The Fodder Legume Chamaecytisus albidus Establishes Functional Symbiosis with Different Bradyrhizobial Symbiovars in Morocco

• Published in: Microbial ecology 2022-10, Vol.84 (3), p.794-807
• Main Authors: Bouhnik, Omar, Alami, Soufiane, Lamin, Hanane, Lamrabet, Mouad, Bennis, Meryeme, Ouajdi, Mohammed, Bellaka, Mhammed, Antri, Salwa El, Abbas, Younes, Abdelmoumen, Hanaa, Bedmar, Eulogio J., Idrissi, Mustapha Missbah El
• Format: Article
• Language: English
• Subjects: Agroforestry; Amino acids; Analysis; Biomedical and Life Sciences; Bradyrhizobium; Carbohydrates; DNA fingerprinting; Drought; Ecology; Fingerprinting; Fodder; Gene sequencing; Genes; Geoecology/Natural Processes; Glycine (amino acid); Inoculation; Legumes; Life Sciences; Microbial Ecology; Microbiology; Nature Conservation; Nucleotide sequence; PCR; Phylogenetics; Phylogeny; Plant Microbe Interactions; RecA protein; RpoB protein; Rrs gene; Semi arid areas; Sequence analysis; Similarity; Soil; Soils; Symbionts; Symbiosis; Water Quality/Water Pollution
• ISSN: 0095-3628; 1432-184X
• DOI: 10.1007/s00248-021-01888-4

In this work, we analyzed the symbiotic performance and diversity of rhizobial strains isolated from the endemic shrubby legume Chamaecytisus albidus grown in soils of three different agroforestry ecosystems representing arid and semi-arid forest areas in Morocco. The analysis of the rrs gene sequences from twenty-four representative strains selected after REP-PCR fingerprinting showed that all the strains belong to the genus Bradyrhizobium . Following multi-locus sequence analysis (MLSA) using the rrs , gyrB , recA , glnII , and rpoB housekeeping genes , five representative strains, CA20, CA61, CJ2, CB10, and CB61 were selected for further molecular studies. Phylogenetic analysis of the concatenated glnII , gyrB , recA , and rpoB genes showed that the strain CJ2 isolated from Sahel Doukkala soil is close to Bradyrhizobium canariense BTA-1  T (96.95%); that strains CA20 and CA61 isolated from the Amhach site are more related to Bradyrhizobium valentinum LmjM3 T , with 96.40 and 94.57% similarity values; and that the strains CB10 and CB60 isolated from soil in the Bounaga site are more related to Bradyrhizobium murdochi CNPSo 4020  T and Bradyrhizobium. retamae Ro19 T , with which they showed 95.45 and 97.34% similarity values, respectively. The phylogenetic analysis of the symbiotic genes showed that the strains belong to symbiovars lupini, genistearum, and retamae. All the five strains are able to nodulate Lupinus luteus, Retama monosperma , and Cytisus monspessilanus , but they do not nodulate Glycine max and Phaseolus vulgaris . The inoculation tests showed that the strains isolated from the 3 regions improve significantly the plant yield as compared to uninoculated plants. However, the strains of Bradyrhizobium sp. sv. retamae isolated from the site of Amhach were the most performing. The phenotypic analysis showed that the strains are able to use a wide range of carbohydrates and amino acids as sole carbon and nitrogen source. The strains isolated from the arid areas of Bounaga and Amhach were more tolerant to salinity and drought stress than strains isolated in the semi-arid area of Sahel Doukkala.