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Removing the major allergen Bra j I from brown mustard (Brassica juncea) by CRISPR/Cas9
SUMMARY Food allergies are a major health issue worldwide. Modern breeding techniques such as genome editing via CRISPR/Cas9 have the potential to mitigate this by targeting allergens in plants. This study addressed the major allergen Bra j I, a seed storage protein of the 2S albumin class, in the a...
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Published in: | The Plant journal : for cell and molecular biology 2022-02, Vol.109 (3), p.649-663 |
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description | SUMMARY
Food allergies are a major health issue worldwide. Modern breeding techniques such as genome editing via CRISPR/Cas9 have the potential to mitigate this by targeting allergens in plants. This study addressed the major allergen Bra j I, a seed storage protein of the 2S albumin class, in the allotetraploid brown mustard (Brassica juncea). Cotyledon explants of an Indian gene bank accession (CR2664) and the German variety Terratop were transformed using Agrobacterium tumefaciens harboring binary vectors with multiple single guide RNAs to induce either large deletions or frameshift mutations in both Bra j I homoeologs. A total of 49 T0 lines were obtained with up to 3.8% transformation efficiency. Four lines had large deletions of 566 up to 790 bp in the Bra j IB allele. Among 18 Terratop T0 lines, nine carried indels in the targeted regions. From 16 analyzed CR2664 T0 lines, 14 held indels and three had all four Bra j I alleles mutated. The majority of the CRISPR/Cas9‐induced mutations were heritable to T1 progenies. In some edited lines, seed formation and viability were reduced and seeds showed a precocious development of the embryo leading to a rupture of the testa already in the siliques. Immunoblotting using newly developed Bra j I‐specific antibodies revealed the amount of Bra j I protein to be reduced or absent in seed extracts of selected lines. Removing an allergenic determinant from mustard is an important first step towards the development of safer food crops.
Significance Statement
Mustard is a significant elicitor of allergic reactions to food. The major allergen in brown mustard (Brassica juncea) is Bra j I, a 2S albumin seed storage protein. This is the first report of genome editing in B. juncea, and we mutated up to all four gene copies in this tetraploid plant resulting in plants with reduced levels or absence of Bra j I protein. |
doi_str_mv | 10.1111/tpj.15584 |
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Food allergies are a major health issue worldwide. Modern breeding techniques such as genome editing via CRISPR/Cas9 have the potential to mitigate this by targeting allergens in plants. This study addressed the major allergen Bra j I, a seed storage protein of the 2S albumin class, in the allotetraploid brown mustard (Brassica juncea). Cotyledon explants of an Indian gene bank accession (CR2664) and the German variety Terratop were transformed using Agrobacterium tumefaciens harboring binary vectors with multiple single guide RNAs to induce either large deletions or frameshift mutations in both Bra j I homoeologs. A total of 49 T0 lines were obtained with up to 3.8% transformation efficiency. Four lines had large deletions of 566 up to 790 bp in the Bra j IB allele. Among 18 Terratop T0 lines, nine carried indels in the targeted regions. From 16 analyzed CR2664 T0 lines, 14 held indels and three had all four Bra j I alleles mutated. The majority of the CRISPR/Cas9‐induced mutations were heritable to T1 progenies. In some edited lines, seed formation and viability were reduced and seeds showed a precocious development of the embryo leading to a rupture of the testa already in the siliques. Immunoblotting using newly developed Bra j I‐specific antibodies revealed the amount of Bra j I protein to be reduced or absent in seed extracts of selected lines. Removing an allergenic determinant from mustard is an important first step towards the development of safer food crops.
Significance Statement
Mustard is a significant elicitor of allergic reactions to food. The major allergen in brown mustard (Brassica juncea) is Bra j I, a 2S albumin seed storage protein. This is the first report of genome editing in B. juncea, and we mutated up to all four gene copies in this tetraploid plant resulting in plants with reduced levels or absence of Bra j I protein.</description><identifier>ISSN: 0960-7412</identifier><identifier>EISSN: 1365-313X</identifier><identifier>DOI: 10.1111/tpj.15584</identifier><identifier>PMID: 34784073</identifier><language>eng</language><publisher>England: Blackwell Publishing Ltd</publisher><subject>Agrobacterium tumefaciens ; Albumins ; Alleles ; Allergens ; Allergens - genetics ; Allergies ; Antibodies ; Bra j I ; Brassica ; Brassica juncea ; Breeding methods ; CRISPR ; CRISPR-Cas Systems ; CRISPR/Cas ; Crops, Agricultural - chemistry ; Crops, Agricultural - genetics ; Explants ; food allergen ; Food allergies ; Food Hypersensitivity - prevention & control ; Frameshift mutation ; Gene banks ; Gene Editing - methods ; Genes, Plant ; Genetic transformation ; Genetic Variation ; Genome editing ; Genomes ; Genotype ; Immunoblotting ; Mustard ; Mustard Plant - genetics ; Mutation ; Plant Breeding - methods ; Plants, Genetically Modified ; Proteins ; seed storage protein ; Seed Storage Proteins - chemistry ; Seed Storage Proteins - genetics ; Seeds ; transformation ; Transformation, Genetic</subject><ispartof>The Plant journal : for cell and molecular biology, 2022-02, Vol.109 (3), p.649-663</ispartof><rights>2021 The Authors. published by Society for Experimental Biology and John Wiley & Sons Ltd.</rights><rights>2021 The Authors. The Plant Journal published by Society for Experimental Biology and John Wiley & Sons Ltd.</rights><rights>2021. This article is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3884-2e24033afe869632027ea6942a63238f3dd647e730080700f96848a03db1e6d53</citedby><cites>FETCH-LOGICAL-c3884-2e24033afe869632027ea6942a63238f3dd647e730080700f96848a03db1e6d53</cites><orcidid>0000-0003-3418-6045 ; 0000-0001-5883-7506 ; 0000-0001-6492-9212 ; 0000-0002-8487-9301 ; 0000-0001-9808-4043 ; 0000-0002-4860-1097 ; 0000-0001-8559-954X ; 0000-0002-2509-1418</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34784073$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Assou, Juvenal</creatorcontrib><creatorcontrib>Zhang, Dingbo</creatorcontrib><creatorcontrib>Roth, Kristian D. R.</creatorcontrib><creatorcontrib>Steinke, Stephan</creatorcontrib><creatorcontrib>Hust, Michael</creatorcontrib><creatorcontrib>Reinard, Thomas</creatorcontrib><creatorcontrib>Winkelmann, Traud</creatorcontrib><creatorcontrib>Boch, Jens</creatorcontrib><title>Removing the major allergen Bra j I from brown mustard (Brassica juncea) by CRISPR/Cas9</title><title>The Plant journal : for cell and molecular biology</title><addtitle>Plant J</addtitle><description>SUMMARY
Food allergies are a major health issue worldwide. Modern breeding techniques such as genome editing via CRISPR/Cas9 have the potential to mitigate this by targeting allergens in plants. This study addressed the major allergen Bra j I, a seed storage protein of the 2S albumin class, in the allotetraploid brown mustard (Brassica juncea). Cotyledon explants of an Indian gene bank accession (CR2664) and the German variety Terratop were transformed using Agrobacterium tumefaciens harboring binary vectors with multiple single guide RNAs to induce either large deletions or frameshift mutations in both Bra j I homoeologs. A total of 49 T0 lines were obtained with up to 3.8% transformation efficiency. Four lines had large deletions of 566 up to 790 bp in the Bra j IB allele. Among 18 Terratop T0 lines, nine carried indels in the targeted regions. From 16 analyzed CR2664 T0 lines, 14 held indels and three had all four Bra j I alleles mutated. The majority of the CRISPR/Cas9‐induced mutations were heritable to T1 progenies. In some edited lines, seed formation and viability were reduced and seeds showed a precocious development of the embryo leading to a rupture of the testa already in the siliques. Immunoblotting using newly developed Bra j I‐specific antibodies revealed the amount of Bra j I protein to be reduced or absent in seed extracts of selected lines. Removing an allergenic determinant from mustard is an important first step towards the development of safer food crops.
Significance Statement
Mustard is a significant elicitor of allergic reactions to food. The major allergen in brown mustard (Brassica juncea) is Bra j I, a 2S albumin seed storage protein. This is the first report of genome editing in B. juncea, and we mutated up to all four gene copies in this tetraploid plant resulting in plants with reduced levels or absence of Bra j I protein.</description><subject>Agrobacterium tumefaciens</subject><subject>Albumins</subject><subject>Alleles</subject><subject>Allergens</subject><subject>Allergens - genetics</subject><subject>Allergies</subject><subject>Antibodies</subject><subject>Bra j I</subject><subject>Brassica</subject><subject>Brassica juncea</subject><subject>Breeding methods</subject><subject>CRISPR</subject><subject>CRISPR-Cas Systems</subject><subject>CRISPR/Cas</subject><subject>Crops, Agricultural - chemistry</subject><subject>Crops, Agricultural - genetics</subject><subject>Explants</subject><subject>food allergen</subject><subject>Food allergies</subject><subject>Food Hypersensitivity - prevention & control</subject><subject>Frameshift mutation</subject><subject>Gene banks</subject><subject>Gene Editing - methods</subject><subject>Genes, Plant</subject><subject>Genetic transformation</subject><subject>Genetic Variation</subject><subject>Genome editing</subject><subject>Genomes</subject><subject>Genotype</subject><subject>Immunoblotting</subject><subject>Mustard</subject><subject>Mustard Plant - genetics</subject><subject>Mutation</subject><subject>Plant Breeding - methods</subject><subject>Plants, Genetically Modified</subject><subject>Proteins</subject><subject>seed storage protein</subject><subject>Seed Storage Proteins - chemistry</subject><subject>Seed Storage Proteins - genetics</subject><subject>Seeds</subject><subject>transformation</subject><subject>Transformation, Genetic</subject><issn>0960-7412</issn><issn>1365-313X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><recordid>eNp10MtO4zAUBmALMYJyWfACyBKbsgi1fRzbWUI1QEdIoAKCneUmJ5Aol2I3g_r2YyjDYqTxxrL8nV9HPyFHnJ3xeCarZX3G09TILTLioNIEODxvkxHLFEu05GKX7IVQM8Y1KLlDdkFqI5mGEXmaY9v_rroXunpF2rq699Q1DfoX7OiFd7SmM1r6vqUL3793tB3CyvmCjuNfCFUewdDl6E7pYk2n89n93XwydSE7ID9K1wQ8_Lr3yePlz4fpdXJzezWbnt8kORgjE4FCMgBXolGZAsGERqcyKVx8gCmhKJTUqIExwzRjZaaMNI5BseCoihT2yXiTu_T924BhZdsq5Ng0rsN-CFakWRzMwKhIT_6hdT_4Lm5nhRKQKm1SGdXpRuW-D8FjaZe-ap1fW87sR9s2tm0_2472-CtxWLRYfMu_9UYw2YD3qsH1_5Psw92vTeQfFayFIA</recordid><startdate>202202</startdate><enddate>202202</enddate><creator>Assou, Juvenal</creator><creator>Zhang, Dingbo</creator><creator>Roth, Kristian D. R.</creator><creator>Steinke, Stephan</creator><creator>Hust, Michael</creator><creator>Reinard, Thomas</creator><creator>Winkelmann, Traud</creator><creator>Boch, Jens</creator><general>Blackwell Publishing Ltd</general><scope>24P</scope><scope>WIN</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7QP</scope><scope>7QR</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-3418-6045</orcidid><orcidid>https://orcid.org/0000-0001-5883-7506</orcidid><orcidid>https://orcid.org/0000-0001-6492-9212</orcidid><orcidid>https://orcid.org/0000-0002-8487-9301</orcidid><orcidid>https://orcid.org/0000-0001-9808-4043</orcidid><orcidid>https://orcid.org/0000-0002-4860-1097</orcidid><orcidid>https://orcid.org/0000-0001-8559-954X</orcidid><orcidid>https://orcid.org/0000-0002-2509-1418</orcidid></search><sort><creationdate>202202</creationdate><title>Removing the major allergen Bra j I from brown mustard (Brassica juncea) by CRISPR/Cas9</title><author>Assou, Juvenal ; Zhang, Dingbo ; Roth, Kristian D. R. ; Steinke, Stephan ; Hust, Michael ; Reinard, Thomas ; Winkelmann, Traud ; Boch, Jens</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3884-2e24033afe869632027ea6942a63238f3dd647e730080700f96848a03db1e6d53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Agrobacterium tumefaciens</topic><topic>Albumins</topic><topic>Alleles</topic><topic>Allergens</topic><topic>Allergens - genetics</topic><topic>Allergies</topic><topic>Antibodies</topic><topic>Bra j I</topic><topic>Brassica</topic><topic>Brassica juncea</topic><topic>Breeding methods</topic><topic>CRISPR</topic><topic>CRISPR-Cas Systems</topic><topic>CRISPR/Cas</topic><topic>Crops, Agricultural - chemistry</topic><topic>Crops, Agricultural - genetics</topic><topic>Explants</topic><topic>food allergen</topic><topic>Food allergies</topic><topic>Food Hypersensitivity - prevention & control</topic><topic>Frameshift mutation</topic><topic>Gene banks</topic><topic>Gene Editing - methods</topic><topic>Genes, Plant</topic><topic>Genetic transformation</topic><topic>Genetic Variation</topic><topic>Genome editing</topic><topic>Genomes</topic><topic>Genotype</topic><topic>Immunoblotting</topic><topic>Mustard</topic><topic>Mustard Plant - genetics</topic><topic>Mutation</topic><topic>Plant Breeding - methods</topic><topic>Plants, Genetically Modified</topic><topic>Proteins</topic><topic>seed storage protein</topic><topic>Seed Storage Proteins - chemistry</topic><topic>Seed Storage Proteins - genetics</topic><topic>Seeds</topic><topic>transformation</topic><topic>Transformation, Genetic</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Assou, Juvenal</creatorcontrib><creatorcontrib>Zhang, Dingbo</creatorcontrib><creatorcontrib>Roth, Kristian D. R.</creatorcontrib><creatorcontrib>Steinke, Stephan</creatorcontrib><creatorcontrib>Hust, Michael</creatorcontrib><creatorcontrib>Reinard, Thomas</creatorcontrib><creatorcontrib>Winkelmann, Traud</creatorcontrib><creatorcontrib>Boch, Jens</creatorcontrib><collection>Wiley Online Library Open Access</collection><collection>Wiley Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>The Plant journal : for cell and molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Assou, Juvenal</au><au>Zhang, Dingbo</au><au>Roth, Kristian D. R.</au><au>Steinke, Stephan</au><au>Hust, Michael</au><au>Reinard, Thomas</au><au>Winkelmann, Traud</au><au>Boch, Jens</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Removing the major allergen Bra j I from brown mustard (Brassica juncea) by CRISPR/Cas9</atitle><jtitle>The Plant journal : for cell and molecular biology</jtitle><addtitle>Plant J</addtitle><date>2022-02</date><risdate>2022</risdate><volume>109</volume><issue>3</issue><spage>649</spage><epage>663</epage><pages>649-663</pages><issn>0960-7412</issn><eissn>1365-313X</eissn><abstract>SUMMARY
Food allergies are a major health issue worldwide. Modern breeding techniques such as genome editing via CRISPR/Cas9 have the potential to mitigate this by targeting allergens in plants. This study addressed the major allergen Bra j I, a seed storage protein of the 2S albumin class, in the allotetraploid brown mustard (Brassica juncea). Cotyledon explants of an Indian gene bank accession (CR2664) and the German variety Terratop were transformed using Agrobacterium tumefaciens harboring binary vectors with multiple single guide RNAs to induce either large deletions or frameshift mutations in both Bra j I homoeologs. A total of 49 T0 lines were obtained with up to 3.8% transformation efficiency. Four lines had large deletions of 566 up to 790 bp in the Bra j IB allele. Among 18 Terratop T0 lines, nine carried indels in the targeted regions. From 16 analyzed CR2664 T0 lines, 14 held indels and three had all four Bra j I alleles mutated. The majority of the CRISPR/Cas9‐induced mutations were heritable to T1 progenies. In some edited lines, seed formation and viability were reduced and seeds showed a precocious development of the embryo leading to a rupture of the testa already in the siliques. Immunoblotting using newly developed Bra j I‐specific antibodies revealed the amount of Bra j I protein to be reduced or absent in seed extracts of selected lines. Removing an allergenic determinant from mustard is an important first step towards the development of safer food crops.
Significance Statement
Mustard is a significant elicitor of allergic reactions to food. The major allergen in brown mustard (Brassica juncea) is Bra j I, a 2S albumin seed storage protein. This is the first report of genome editing in B. juncea, and we mutated up to all four gene copies in this tetraploid plant resulting in plants with reduced levels or absence of Bra j I protein.</abstract><cop>England</cop><pub>Blackwell Publishing Ltd</pub><pmid>34784073</pmid><doi>10.1111/tpj.15584</doi><tpages>663</tpages><orcidid>https://orcid.org/0000-0003-3418-6045</orcidid><orcidid>https://orcid.org/0000-0001-5883-7506</orcidid><orcidid>https://orcid.org/0000-0001-6492-9212</orcidid><orcidid>https://orcid.org/0000-0002-8487-9301</orcidid><orcidid>https://orcid.org/0000-0001-9808-4043</orcidid><orcidid>https://orcid.org/0000-0002-4860-1097</orcidid><orcidid>https://orcid.org/0000-0001-8559-954X</orcidid><orcidid>https://orcid.org/0000-0002-2509-1418</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Agrobacterium tumefaciens Albumins Alleles Allergens Allergens - genetics Allergies Antibodies Bra j I Brassica Brassica juncea Breeding methods CRISPR CRISPR-Cas Systems CRISPR/Cas Crops, Agricultural - chemistry Crops, Agricultural - genetics Explants food allergen Food allergies Food Hypersensitivity - prevention & control Frameshift mutation Gene banks Gene Editing - methods Genes, Plant Genetic transformation Genetic Variation Genome editing Genomes Genotype Immunoblotting Mustard Mustard Plant - genetics Mutation Plant Breeding - methods Plants, Genetically Modified Proteins seed storage protein Seed Storage Proteins - chemistry Seed Storage Proteins - genetics Seeds transformation Transformation, Genetic |
title | Removing the major allergen Bra j I from brown mustard (Brassica juncea) by CRISPR/Cas9 |
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