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Rapid segmentation and sensitive analysis of CRP with paper-based microfluidic device using machine learning
Microfluidic paper-based analytical devices (μPADs) have been widely used in point-of-care testing owing to their simple operation, low volume of the sample required, and the lack of the need for an external force. To obtain accurate semi-quantitative or quantitative results, μPADs need to respond t...
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Published in: | Analytical and bioanalytical chemistry 2022-05, Vol.414 (13), p.3959-3970 |
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description | Microfluidic paper-based analytical devices (μPADs) have been widely used in point-of-care testing owing to their simple operation, low volume of the sample required, and the lack of the need for an external force. To obtain accurate semi-quantitative or quantitative results, μPADs need to respond to the challenges posed by differences in reaction conditions. In this paper, multi-layer μPADs are fabricated by the imprinting method for the colorimetric detection of C-reactive protein (CRP). Different lighting conditions and shooting angles of scenes are simulated in image acquisition, and the detection-related performance of μPADs is improved by using a machine learning algorithm. The You Only Look Once (YOLO) model is used to identify the areas of reaction in μPADs. This model can observe an image only once to predict the objects present in it and their locations. The YOLO model trained in this study was able to identify all the reaction areas quickly without incurring any error. These reaction areas were categorized by classification algorithms to determine the risk level of CRP concentration. Multi-layer perceptron, convolutional neural network, and residual network algorithms were used for the classification tasks, where the latter yielded the highest accuracy of 96%. It has a promising application prospect in fast recognition and analysis of μPADs.
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doi_str_mv | 10.1007/s00216-022-04039-x |
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Graphical abstract</description><identifier>ISSN: 1618-2642</identifier><identifier>EISSN: 1618-2650</identifier><identifier>DOI: 10.1007/s00216-022-04039-x</identifier><identifier>PMID: 35352162</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Algorithms ; Analytical Chemistry ; Artificial neural networks ; Biochemistry ; C-Reactive Protein ; Characterization and Evaluation of Materials ; Chemistry ; Chemistry and Materials Science ; Classification ; Colorimetry ; Food Science ; Image acquisition ; Image segmentation ; Imprinting ; Lab-On-A-Chip Devices ; Laboratory Medicine ; Learning algorithms ; Machine Learning ; Microfluidic Analytical Techniques ; Microfluidic devices ; Microfluidics ; Monitoring/Environmental Analysis ; Multilayer perceptrons ; Multilayers ; Neural networks ; Research Paper ; Risk levels</subject><ispartof>Analytical and bioanalytical chemistry, 2022-05, Vol.414 (13), p.3959-3970</ispartof><rights>Springer-Verlag GmbH Germany, part of Springer Nature 2022</rights><rights>2022. Springer-Verlag GmbH Germany, part of Springer Nature.</rights><rights>COPYRIGHT 2022 Springer</rights><rights>Springer-Verlag GmbH Germany, part of Springer Nature 2022.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c414t-4d11ef0365a610630fa976f115149a95358d21448285d8fa275b46587ac7de4a3</citedby><cites>FETCH-LOGICAL-c414t-4d11ef0365a610630fa976f115149a95358d21448285d8fa275b46587ac7de4a3</cites><orcidid>0000-0003-3842-9390</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35352162$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ning, Qihong</creatorcontrib><creatorcontrib>Zheng, Wei</creatorcontrib><creatorcontrib>Xu, Hao</creatorcontrib><creatorcontrib>Zhu, Armando</creatorcontrib><creatorcontrib>Li, Tangan</creatorcontrib><creatorcontrib>Cheng, Yuemeng</creatorcontrib><creatorcontrib>Feng, Shaoqing</creatorcontrib><creatorcontrib>Wang, Li</creatorcontrib><creatorcontrib>Cui, Daxiang</creatorcontrib><creatorcontrib>Wang, Kan</creatorcontrib><title>Rapid segmentation and sensitive analysis of CRP with paper-based microfluidic device using machine learning</title><title>Analytical and bioanalytical chemistry</title><addtitle>Anal Bioanal Chem</addtitle><addtitle>Anal Bioanal Chem</addtitle><description>Microfluidic paper-based analytical devices (μPADs) have been widely used in point-of-care testing owing to their simple operation, low volume of the sample required, and the lack of the need for an external force. To obtain accurate semi-quantitative or quantitative results, μPADs need to respond to the challenges posed by differences in reaction conditions. In this paper, multi-layer μPADs are fabricated by the imprinting method for the colorimetric detection of C-reactive protein (CRP). Different lighting conditions and shooting angles of scenes are simulated in image acquisition, and the detection-related performance of μPADs is improved by using a machine learning algorithm. The You Only Look Once (YOLO) model is used to identify the areas of reaction in μPADs. This model can observe an image only once to predict the objects present in it and their locations. The YOLO model trained in this study was able to identify all the reaction areas quickly without incurring any error. These reaction areas were categorized by classification algorithms to determine the risk level of CRP concentration. Multi-layer perceptron, convolutional neural network, and residual network algorithms were used for the classification tasks, where the latter yielded the highest accuracy of 96%. It has a promising application prospect in fast recognition and analysis of μPADs.
Graphical abstract</description><subject>Algorithms</subject><subject>Analytical Chemistry</subject><subject>Artificial neural networks</subject><subject>Biochemistry</subject><subject>C-Reactive Protein</subject><subject>Characterization and Evaluation of Materials</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>Classification</subject><subject>Colorimetry</subject><subject>Food Science</subject><subject>Image acquisition</subject><subject>Image segmentation</subject><subject>Imprinting</subject><subject>Lab-On-A-Chip Devices</subject><subject>Laboratory Medicine</subject><subject>Learning algorithms</subject><subject>Machine Learning</subject><subject>Microfluidic Analytical Techniques</subject><subject>Microfluidic devices</subject><subject>Microfluidics</subject><subject>Monitoring/Environmental Analysis</subject><subject>Multilayer perceptrons</subject><subject>Multilayers</subject><subject>Neural networks</subject><subject>Research 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Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ning, Qihong</au><au>Zheng, Wei</au><au>Xu, Hao</au><au>Zhu, Armando</au><au>Li, Tangan</au><au>Cheng, Yuemeng</au><au>Feng, Shaoqing</au><au>Wang, Li</au><au>Cui, Daxiang</au><au>Wang, Kan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Rapid segmentation and sensitive analysis of CRP with paper-based microfluidic device using machine learning</atitle><jtitle>Analytical and bioanalytical chemistry</jtitle><stitle>Anal Bioanal Chem</stitle><addtitle>Anal Bioanal Chem</addtitle><date>2022-05-01</date><risdate>2022</risdate><volume>414</volume><issue>13</issue><spage>3959</spage><epage>3970</epage><pages>3959-3970</pages><issn>1618-2642</issn><eissn>1618-2650</eissn><abstract>Microfluidic paper-based analytical devices (μPADs) have been widely used in point-of-care testing owing to their simple operation, low volume of the sample required, and the lack of the need for an external force. To obtain accurate semi-quantitative or quantitative results, μPADs need to respond to the challenges posed by differences in reaction conditions. In this paper, multi-layer μPADs are fabricated by the imprinting method for the colorimetric detection of C-reactive protein (CRP). Different lighting conditions and shooting angles of scenes are simulated in image acquisition, and the detection-related performance of μPADs is improved by using a machine learning algorithm. The You Only Look Once (YOLO) model is used to identify the areas of reaction in μPADs. This model can observe an image only once to predict the objects present in it and their locations. The YOLO model trained in this study was able to identify all the reaction areas quickly without incurring any error. These reaction areas were categorized by classification algorithms to determine the risk level of CRP concentration. Multi-layer perceptron, convolutional neural network, and residual network algorithms were used for the classification tasks, where the latter yielded the highest accuracy of 96%. It has a promising application prospect in fast recognition and analysis of μPADs.
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subjects | Algorithms Analytical Chemistry Artificial neural networks Biochemistry C-Reactive Protein Characterization and Evaluation of Materials Chemistry Chemistry and Materials Science Classification Colorimetry Food Science Image acquisition Image segmentation Imprinting Lab-On-A-Chip Devices Laboratory Medicine Learning algorithms Machine Learning Microfluidic Analytical Techniques Microfluidic devices Microfluidics Monitoring/Environmental Analysis Multilayer perceptrons Multilayers Neural networks Research Paper Risk levels |
title | Rapid segmentation and sensitive analysis of CRP with paper-based microfluidic device using machine learning |
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