the Andaman Islands revealed by multilocus sequence typing: A potential threat to island agriculture

• Published in: Journal of biosciences 2021-09, Vol.46 (3), Article 80
• Main Authors: Sakthivel, K, Balamurugan, A, Ashajyothi, M, Yadav, Soobedar, Baskaran, V, Abirami, K, Gautam, R K, Kumar, A
• Format: Article
• Language: English
• Subjects: Aetiology; Agricultural research; Agriculture; Alleles; Bacteria; Biomedical and Life Sciences; Biomedicine; Brief Communication; Cell Biology; Colonies; Crop diseases; DNA; Etiology; Exudation; Farming; Farms; Flowers & plants; Gene sequencing; Genes; Host plants; Host range; India; Inoculation; Islands; Life Sciences; Microbiological strains; Microbiology; Multilocus Sequence Typing; Nucleotide sequence; Pathogens; PCR; Phylogeny; Plant Diseases - microbiology; Plant pathology; Plant Sciences; Potatoes; Race; Ralstonia solanacearum; Ralstonia solanacearum - genetics; Ralstonia solanacearum - isolation & purification; Research centers; rRNA 16S; Sequencing; Signs and symptoms; Solanum melongena; Solanum tuberosum - microbiology; Species classification; Strains (organisms); Symptoms; Tomatoes; Wilt; Wilting; Yellowing; Zoology
• ISSN: 0250-5991; 0973-7138
• DOI: 10.1007/s12038-021-00195-x

Wilting of potato plants with an incidence of 20–30 % was observed for the first time in the agricultural farms of Andaman Islands, India. The infected plants showed wilting syndrome that included downward drooping of leaves, yellowing, and collapse of the entire plants. Characteristic milky-white exudate from the infected stem indicated bacterial etiology of the disease. Upon streaking onto 2, 3, 5 triphenyl-tetrazolium chloride amended nutrient medium, the bacterial exudate yielded characteristic creamy-white, fluidal, irregular colonies with the pink center. Upon inoculation, the randomly picked bacterial colonies, AN_PRSGr and AN_PRSCh, representing the two locations, incited wilt symptoms on one-month-old potato plants. The host range studies revealed that the isolates were pathogenic on tomato and eggplant but non-pathogenic to chili and Solanum torvum (wild eggplant). The 16S rRNA gene sequencing and the Ralstonia -specific PCR test confirmed the identity of AN_PRSGr and AN_PRSCh as Ralstonia solanacearum . Intra-species level classification revealed their identity as strains of race 1, biovar 3, and phylotype-I. Multilocus sequence typing (MLST)-based in-depth sequence alignment for phylogenetic analysis revealed the isolates AN_PRSGr and AN_PRSCh clustered with two mainland race 1/biovar 3/phylotype-I isolates of Kerala, India. However, the allelic profile-based goeBURST-analysis placed them as singletons in the global collection of Ralstonia solanacearum , conforming intra-racial/ intra-phylotype diversity within race 1/biovar3/phylotype-I strains. The molecular characterization by MLST revealed that the isolates shared several alleles with isolates reported from mainland India suggesting the transboundary movement of the pathogen, its introduction, and subsequent spread in the island.