Comparative proteomic analysis of spleen reveals key immune-related proteins in the yak (Bos grunniens) at different growth stages

• Published in: Comparative biochemistry and physiology. Part D, Genomics & proteomics Genomics & proteomics, 2022-06, Vol.42, p.100968-100968, Article 100968
• Main Authors: Zheng, Yao, Guan, Jiuqiang, Wang, Li, Luo, Xiaolin, Zhang, Xiangfei
• Format: Article
• Language: English
• Subjects: Animals; Cattle; Genome; Immune function; Maiwa yak; Plateau adaptability; Proteome; Proteomics; Signaling pathway; Spleen; Tandem mass tag quantification; TNF Receptor-Associated Factor 1
• ISSN: 1744-117X; 1878-0407
• DOI: 10.1016/j.cbd.2022.100968

Spleen plays an indispensable role in the immune system as the largest lymphatic organ in the body. The spleens of yaks at three developmental stages (1 day fetal yak, 15 months juvenile yak and 5 years old adult yak) were sampled and the Tandem mass tag (TMT) quantification method was employed in spleen proteomic analysis. The results showed that 6576 proteins and 529 differentially expressed proteins (DEPs) were identified in the yak spleens at three growth stages. Gene ontology (GO) analysis of DEPs indicated that DEPs were enriched in Oxygen transport, Actin filament movement, DNA replication, Cell cycle process, and Cell macromolecule biosynthesis process, which was conducive to high altitude breathing, protein synthesis and organ growth in yaks. These were indispensable for yak spleen growth and cell metabolism, high altitude adaptation. Those DEPs were further analyzed based on Kyoto encyclopedia of genes and genomes (KEGG) pathways, which principally participated in Th1 and Th2 cell differentiation, NF-kappa B signaling pathway, Phagosome, and Glutathione metabolism. Those pathways were associated with some animal life activities in defense against microbial antigens, indicating that with age, the immune function of the yak's spleen continued to increase. Hemoglobin, Tumor necrosis factor receptor associated factor 1 (TRAF1), T cell receptor (TCR), Macrophage receptor, Fc receptors (FcR), and Gamma-glutamyl transferase (GGT) of DEPs played roles in immune function in yak spleen directly or indirectly. The dynamic changes of Toll like receptor 2 (TLR2), TRAF1 and Heat shock protein 27 (HSP27 or HSPB1) detected by Immunohistochemistry were consistent with those obtained from TMT proteomic. In conclusion, this study provides extensive and functional analyses of the spleen proteome at three developmental stages and will offer a new insight into key proteins involved in the immune function of yak spleen. [Display omitted] •Proteomic analysis of yak spleen at different developmental stages by TMT method•Biological pathways for plateau adaptation and PPI networks were identified.•Screened a group of immune-related DEPs about the adaptability of yak to plateau.•Some DEPs identified by TMT were validated through immunohistochemical analysis.